RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 MRPL16Q9NX20 251 aaKnown RBP6.5□□□□□ -1.37
NR1I3-216ENST00000502848 MUC4Q99102 2169 aa6.5□□□□□ -1.37
NR1I3-216ENST00000502848 TRAV26-2A0A0B4J265 109 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 TRBV6-4A0A1B0GX49 114 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 F5H697 171 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 SMKR1H3BMG3 65 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 VCYO14598 125 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 POLR2KP53803 58 aaKnown RBP6.49□□□□□ -1.37
NR1I3-216ENST00000502848 Q6ZTI0 123 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 Q8NAQ8 132 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 OR11H2Q8NH07 326 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 KIR2DL4Q99706 377 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 TMEM70Q9BUB7 260 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 NOTCH3Q9UM47 2321 aa6.49□□□□□ -1.37
NR1I3-216ENST00000502848 TRGV2A0A075B6R0 118 aa6.48□□□□□ -1.37
NR1I3-216ENST00000502848 IGHV1-24A0A0C4DH33 117 aa6.48□□□□□ -1.37
NR1I3-216ENST00000502848 NUPR1O60356 82 aa6.48□□□□□ -1.37
NR1I3-216ENST00000502848 HBDP02042 147 aa6.48□□□□□ -1.37
NR1I3-216ENST00000502848 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
NR1I3-216ENST00000502848 IGHV4-28A0A0C4DH34 117 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 K7EQD1 137 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 GATA1P15976 413 aaPredicted RBP6.47□□□□□ -1.37
NR1I3-216ENST00000502848 FCER1GP30273 86 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 LAGE3Q14657 143 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 RHOHQ15669 191 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 PDZD11Q5EBL8 140 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 OR10D4PQ8NGN7 298 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 DKK2Q9UBU2 259 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 DNAH3Q8TD57 4116 aa6.47□□□□□ -1.37
NR1I3-216ENST00000502848 GAS8-AS1O95177 125 aa6.46□□□□□ -1.38
NR1I3-216ENST00000502848 LEPROTL1O95214 131 aa6.46□□□□□ -1.38
NR1I3-216ENST00000502848 PRM2P04554 102 aa6.46□□□□□ -1.38
NR1I3-216ENST00000502848 NPSP0C0P6 89 aa6.46□□□□□ -1.38
NR1I3-216ENST00000502848 SPART-AS1P0CW21 52 aa6.46□□□□□ -1.38
NR1I3-216ENST00000502848 JOSD1Q15040 202 aaPredicted RBP6.46□□□□□ -1.38
NR1I3-216ENST00000502848 SPATA12Q7Z6I5 190 aa6.46□□□□□ -1.38
NR1I3-216ENST00000502848 RPL39LQ96EH5 51 aaKnown RBP6.46□□□□□ -1.38
NR1I3-216ENST00000502848 TNFRSF18Q9Y5U5 241 aa6.46□□□□□ -1.38
NR1I3-216ENST00000502848 A0A096LNJ9 63 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 LOC389332A0A1B0GUA5 103 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 GAGE12BA1L429 117 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 I3L3M4 83 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 GAGE7O76087 117 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 GAGE12FP0CL80 117 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 GAGE12GP0CL81 117 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 GAGE12IP0CL82 117 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 RPL36AP83881 106 aaKnown RBP6.45□□□□□ -1.38
NR1I3-216ENST00000502848 TMEM97Q5BJF2 176 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 FAM222AQ5U5X8 452 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 DAZ4Q86SG3 579 aaKnown RBP6.45□□□□□ -1.38
NR1I3-216ENST00000502848 RPL36ALQ969Q0 106 aaKnown RBP6.45□□□□□ -1.38
NR1I3-216ENST00000502848 ZNF479Q96JC4 524 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 SPATA25Q9BR10 227 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 TM2D3Q9BRN9 247 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 PRADC1Q9BSG0 188 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 DAZ3Q9NR90 486 aaKnown RBP6.45□□□□□ -1.38
NR1I3-216ENST00000502848 CMYA5Q8N3K9 4069 aa6.45□□□□□ -1.38
NR1I3-216ENST00000502848 TRBV7-3A0A075B6L6 115 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 K7EIL1 84 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 ATP5LO75964 103 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 BTF3P20290 206 aaKnown RBP6.44□□□□□ -1.38
NR1I3-216ENST00000502848 PET117Q6UWS5 81 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 FAM19A2Q8N3H0 131 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 NEXN-AS1Q8NBZ9 246 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 TOMM6Q96B49 74 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 MAP1LC3CQ9BXW4 147 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 PRO0255Q9UI72 69 aa6.44□□□□□ -1.38
NR1I3-216ENST00000502848 TRGV4A0A0C4DH28 118 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 C20orf202A1L168 122 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 ATP5G1P05496 136 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 CRYBA4P53673 196 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 DAD1P61803 113 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 SMAGPQ0VAQ4 97 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 FHL2Q14192 279 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 PMCHL1Q16048 86 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 SH2D6Q7Z4S9 175 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 SLC25A29Q8N8R3 303 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 GTSF1LQ9H1H1 148 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 CYSLTR1Q9Y271 337 aa6.43□□□□□ -1.38
NR1I3-216ENST00000502848 TRAV26-1A0A087WT03 109 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 IGHV3-73A0A0B4J1V6 119 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 H3BNG1 76 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 NUDT3O95989 172 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 TSHBP01222 138 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 LINC00694P0DN24 101 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 DEFB130BP0DP73 79 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 DEFB130AP0DP74 79 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 EMP1P54849 157 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 UBE2D3P61077 147 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 UBE2D2P62837 147 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 COTL1Q14019 142 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 PYY3Q5JQD4 70 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 Q6ZSN1 163 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 ERASQ7Z444 233 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 LINC00518Q8N0U6 118 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 TIMM17AQ99595 171 aa6.42□□□□□ -1.38
NR1I3-216ENST00000502848 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.41□□□□□ -1.38
NR1I3-216ENST00000502848 SYS1-DBNDD2H3BUS1 97 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 723.6 ms