RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 SUMO4Q6EEV6 95 aa12.36□□□□□ -0.43
PDLIM7-216ENST00000506537 TSKUQ8WUA8 353 aa12.36□□□□□ -0.43
PDLIM7-216ENST00000506537 DPH3P1Q9H4G8 78 aa12.36□□□□□ -0.43
PDLIM7-216ENST00000506537 M0QY20 66 aa12.35□□□□□ -0.43
PDLIM7-216ENST00000506537 TNP2Q05952 138 aa12.35□□□□□ -0.43
PDLIM7-216ENST00000506537 LINC01556Q5JQF7 62 aa12.35□□□□□ -0.43
PDLIM7-216ENST00000506537 Q8N3U1 123 aa12.35□□□□□ -0.43
PDLIM7-216ENST00000506537 TNFRSF18Q9Y5U5 241 aa12.35□□□□□ -0.43
PDLIM7-216ENST00000506537 DYNC1H1Q14204 4646 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-216ENST00000506537 HIGD1CA8MV81 97 aa12.34□□□□□ -0.43
PDLIM7-216ENST00000506537 BTF3P20290 206 aaKnown RBP12.34□□□□□ -0.43
PDLIM7-216ENST00000506537 Q6ZRN7 208 aaPredicted RBP12.34□□□□□ -0.43
PDLIM7-216ENST00000506537 C15orf54Q8N8G6 183 aa12.34□□□□□ -0.43
PDLIM7-216ENST00000506537 GFRA4Q9GZZ7 299 aa12.34□□□□□ -0.43
PDLIM7-216ENST00000506537 A0A087WWC5 75 aa12.32□□□□□ -0.44
PDLIM7-216ENST00000506537 FAM231BA6NCW3 169 aa12.32□□□□□ -0.44
PDLIM7-216ENST00000506537 K7EP13 123 aa12.32□□□□□ -0.44
PDLIM7-216ENST00000506537 IGHV3-30P01768 117 aa12.32□□□□□ -0.44
PDLIM7-216ENST00000506537 IGHV3-33P01772 117 aa12.32□□□□□ -0.44
PDLIM7-216ENST00000506537 IGHV3-30-3P0DP02 117 aa12.32□□□□□ -0.44
PDLIM7-216ENST00000506537 IGHV3-30-5P0DP03 117 aa12.32□□□□□ -0.44
PDLIM7-216ENST00000506537 TRAV9-2A0A087WT02 112 aa12.31□□□□□ -0.44
PDLIM7-216ENST00000506537 A0A1B0GUT8 65 aa12.3□□□□□ -0.44
PDLIM7-216ENST00000506537 H7C1H1 209 aa12.3□□□□□ -0.44
PDLIM7-216ENST00000506537 C10orf126Q8N4M7 172 aa12.3□□□□□ -0.44
PDLIM7-216ENST00000506537 NUP35Q8NFH5 326 aa12.3□□□□□ -0.44
PDLIM7-216ENST00000506537 TRAV26-2A0A0B4J265 109 aa12.29□□□□□ -0.44
PDLIM7-216ENST00000506537 RASL11AQ6T310 242 aa12.29□□□□□ -0.44
PDLIM7-216ENST00000506537 GATD1Q8NB37 220 aa12.29□□□□□ -0.44
PDLIM7-216ENST00000506537 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
PDLIM7-216ENST00000506537 NIT1Q86X76 327 aa12.28□□□□□ -0.44
PDLIM7-216ENST00000506537 BORCS7Q96B45 105 aa12.28□□□□□ -0.44
PDLIM7-216ENST00000506537 DNAJC30Q96LL9 226 aa12.28□□□□□ -0.44
PDLIM7-216ENST00000506537 HERC2O95714 4834 aa12.28□□□□□ -0.44
PDLIM7-216ENST00000506537 TRBV6-8A0A0A6YYG3 113 aa12.27□□□□□ -0.45
PDLIM7-216ENST00000506537 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.45
PDLIM7-216ENST00000506537 IBA57-AS1B1ANH7 110 aa12.27□□□□□ -0.45
PDLIM7-216ENST00000506537 SMIM15Q7Z3B0 74 aa12.27□□□□□ -0.45
PDLIM7-216ENST00000506537 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-216ENST00000506537 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-216ENST00000506537 NIT2Q9NQR4 276 aa12.26□□□□□ -0.45
PDLIM7-216ENST00000506537 NAT8BQ9UHF3 227 aa12.26□□□□□ -0.45
PDLIM7-216ENST00000506537 DNAH5Q8TE73 4624 aa12.25□□□□□ -0.45
PDLIM7-216ENST00000506537 NFE4Q86UQ8 179 aa12.25□□□□□ -0.45
PDLIM7-216ENST00000506537 RPL39LQ96EH5 51 aaKnown RBP12.25□□□□□ -0.45
PDLIM7-216ENST00000506537 TMEM191AQ9H0A3 160 aa12.25□□□□□ -0.45
PDLIM7-216ENST00000506537 PCLOQ9Y6V0 5065 aa12.24□□□□□ -0.45
PDLIM7-216ENST00000506537 RNF185Q96GF1 192 aa12.24□□□□□ -0.45
PDLIM7-216ENST00000506537 GAS8-AS1O95177 125 aa12.23□□□□□ -0.45
PDLIM7-216ENST00000506537 ADCYAP1P18509 176 aa12.23□□□□□ -0.45
PDLIM7-216ENST00000506537 RIGQ13278 110 aa12.23□□□□□ -0.45
PDLIM7-216ENST00000506537 LAGE3Q14657 143 aa12.23□□□□□ -0.45
PDLIM7-216ENST00000506537 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.23□□□□□ -0.45
PDLIM7-216ENST00000506537 Q9HAA7 133 aa12.23□□□□□ -0.45
PDLIM7-216ENST00000506537 PNRC1Q12796 327 aaPredicted RBP12.22□□□□□ -0.45
PDLIM7-216ENST00000506537 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
PDLIM7-216ENST00000506537 UQCC3Q6UW78 93 aa12.22□□□□□ -0.45
PDLIM7-216ENST00000506537 AMN1Q8IY45 258 aa12.22□□□□□ -0.45
PDLIM7-216ENST00000506537 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
PDLIM7-216ENST00000506537 FRZBQ92765 325 aa12.22□□□□□ -0.45
PDLIM7-216ENST00000506537 LRP1BQ9NZR2 4599 aa12.21□□□□□ -0.45
PDLIM7-216ENST00000506537 IQCJQ1A5X6 159 aa12.21□□□□□ -0.45
PDLIM7-216ENST00000506537 CHCHD7Q9BUK0 85 aa12.21□□□□□ -0.45
PDLIM7-216ENST00000506537 URGCP-MRPS24S4R325 110 aa12.21□□□□□ -0.45
PDLIM7-216ENST00000506537 A0A087WX48 190 aa12.2□□□□□ -0.46
PDLIM7-216ENST00000506537 TMEM218A2RU14 115 aa12.2□□□□□ -0.46
PDLIM7-216ENST00000506537 RAB4AP20338 218 aa12.2□□□□□ -0.46
PDLIM7-216ENST00000506537 MPV17L2Q567V2 206 aa12.2□□□□□ -0.46
PDLIM7-216ENST00000506537 COMMD7Q86VX2 200 aa12.2□□□□□ -0.46
PDLIM7-216ENST00000506537 CHCHD5Q9BSY4 110 aa12.2□□□□□ -0.46
PDLIM7-216ENST00000506537 KIAA1109Q2LD37 5005 aa12.19□□□□□ -0.46
PDLIM7-216ENST00000506537 TRBV25-1A0A075B6N4 114 aa12.19□□□□□ -0.46
PDLIM7-216ENST00000506537 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
PDLIM7-216ENST00000506537 PPP1R2P9O14990 202 aa12.19□□□□□ -0.46
PDLIM7-216ENST00000506537 KLK12Q9UKR0 248 aa12.19□□□□□ -0.46
PDLIM7-216ENST00000506537 A0A1B0GXF2 115 aa12.18□□□□□ -0.46
PDLIM7-216ENST00000506537 TMEM262E9PQX1 116 aa12.18□□□□□ -0.46
PDLIM7-216ENST00000506537 RPS10P46783 165 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-216ENST00000506537 KRTAP10-2P60368 255 aa12.18□□□□□ -0.46
PDLIM7-216ENST00000506537 MRPL54Q6P161 138 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-216ENST00000506537 KCNIP4Q6PIL6 250 aa12.18□□□□□ -0.46
PDLIM7-216ENST00000506537 A0A087WTM6 91 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 TRBV6-5A0A0K0K1A5 114 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 SDHAF1A6NFY7 115 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 SMKR1H3BMG3 65 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 NCR2O95944 276 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 CAMPP49913 170 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 GAGE6Q13070 117 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 ATRAIDQ6UW56 229 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 Q8N976 141 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
PDLIM7-216ENST00000506537 A0A1B0GW15 77 aa12.16□□□□□ -0.46
PDLIM7-216ENST00000506537 F8W036 122 aa12.16□□□□□ -0.46
PDLIM7-216ENST00000506537 COTL1Q14019 142 aa12.16□□□□□ -0.46
PDLIM7-216ENST00000506537 FAM104BQ5XKR9 115 aa12.16□□□□□ -0.46
PDLIM7-216ENST00000506537 ANAPC16Q96DE5 110 aa12.16□□□□□ -0.46
PDLIM7-216ENST00000506537 TRAV8-3A0A0A6YYJ7 113 aa12.15□□□□□ -0.46
PDLIM7-216ENST00000506537 MT-ND4LP03901 98 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms