RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 SPRR3Q9UBC9 169 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 C15orf65H3BRN8 121 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 RBM12B-AS1Q9P1G2 102 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 IGF1P05019 195 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 LINC00846Q9NV44 126 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 CCL3L1P16619 93 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 USMG5Q96IX5 58 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 SCN11AQ9UI33 1791 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 H0Y9J4 135 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 LINC01560Q8TB33 94 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 LMO7Q8WWI1 1683 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 hDV103S1A0JD37 113 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 ZNF883P0CG24 379 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 CMC4P56277 68 aaPredicted RBP3.61□□□□□ -1.83
NEAT1-202ENST00000501122 CDSNQ15517 529 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 PREX1Q8TCU6 1659 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 IGHV3-38A0A0C4DH36 116 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 C9orf116Q5BN46 136 aaPredicted RBP3.61□□□□□ -1.83
NEAT1-202ENST00000501122 CCL24O00175 119 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 COX7BP24311 80 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 A0A0J9YWU9 116 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 C6orf99Q4VX62 202 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 IFT172Q9UG01 1749 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 ETDCA0A1B0GVM5 59 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 Q6ZS46 218 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 C9orf47Q6ZRZ4 202 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 PPLO60437 1756 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 NDUFA1O15239 70 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.61□□□□□ -1.83
NEAT1-202ENST00000501122 A0A0J9YX75 114 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 LINC00208Q96KT6 92 aa3.61□□□□□ -1.83
NEAT1-202ENST00000501122 POM121L12Q8N7R1 296 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 RUSC1-AS1Q66K80 236 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 PATE2Q6UY27 113 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 NBEAQ8NFP9 2946 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 C5orf67F2Z3F1 127 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 ODF3L1Q8IXM7 274 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 PEAK1Q9H792 1746 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 IGHV4-38-2P0DP08 117 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 ZNF142P52746 1687 aaPredicted RBP3.6□□□□□ -1.83
NEAT1-202ENST00000501122 TRBV6-8A0A0A6YYG3 113 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 UBE2D4Q9Y2X8 147 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 C20orf203Q8NBC4 194 aa3.6□□□□□ -1.83
NEAT1-202ENST00000501122 GRNP28799 593 aaKnown RBP3.6□□□□□ -1.83
NEAT1-202ENST00000501122 TNFRSF13BO14836 293 aaPredicted RBP3.6□□□□□ -1.83
NEAT1-202ENST00000501122 WT1P19544 449 aaPredicted RBP3.6□□□□□ -1.83
NEAT1-202ENST00000501122 RGPD1P0DJD0 1748 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 ABCA12Q86UK0 2595 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 PARP4Q9UKK3 1724 aaKnown RBP3.59□□□□□ -1.83
NEAT1-202ENST00000501122 SPRNQ5BIV9 151 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 LAMA4Q16363 1823 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 IGLV3-32A0A0A0MS00 114 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 TRBV6-5A0A0K0K1A5 114 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 LINC00482Q8N8I6 264 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 SMIM11BQ8TCY0 68 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 NTM-AS1Q6ZSK4 140 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 RHPN1-AS1Q9BWJ2 59 aa3.59□□□□□ -1.83
NEAT1-202ENST00000501122 LYNX1G3V0Z9 82 aa3.59□□□□□ -1.84
NEAT1-202ENST00000501122 LYNX1P0DP58 116 aa3.59□□□□□ -1.84
NEAT1-202ENST00000501122 PHLPP1O60346 1717 aa3.59□□□□□ -1.84
NEAT1-202ENST00000501122 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.84
NEAT1-202ENST00000501122 PRUNE2Q8WUY3 3088 aa3.59□□□□□ -1.84
NEAT1-202ENST00000501122 FHL2Q14192 279 aa3.59□□□□□ -1.84
NEAT1-202ENST00000501122 CTSGP08311 255 aa3.59□□□□□ -1.84
NEAT1-202ENST00000501122 PTPRBP23467 1997 aa3.59□□□□□ -1.84
NEAT1-202ENST00000501122 Q6ZQY7 126 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 RNF185Q96GF1 192 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 A8MUN3 132 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 ANKRD26Q9UPS8 1709 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 MYOM1P52179 1685 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 SRRM5B3KS81 715 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 NWD2Q9ULI1 1742 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 RIMBP3Q9UFD9 1639 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 RFPL3SP0C7P2 107 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 CRYBG1Q9Y4K1 1723 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 K7EMT4 169 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 MED14OSP0DP75 135 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 ADAMTSL4-AS1Q5T5F5 129 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 IGKV1D-17A0A075B6S4 117 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 TTTY12Q9BZ98 90 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 RBBP6Q7Z6E9 1792 aaKnown RBP3.58□□□□□ -1.84
NEAT1-202ENST00000501122 DCANP1Q8TF63 244 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 TLN1Q9Y490 2541 aaKnown RBP3.58□□□□□ -1.84
NEAT1-202ENST00000501122 USP54Q70EL1 1684 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 SEM1Q6ZVN7 128 aa3.58□□□□□ -1.84
NEAT1-202ENST00000501122 IBA57-AS1B1ANH7 110 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 DEFB121Q5J5C9 76 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 PIP4P2Q8N4L2 257 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 MINOS1Q5TGZ0 78 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 IGHV4-30-4P0DP06 118 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 IGHV4-31P0DP07 118 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 LINC01547P58512 204 aaPredicted RBP3.57□□□□□ -1.84
NEAT1-202ENST00000501122 FAM208AQ9UK61 1670 aaKnown RBP3.57□□□□□ -1.84
NEAT1-202ENST00000501122 ANGP03950 147 aaKnown RBP3.57□□□□□ -1.84
NEAT1-202ENST00000501122 PIK3C2AO00443 1686 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 RIMBP3CA6NJZ7 1639 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 RIMBP3BA6NNM3 1639 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 SPINK13Q1W4C9 94 aa3.57□□□□□ -1.84
NEAT1-202ENST00000501122 C11orf53Q8IXP5 236 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms