RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 J3QR89 54 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 CORTO00230 105 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 CCL16O15467 120 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 ATG12O94817 140 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 IGF2P01344 180 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 MT-ND4LP03901 98 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 APODP05090 189 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 MPC1LP0DKB6 136 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 HIST1H1DP16402 221 aaKnown RBP0.89□□□□□ -2.27
NCL-210ENST00000494618 CKS1BP61024 79 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 GNG11P61952 73 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 RRAS2P62070 204 aaPredicted RBP0.89□□□□□ -2.27
NCL-210ENST00000494618 LCN6P62502 163 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 RPS28P62857 69 aaKnown RBP0.89□□□□□ -2.27
NCL-210ENST00000494618 GNG3P63215 75 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 HMGN3Q15651 99 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 DEFB113Q30KQ7 82 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 TMEM128Q5BJH2 165 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 TMEM78Q5T7P6 136 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 C4orf33Q8N1A6 199 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 OR10K1Q8NGX5 313 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 OR13C6PQ8NH95 151 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 STAG3L4Q8TBR4 150 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 OBSCN-AS1Q96MR7 158 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 S100A13Q99584 98 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 GINS3Q9BRX5 216 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 PSMG3Q9BT73 122 aaPredicted RBP0.89□□□□□ -2.27
NCL-210ENST00000494618 SEC11CQ9BY50 192 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 PBOV1Q9GZY1 135 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 TAF9BQ9HBM6 251 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 ORMDL1Q9P0S3 153 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 TMEM14CQ9P0S9 112 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 TRAPPC2LQ9UL33 140 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.89□□□□□ -2.272e-10■■■□□ 18.1
NCL-210ENST00000494618 ARFGEF1Q9Y6D6 1849 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 A0A0G2JMZ2 1700 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 LRRC37AA6NMS7 1700 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 NRAPQ86VF7 1730 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 NWD2Q9ULI1 1742 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 TRPM2O94759 1503 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 ABCC6O95255 1503 aa0.89□□□□□ -2.27
NCL-210ENST00000494618 NCOA6Q14686 2063 aaPredicted RBP0.88□□□□□ -2.27
NCL-210ENST00000494618 TNRC6AQ8NDV7 1962 aaKnown RBP0.88□□□□□ -2.27
NCL-210ENST00000494618 PLXNA2O75051 1894 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 DLEC1Q9Y238 1755 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 ADGRB1O14514 1584 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 ARHGEF5Q12774 1597 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 HEATR1Q9H583 2144 aaKnown RBP0.88□□□□□ -2.27
NCL-210ENST00000494618 E7EUB6 86 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 CDC42EP2O14613 210 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 PDCD5O14737 125 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 DEGS1O15121 323 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 MFSD11O43934 449 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 NUPR1O60356 82 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 NCR2O95944 276 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 CD2P06729 351 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 CYBAP13498 195 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 EVI2AP22794 236 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 GNG4P50150 75 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 DSCR4P56555 118 aaPredicted RBP0.88□□□□□ -2.27
NCL-210ENST00000494618 TAS2R41P59536 307 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 NCS1P62166 190 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 PSG9Q00887 426 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 IQCJQ1A5X6 159 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 Q5BKY6 102 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 PYY3Q5JQD4 70 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 POP5Q969H6 163 aaKnown RBP0.88□□□□□ -2.27
NCL-210ENST00000494618 ARL11Q969Q4 196 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 LINC00052Q96N35 136 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 SNHG12Q9BXW3 62 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 NPCDR1Q9BY65 106 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 LINC00470Q9BZP3 86 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 SH3BGRL3Q9H299 93 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 BANF2Q9H503 90 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 RERGLQ9H628 205 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 SMCO4Q9NRQ5 59 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 LAMTOR3Q9UHA4 124 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 ERG28Q9UKR5 140 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 UFC1Q9Y3C8 167 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 AGLP35573 1532 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 CSPG4Q6UVK1 2322 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 SNRNP200O75643 2136 aaKnown RBP0.88□□□□□ -2.27
NCL-210ENST00000494618 SCN7AQ01118 1682 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 SCN3AQ9NY46 2000 aa0.88□□□□□ -2.27
NCL-210ENST00000494618 SSC5DA1L4H1 1573 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 ANKRD36A6QL64 1941 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 GREB1Q4ZG55 1949 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 ALPK2Q86TB3 2170 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 LY75O60449 1722 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 DDX60LQ5H9U9 1706 aaKnown RBP0.87□□□□□ -2.27
NCL-210ENST00000494618 TOGARAM1Q9Y4F4 1720 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 CACNA1EQ15878 2313 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 PLIN4Q96Q06 1357 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 DOCK4Q8N1I0 1966 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 ASXL3Q9C0F0 2248 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 TRIOO75962 3097 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 TRAV36DV7A0A075B6V5 113 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 TRBV6-4A0A1B0GX49 114 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 A0A1W2PRE2 83 aa0.87□□□□□ -2.27
NCL-210ENST00000494618 MAP1LC3B2A6NCE7 125 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms