RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ADIRFQ15847 76 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 CT83Q5H943 113 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 GTSF1Q8WW33 167 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 OSTCQ9NRP0 149 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 SUMO4Q6EEV6 95 aa10.79□□□□□ -0.68
LIME1-209ENST00000494776 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
LIME1-209ENST00000494776 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
LIME1-209ENST00000494776 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
LIME1-209ENST00000494776 RPL23P62829 140 aaKnown RBP10.78□□□□□ -0.68
LIME1-209ENST00000494776 KCNIP4Q6PIL6 250 aa10.78□□□□□ -0.68
LIME1-209ENST00000494776 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
LIME1-209ENST00000494776 ISOC2Q96AB3 205 aa10.78□□□□□ -0.68
LIME1-209ENST00000494776 M0QY20 66 aa10.77□□□□□ -0.69
LIME1-209ENST00000494776 DNAJC30Q96LL9 226 aa10.77□□□□□ -0.69
LIME1-209ENST00000494776 HIGD1CA8MV81 97 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 IBA57-AS1B1ANH7 110 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 RASL11AQ6T310 242 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
LIME1-209ENST00000494776 DAZ4Q86SG3 579 aaKnown RBP10.76□□□□□ -0.69
LIME1-209ENST00000494776 GFRA4Q9GZZ7 299 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 Q9HAA7 133 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 DAZ3Q9NR90 486 aaKnown RBP10.76□□□□□ -0.69
LIME1-209ENST00000494776 A0A087WX48 190 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 TRBV6-8A0A0A6YYG3 113 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 TMEM262E9PQX1 116 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 EREGO14944 169 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 PSCAO43653 123 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 FOXA3P55318 350 aaPredicted RBP10.75□□□□□ -0.69
LIME1-209ENST00000494776 TMEM97Q5BJF2 176 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 V9GYV3 84 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 A0A1B0GUT8 65 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 FAM231BA6NCW3 169 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 NIT1Q86X76 327 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 Q8N3U1 123 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 NIT2Q9NQR4 276 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 DNAH17Q9UFH2 4485 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 FAT2Q9NYQ8 4349 aa10.73□□□□□ -0.69
LIME1-209ENST00000494776 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
LIME1-209ENST00000494776 HERC2O95714 4834 aa10.73□□□□□ -0.69
LIME1-209ENST00000494776 TRAV26-2A0A0B4J265 109 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 LAGE3Q14657 143 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 CLLU1Q5K131 121 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 SPATA12Q7Z6I5 190 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 NAT8BQ9UHF3 227 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 TRAV8-3A0A0A6YYJ7 113 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 C16orf90A8MZG2 172 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 PKIAP61925 76 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 RIGQ13278 110 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 ELOBQ15370 118 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 GATD1Q8NB37 220 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 CHCHD7Q9BUK0 85 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 NUP35Q8NFH5 326 aa10.7□□□□□ -0.7
LIME1-209ENST00000494776 FRZBQ92765 325 aa10.7□□□□□ -0.7
LIME1-209ENST00000494776 TM2D2Q9BX73 214 aa10.7□□□□□ -0.7
LIME1-209ENST00000494776 KLK12Q9UKR0 248 aa10.7□□□□□ -0.7
LIME1-209ENST00000494776 IGHV1-24A0A0C4DH33 117 aa10.69□□□□□ -0.7
LIME1-209ENST00000494776 NTM-AS1Q6ZSK4 140 aa10.69□□□□□ -0.7
LIME1-209ENST00000494776 A0A087WTM6 91 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 IFITM2Q01629 132 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 GAGE6Q13070 117 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 RMI2Q96E14 147 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 TMEM191AQ9H0A3 160 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 COTL1Q14019 142 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 IQCJQ1A5X6 159 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 DEFB104AQ8WTQ1 72 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
LIME1-209ENST00000494776 CRPP02741 224 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 ANGP03950 147 aaKnown RBP10.66□□□□□ -0.7
LIME1-209ENST00000494776 KRTAP10-2P60368 255 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 Q0VG73 95 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 MPV17L2Q567V2 206 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 COX11Q9Y6N1 276 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 PKHD1P08F94 4074 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 PKD1P98161 4303 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 UBE2L6O14933 153 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 PPP1R2P9O14990 202 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 PNRC1Q12796 327 aaPredicted RBP10.65□□□□□ -0.7
LIME1-209ENST00000494776 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 IGKV2D-24A0A075B6R9 120 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 RAB4AP20338 218 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 AMTP48728 403 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 CAMPP49913 170 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 Q8N976 141 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 MRAP2Q96G30 205 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 A0A1B0GW15 77 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 SDHAF1A6NFY7 115 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 RBX1P62877 108 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 UQCC3Q6UW78 93 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 RNF185Q96GF1 192 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 ST20Q9HBF5 79 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 MT-ND4LP03901 98 aa10.62□□□□□ -0.71
LIME1-209ENST00000494776 S100A8P05109 93 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms