RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 METTL1Q9UBP6 276 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 MPC1Q9Y5U8 109 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 HLA-DRB4X5D2U9 266 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 DLG5Q8TDM6 1919 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 MYO7AQ13402 2215 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 C2CD3Q4AC94 2353 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 PIEZO2Q9H5I5 2752 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 ITPR3Q14573 2671 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 FN1P02751 2386 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 MICAL3Q7RTP6 2002 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 IGKV2-40A0A087WW87 121 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 LOC110117498A0A087WWA1 95 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 IFITM5A6NNB3 132 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 M0R2N4 97 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 INE1O15225 51 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 NUPR1O60356 82 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 NCR2O95944 276 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 IGKV2D-40P01614 121 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 TSPAN19P0C672 248 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 DNAJB13P59910 316 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 NCS1P62166 190 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 CCSMST1Q4G0I0 132 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 GLYATL3Q5SZD4 288 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 DEFB124Q8NES8 71 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 CFAP46Q8IYW2 2715 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 CREBBPQ92793 2442 aa1.59□□□□□ -2.15
TRAPPC13-208ENST00000505553 MYH13Q9UKX3 1938 aa1.59□□□□□ -2.16
TRAPPC13-208ENST00000505553 TRIOO75962 3097 aa1.59□□□□□ -2.16
TRAPPC13-208ENST00000505553 DSPP15924 2871 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-208ENST00000505553 ITPR1Q14643 2758 aa1.59□□□□□ -2.16
TRAPPC13-208ENST00000505553 IGKV3-7A0A075B6H7 116 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 EFCAB10A6NFE3 127 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 NDUFA2O43678 99 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 YPEL1O60688 119 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 KDELR1P24390 212 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 SNRPD3P62318 126 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 FAM19A2Q8N3H0 131 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 DEFB119Q8N690 84 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 TET1Q8NFU7 2136 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 OR10AC1Q8NH08 325 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 OTOSQ8NHW6 89 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 SMIM7Q9BQ49 75 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 TENM4Q6N022 2769 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 TEX15Q9BXT5 2789 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 ASPMQ8IZT6 3477 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 CCDC171Q6TFL3 1326 aa1.58□□□□□ -2.16
TRAPPC13-208ENST00000505553 IGLV3-32A0A0A0MS00 114 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 SPAARA0A1B0GVQ0 90 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 IGHV3-33P01772 117 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 RBP4P02753 201 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 IGLC6P0CF74 106 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 CTAGE3PQ8IX95 158 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 C10orf111Q8N326 155 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 VPS25Q9BRG1 176 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 SLC35B3Q9H1N7 401 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 TMEM14CQ9P0S9 112 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 COMMD3Q9UBI1 195 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 SPEGQ15772 3267 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 SMG1Q96Q15 3661 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 VPS13AQ96RL7 3174 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 FRYQ5TBA9 3013 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 ZZEF1O43149 2961 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 FBN3Q75N90 2809 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 FANCMQ8IYD8 2048 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 IGHV1-24A0A0C4DH33 117 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 LOC107984156A0A0G2JMH3 177 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 IGKV2-29A2NJV5 120 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 BBIP1A8MTZ0 92 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 K7ERU9 68 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 GEMIN2O14893 280 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 EDF1O60869 148 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 CD14P08571 375 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 CD52P31358 61 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 IZUMO2Q6UXV1 221 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 ZCCHC23Q6ZST2 131 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 ARL17AQ8IVW1 177 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 MRPL57Q9BQC6 102 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 TNFSF18Q9UNG2 199 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 DNAJC15Q9Y5T4 150 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 APC2O95996 2303 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 ACACAQ13085 2346 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 PTPRQQ9UMZ3 2332 aa1.57□□□□□ -2.16
TRAPPC13-208ENST00000505553 ASXL3Q9C0F0 2248 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 DOCK10Q96BY6 2186 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 HEATR5BQ9P2D3 2071 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 MCM3APO60318 1980 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 RTTNQ86VV8 2226 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 ATG2AQ2TAZ0 1938 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 UBR5O95071 2799 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 HIVEP2P31629 2446 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 TRBV6-7A0A0A0MS04 114 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 CCL25O15444 150 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 SULT1C4O75897 302 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 DNAL4O96015 105 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 CD3DP04234 171 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 PLGLB1Q02325 96 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 NEDD8Q15843 81 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 GDF5OSQ5U4N7 250 aa1.56□□□□□ -2.16
TRAPPC13-208ENST00000505553 LINC00299Q6ZSB3 139 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms