RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TRAV12-1A0A0B4J245 112 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1-8A0A0C4DH67 115 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 TEX49A0A1B0GTD5 131 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 IQCF6A8MYZ5 107 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 H3BVH4 76 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 K7EMI3 77 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 GNRH2O43555 120 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 PPP1R17O96001 155 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 MIFP14174 115 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF138P52744 262 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 C2orf82Q6UX34 121 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 PRNTQ86SH4 94 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF525Q8N782 197 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 UBALD1Q8TB05 177 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 ITLN2Q8WWU7 325 aaPredicted RBP1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 NABP2Q9BQ15 211 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 DEFB126Q9BYW3 111 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 CDC42SE1Q9NRR8 79 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 DHRS4-AS1Q9P1J3 65 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM14AQ9Y6G1 99 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 PLXNB2O15031 1838 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 PLXNA3P51805 1871 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 GREB1Q4ZG55 1949 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 COL4A6Q14031 1691 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 PTPRBP23467 1997 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 DOCK6Q96HP0 2047 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 KIAA1549LQ6ZVL6 1849 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM223A0PJW6 202 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM30CPA0ZSE6 113 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 PIN1P1O15428 100 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-48P01763 117 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1-16P04430 117 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV1-2P23083 117 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 NPPCP23582 126 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 FXYD6P3P58550 94 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 RPL38P63173 70 aaKnown RBP1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 SYCNQ0VAF6 134 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 GTF3C1Q12789 2109 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF818PQ6ZRF7 136 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 FAM223AQ8IWN6 122 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 DYNAPQ8N1N2 210 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 C20orf197Q8N268 126 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC00269Q8N2A0 174 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNRF1Q8ND25 227 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC01560Q8TB33 94 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM167BQ9NRX6 74 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 DPM3Q9P2X0 92 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 BRWD3Q6RI45 1802 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 UBR3Q6ZT12 1888 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LRP4O75096 1905 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 EXPH5Q8NEV8 1989 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGLV3-9A0A075B6K5 115 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMSB15BA0A087X1C1 80 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-72A0A0B4J1Y9 119 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 hDV103S1A0JD37 113 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 C11orf86A6NJI1 115 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 FAM223BA6NKX1 122 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LEPROTO15243 131 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 DNAL4O96015 105 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGLV2-8P01709 118 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-33P01772 117 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 BGLAPP02818 100 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 MSMBP08118 114 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-30-3P0DP02 117 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 DYNLT1P63172 113 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 PRR4Q16378 134 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 C9orf116Q5BN46 136 aaPredicted RBP1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 CASC10Q5T4H9 136 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 SOSTDC1Q6X4U4 206 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LYPD6Q86Y78 171 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 ORMDL3Q8N138 153 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 Q8N6K4 173 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 PFN4Q8NHR9 129 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC01006Q8NI28 216 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 SMCR5Q8TEV8 140 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 B9D2Q9BPU9 175 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 WFDC6Q9BQY6 131 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF355PQ9NSJ1 428 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC00474Q9P2X8 69 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 NDUFA12Q9UI09 145 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF706Q9Y5V0 76 aaPredicted RBP1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 U3KQK5 164 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 SCN2AQ99250 2005 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 DOCK4Q8N1I0 1966 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 SSC5DA1L4H1 1573 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRAV23DV6A0A075B6W5 121 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 A0A096LNJ9 63 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-74A0A0B4J1X5 117 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRAV22A0A0B4J277 110 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-35A0A0C4DH35 117 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 A0A0J9YX75 114 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRBV7-4A0A0J9YYF1 115 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRBV6-1A0A0K0K1D8 114 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 LOC101927531A0A1B0GV80 90 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 SDHAF1A6NFY7 115 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF815PA8K554 130 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM14DPA8MWL7 114 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 C16orf90A8MZG2 172 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 HCG22E2RYF7 251 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms