RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 HIST1H4GQ99525 98 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 EDA2RQ9HAV5 297 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 CBY1Q9Y3M2 126 aa8.14□□□□□ -1.11
CMSS1-208ENST00000496116 A8MWV9 139 aa8.13□□□□□ -1.11
CMSS1-208ENST00000496116 M0R2P5 195 aa8.13□□□□□ -1.11
CMSS1-208ENST00000496116 CD300EQ496F6 205 aaPredicted RBP8.13□□□□□ -1.11
CMSS1-208ENST00000496116 DEFB104AQ8WTQ1 72 aa8.13□□□□□ -1.11
CMSS1-208ENST00000496116 PRADC1Q9BSG0 188 aa8.13□□□□□ -1.11
CMSS1-208ENST00000496116 CST9LQ9H4G1 147 aa8.13□□□□□ -1.11
CMSS1-208ENST00000496116 EPG5Q9HCE0 2579 aa8.13□□□□□ -1.11
CMSS1-208ENST00000496116 IGLV4-69A0A075B6H9 119 aa8.12□□□□□ -1.11
CMSS1-208ENST00000496116 TRAV25A0A0B4J276 109 aa8.12□□□□□ -1.11
CMSS1-208ENST00000496116 A0A1W2PPM0 123 aa8.12□□□□□ -1.11
CMSS1-208ENST00000496116 RBMY1BA6NDE4 496 aaKnown RBP8.12□□□□□ -1.11
CMSS1-208ENST00000496116 RBMY1EA6NEQ0 496 aaKnown RBP8.12□□□□□ -1.11
CMSS1-208ENST00000496116 RBMY1DP0C7P1 496 aaKnown RBP8.12□□□□□ -1.11
CMSS1-208ENST00000496116 RNASE8Q8TDE3 154 aaKnown RBP8.12□□□□□ -1.11
CMSS1-208ENST00000496116 NHP2Q9NX24 153 aaKnown RBP8.12□□□□□ -1.11
CMSS1-208ENST00000496116 APCP25054 2843 aa8.12□□□□□ -1.11
CMSS1-208ENST00000496116 GAGE12BA1L429 117 aa8.12□□□□□ -1.11
CMSS1-208ENST00000496116 K7EP34 96 aa8.12□□□□□ -1.11
CMSS1-208ENST00000496116 FABP2P12104 132 aa8.12□□□□□ -1.11
CMSS1-208ENST00000496116 C11orf86A6NJI1 115 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 INSP01308 110 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 UFSP1Q6NVU6 142 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 PTH2Q96A98 100 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 LINC01587Q99440 93 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 LINC00467Q9BRT7 94 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 ZNF815PA8K554 130 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 SCGB1D4Q6XE38 83 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 C20orf203Q8NBC4 194 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 CLUHP3Q96NS8 147 aa8.11□□□□□ -1.11
CMSS1-208ENST00000496116 NAA38Q9BRA0 125 aaKnown RBP8.11□□□□□ -1.11
CMSS1-208ENST00000496116 ZNF469Q96JG9 3925 aaPredicted RBP8.1□□□□□ -1.11
CMSS1-208ENST00000496116 FHL3Q13643 280 aa8.1□□□□□ -1.11
CMSS1-208ENST00000496116 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
CMSS1-208ENST00000496116 SPCS1Q9Y6A9 102 aa8.1□□□□□ -1.11
CMSS1-208ENST00000496116 TRBV7-3A0A075B6L6 115 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 CCL24O00175 119 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 P0DMU3 169 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 FAM231AP0DMU4 169 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 FAM231CP0DMU5 169 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 EMP1P54849 157 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 TMEM170BQ5T4T1 132 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 SPXQ9BT56 116 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 ESM1Q9NQ30 184 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 TNFRSF18Q9Y5U5 241 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 IGHV3-73A0A0B4J1V6 119 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 K7ERJ3 54 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 RHODO00212 210 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 RBX1P62877 108 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 STHQ8IWL8 128 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 PHLDA1Q8WV24 401 aaPredicted RBP8.09□□□□□ -1.11
CMSS1-208ENST00000496116 ITPR3Q14573 2671 aa8.09□□□□□ -1.11
CMSS1-208ENST00000496116 NBPF19A0A087WUL8 3843 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 A0A1W2PRX2 142 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 HIST2H2BDQ6DRA6 164 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 CFAP161Q6P656 301 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 C11orf44Q8N8P7 122 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 TSSC4Q9Y5U2 329 aaPredicted RBP8.08□□□□□ -1.12
CMSS1-208ENST00000496116 TLN2Q9Y4G6 2542 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 CD28P10747 220 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 C12orf74Q32Q52 190 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 NFE4Q86UQ8 179 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 C11orf72Q8NBR9 251 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 ZNRF2Q8NHG8 242 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 VCX2Q9H322 139 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 YAE1D1Q9NRH1 226 aa8.08□□□□□ -1.12
CMSS1-208ENST00000496116 PRM2P04554 102 aa8.07□□□□□ -1.12
CMSS1-208ENST00000496116 SRSF9Q13242 221 aaKnown RBP eCLIP8.07□□□□□ -1.12
CMSS1-208ENST00000496116 ODF3L2Q3SX64 289 aa8.07□□□□□ -1.12
CMSS1-208ENST00000496116 OCIAD2Q56VL3 154 aa8.07□□□□□ -1.12
CMSS1-208ENST00000496116 HIST2H2BCQ6DN03 193 aa8.07□□□□□ -1.12
CMSS1-208ENST00000496116 PYGO1Q9Y3Y4 419 aa8.07□□□□□ -1.12
CMSS1-208ENST00000496116 RNASE1P07998 156 aaKnown RBP8.06□□□□□ -1.12
CMSS1-208ENST00000496116 PROK1P58294 105 aa8.06□□□□□ -1.12
CMSS1-208ENST00000496116 C16orf95Q9H693 158 aa8.06□□□□□ -1.12
CMSS1-208ENST00000496116 IGLV4-3A0A075B6K6 122 aa8.06□□□□□ -1.12
CMSS1-208ENST00000496116 IGLL5B9A064 214 aa8.06□□□□□ -1.12
CMSS1-208ENST00000496116 CRYBA4P53673 196 aa8.06□□□□□ -1.12
CMSS1-208ENST00000496116 BEAN1Q3B7T3 259 aa8.06□□□□□ -1.12
CMSS1-208ENST00000496116 DNAJC30Q96LL9 226 aa8.06□□□□□ -1.12
CMSS1-208ENST00000496116 OPRPNQ99935 248 aaPredicted RBP8.06□□□□□ -1.12
CMSS1-208ENST00000496116 CITED2Q99967 270 aaPredicted RBP8.06□□□□□ -1.12
CMSS1-208ENST00000496116 A0A1B0GWB2 263 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 J3QKU1 62 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 LGALS3P17931 250 aaKnown RBP8.05□□□□□ -1.12
CMSS1-208ENST00000496116 CMC4P56277 68 aaPredicted RBP8.05□□□□□ -1.12
CMSS1-208ENST00000496116 KRTAP1-1Q07627 177 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 LINC01006Q8NI28 216 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 PLEKHB2Q96CS7 222 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 ZNF479Q96JC4 524 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 XCL2Q9UBD3 114 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 SONP18583 2426 aaKnown RBP8.05□□□□□ -1.12
CMSS1-208ENST00000496116 K7ERU9 68 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 IGHV3-53P01767 116 aa8.05□□□□□ -1.12
CMSS1-208ENST00000496116 PLA2G2AP14555 144 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms