RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TRAV12-1A0A0B4J245 112 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1-8A0A0C4DH67 115 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 TEX49A0A1B0GTD5 131 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 IQCF6A8MYZ5 107 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 H3BVH4 76 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 K7EMI3 77 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 GNRH2O43555 120 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 PPP1R17O96001 155 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 MIFP14174 115 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF138P52744 262 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 C2orf82Q6UX34 121 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 PRNTQ86SH4 94 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF525Q8N782 197 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 UBALD1Q8TB05 177 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 ITLN2Q8WWU7 325 aaPredicted RBP1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 NABP2Q9BQ15 211 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 DEFB126Q9BYW3 111 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 CDC42SE1Q9NRR8 79 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 DHRS4-AS1Q9P1J3 65 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM14AQ9Y6G1 99 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 PLXNB2O15031 1838 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 PLXNA3P51805 1871 aa1.33□□□□□ -2.2
HMGB3P17-201ENST00000504195 GREB1Q4ZG55 1949 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 COL4A6Q14031 1691 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 PTPRBP23467 1997 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 DOCK6Q96HP0 2047 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 KIAA1549LQ6ZVL6 1849 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM223A0PJW6 202 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM30CPA0ZSE6 113 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 PIN1P1O15428 100 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-48P01763 117 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGKV1-16P04430 117 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV1-2P23083 117 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 NPPCP23582 126 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 FXYD6P3P58550 94 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 RPL38P63173 70 aaKnown RBP1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 SYCNQ0VAF6 134 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 GTF3C1Q12789 2109 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF818PQ6ZRF7 136 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 FAM223AQ8IWN6 122 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 DYNAPQ8N1N2 210 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 C20orf197Q8N268 126 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC00269Q8N2A0 174 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNRF1Q8ND25 227 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC01560Q8TB33 94 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM167BQ9NRX6 74 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 DPM3Q9P2X0 92 aa1.32□□□□□ -2.2
HMGB3P17-201ENST00000504195 BRWD3Q6RI45 1802 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 UBR3Q6ZT12 1888 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LRP4O75096 1905 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 EXPH5Q8NEV8 1989 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGLV3-9A0A075B6K5 115 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMSB15BA0A087X1C1 80 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-72A0A0B4J1Y9 119 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 hDV103S1A0JD37 113 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 C11orf86A6NJI1 115 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 FAM223BA6NKX1 122 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LEPROTO15243 131 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 DNAL4O96015 105 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGLV2-8P01709 118 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-33P01772 117 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 BGLAPP02818 100 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 MSMBP08118 114 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-30-3P0DP02 117 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 DYNLT1P63172 113 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 PRR4Q16378 134 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 C9orf116Q5BN46 136 aaPredicted RBP1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 CASC10Q5T4H9 136 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 SOSTDC1Q6X4U4 206 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LYPD6Q86Y78 171 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 ORMDL3Q8N138 153 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 Q8N6K4 173 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 PFN4Q8NHR9 129 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC01006Q8NI28 216 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 SMCR5Q8TEV8 140 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 B9D2Q9BPU9 175 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 WFDC6Q9BQY6 131 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF355PQ9NSJ1 428 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 LINC00474Q9P2X8 69 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 NDUFA12Q9UI09 145 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF706Q9Y5V0 76 aaPredicted RBP1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 U3KQK5 164 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 SCN2AQ99250 2005 aa1.31□□□□□ -2.2
HMGB3P17-201ENST00000504195 DOCK4Q8N1I0 1966 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 SSC5DA1L4H1 1573 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRAV23DV6A0A075B6W5 121 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 A0A096LNJ9 63 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-74A0A0B4J1X5 117 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRAV22A0A0B4J277 110 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 IGHV3-35A0A0C4DH35 117 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 A0A0J9YX75 114 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRBV7-4A0A0J9YYF1 115 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TRBV6-1A0A0K0K1D8 114 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 LOC101927531A0A1B0GV80 90 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 SDHAF1A6NFY7 115 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 ZNF815PA8K554 130 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 TMEM14DPA8MWL7 114 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 C16orf90A8MZG2 172 aa1.3□□□□□ -2.2
HMGB3P17-201ENST00000504195 HCG22E2RYF7 251 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms