RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 SMIM15Q7Z3B0 74 aa13.27□□□□□ -0.29
HDAC4-212ENST00000495497 KRTAP1-5Q9BYS1 174 aa13.27□□□□□ -0.29
HDAC4-212ENST00000495497 IGHV3-38A0A0C4DH36 116 aa13.26□□□□□ -0.29
HDAC4-212ENST00000495497 OR10J3Q5JRS4 329 aa13.26□□□□□ -0.29
HDAC4-212ENST00000495497 LELP1Q5T871 98 aa13.26□□□□□ -0.29
HDAC4-212ENST00000495497 RIGQ13278 110 aa13.25□□□□□ -0.29
HDAC4-212ENST00000495497 PPP1R2P9O14990 202 aa13.24□□□□□ -0.29
HDAC4-212ENST00000495497 RASL11AQ6T310 242 aa13.24□□□□□ -0.29
HDAC4-212ENST00000495497 GATD1Q8NB37 220 aa13.24□□□□□ -0.29
HDAC4-212ENST00000495497 SEC11CQ9BY50 192 aa13.24□□□□□ -0.29
HDAC4-212ENST00000495497 TRAV8-6A0A0B4J262 113 aa13.23□□□□□ -0.29
HDAC4-212ENST00000495497 H7C1H1 209 aa13.23□□□□□ -0.29
HDAC4-212ENST00000495497 MT-ND4LP03901 98 aa13.23□□□□□ -0.29
HDAC4-212ENST00000495497 ANAPC16Q96DE5 110 aa13.23□□□□□ -0.29
HDAC4-212ENST00000495497 TMEM191AQ9H0A3 160 aa13.23□□□□□ -0.29
HDAC4-212ENST00000495497 TNFRSF18Q9Y5U5 241 aa13.23□□□□□ -0.29
HDAC4-212ENST00000495497 FAT2Q9NYQ8 4349 aa13.22□□□□□ -0.29
HDAC4-212ENST00000495497 MRPL54Q6P161 138 aaKnown RBP13.22□□□□□ -0.29
HDAC4-212ENST00000495497 RNF185Q96GF1 192 aa13.22□□□□□ -0.29
HDAC4-212ENST00000495497 GAS8-AS1O95177 125 aa13.21□□□□□ -0.29
HDAC4-212ENST00000495497 CAMPP49913 170 aa13.21□□□□□ -0.29
HDAC4-212ENST00000495497 AMN1Q8IY45 258 aa13.21□□□□□ -0.29
HDAC4-212ENST00000495497 RPL39LQ96EH5 51 aaKnown RBP13.21□□□□□ -0.29
HDAC4-212ENST00000495497 DNAJC30Q96LL9 226 aa13.21□□□□□ -0.29
HDAC4-212ENST00000495497 NIT2Q9NQR4 276 aa13.21□□□□□ -0.29
HDAC4-212ENST00000495497 RTL8CO15255 209 aa13.2□□□□□ -0.3
HDAC4-212ENST00000495497 DNAH10OSP0CZ25 163 aa13.2□□□□□ -0.3
HDAC4-212ENST00000495497 RAB4AP20338 218 aa13.2□□□□□ -0.3
HDAC4-212ENST00000495497 TTC32Q5I0X7 151 aa13.2□□□□□ -0.3
HDAC4-212ENST00000495497 C10orf91Q5T1B1 145 aa13.2□□□□□ -0.3
HDAC4-212ENST00000495497 C1orf134Q5TEV5 83 aa13.2□□□□□ -0.3
HDAC4-212ENST00000495497 Q8N3U1 123 aa13.2□□□□□ -0.3
HDAC4-212ENST00000495497 DEFB104AQ8WTQ1 72 aa13.2□□□□□ -0.3
HDAC4-212ENST00000495497 A0A087WWC5 75 aa13.19□□□□□ -0.3
HDAC4-212ENST00000495497 IGHV3-30P01768 117 aa13.19□□□□□ -0.3
HDAC4-212ENST00000495497 IGHV3-33P01772 117 aa13.19□□□□□ -0.3
HDAC4-212ENST00000495497 IGHV3-30-3P0DP02 117 aa13.19□□□□□ -0.3
HDAC4-212ENST00000495497 IGHV3-30-5P0DP03 117 aa13.19□□□□□ -0.3
HDAC4-212ENST00000495497 EPPK1P58107 5090 aaKnown RBP13.18□□□□□ -0.3
HDAC4-212ENST00000495497 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
HDAC4-212ENST00000495497 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
HDAC4-212ENST00000495497 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
HDAC4-212ENST00000495497 A0A1B0GXF2 115 aa13.17□□□□□ -0.3
HDAC4-212ENST00000495497 SMKR1H3BMG3 65 aa13.17□□□□□ -0.3
HDAC4-212ENST00000495497 NTM-AS1Q6ZSK4 140 aa13.17□□□□□ -0.3
HDAC4-212ENST00000495497 TRBV6-8A0A0A6YYG3 113 aa13.16□□□□□ -0.3
HDAC4-212ENST00000495497 HBBP68871 147 aa13.16□□□□□ -0.3
HDAC4-212ENST00000495497 LINC01556Q5JQF7 62 aa13.16□□□□□ -0.3
HDAC4-212ENST00000495497 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-212ENST00000495497 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
HDAC4-212ENST00000495497 TRAV9-2A0A087WT02 112 aa13.15□□□□□ -0.3
HDAC4-212ENST00000495497 A0A1B0GW15 77 aa13.15□□□□□ -0.3
HDAC4-212ENST00000495497 NCR2O95944 276 aa13.15□□□□□ -0.3
HDAC4-212ENST00000495497 FAM104BQ5XKR9 115 aa13.15□□□□□ -0.3
HDAC4-212ENST00000495497 RPS10P46783 165 aaKnown RBP13.14□□□□□ -0.31
HDAC4-212ENST00000495497 MRPL51Q4U2R6 128 aaKnown RBP13.14□□□□□ -0.31
HDAC4-212ENST00000495497 FRZBQ92765 325 aa13.14□□□□□ -0.31
HDAC4-212ENST00000495497 NIT1Q86X76 327 aa13.13□□□□□ -0.31
HDAC4-212ENST00000495497 CLRN3Q8NCR9 226 aa13.13□□□□□ -0.31
HDAC4-212ENST00000495497 MRAP2Q96G30 205 aa13.13□□□□□ -0.31
HDAC4-212ENST00000495497 CTDSP1Q9GZU7 261 aa13.13□□□□□ -0.31
HDAC4-212ENST00000495497 C7orf77A4D0Y5 90 aa13.12□□□□□ -0.31
HDAC4-212ENST00000495497 S100A8P05109 93 aa13.12□□□□□ -0.31
HDAC4-212ENST00000495497 ATP5L2Q7Z4Y8 100 aa13.12□□□□□ -0.31
HDAC4-212ENST00000495497 SDHAF1A6NFY7 115 aa13.11□□□□□ -0.31
HDAC4-212ENST00000495497 PRSS29PA6NIE9 313 aa13.11□□□□□ -0.31
HDAC4-212ENST00000495497 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
HDAC4-212ENST00000495497 APOC3P02656 99 aa13.11□□□□□ -0.31
HDAC4-212ENST00000495497 TMEM97Q5BJF2 176 aa13.11□□□□□ -0.31
HDAC4-212ENST00000495497 CHCHD5Q9BSY4 110 aa13.11□□□□□ -0.31
HDAC4-212ENST00000495497 DNAH11Q96DT5 4516 aa13.11□□□□□ -0.31
HDAC4-212ENST00000495497 TRBV25-1A0A075B6N4 114 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 TRBV6-5A0A0K0K1A5 114 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 LINC00336Q6ZUF6 198 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 SLC7A5P1Q8MH63 180 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 C10orf126Q8N4M7 172 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 BTF3L4Q96K17 158 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 IMMP2LQ96T52 175 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 ST20Q9HBF5 79 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 RPS10P5Q9NQ39 176 aa13.1□□□□□ -0.31
HDAC4-212ENST00000495497 IGHV1-24A0A0C4DH33 117 aa13.09□□□□□ -0.31
HDAC4-212ENST00000495497 K7EP13 123 aa13.09□□□□□ -0.31
HDAC4-212ENST00000495497 GAGE6Q13070 117 aa13.09□□□□□ -0.31
HDAC4-212ENST00000495497 KCNIP4Q6PIL6 250 aa13.09□□□□□ -0.31
HDAC4-212ENST00000495497 NRACQ8N912 160 aa13.09□□□□□ -0.31
HDAC4-212ENST00000495497 HECTD4Q9Y4D8 3996 aa13.09□□□□□ -0.31
HDAC4-212ENST00000495497 URGCP-MRPS24S4R325 110 aa13.09□□□□□ -0.31
HDAC4-212ENST00000495497 A0A087WX48 190 aa13.08□□□□□ -0.32
HDAC4-212ENST00000495497 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
HDAC4-212ENST00000495497 CKS2P33552 79 aa13.08□□□□□ -0.32
HDAC4-212ENST00000495497 TNP2Q05952 138 aa13.08□□□□□ -0.32
HDAC4-212ENST00000495497 COTL1Q14019 142 aa13.08□□□□□ -0.32
HDAC4-212ENST00000495497 IQCJQ1A5X6 159 aa13.08□□□□□ -0.32
HDAC4-212ENST00000495497 Q9HAA7 133 aa13.08□□□□□ -0.32
HDAC4-212ENST00000495497 D6R8Y8 96 aa13.07□□□□□ -0.32
HDAC4-212ENST00000495497 PMCHP20382 165 aa13.07□□□□□ -0.32
HDAC4-212ENST00000495497 RHEBQ15382 184 aa13.07□□□□□ -0.32
HDAC4-212ENST00000495497 MPV17L2Q567V2 206 aa13.07□□□□□ -0.32
HDAC4-212ENST00000495497 Q6ZRN7 208 aaPredicted RBP13.07□□□□□ -0.32
HDAC4-212ENST00000495497 TMEM70Q9BUB7 260 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms