RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 IGHV3-53P01767 116 aa6.32□□□□□ -1.4
TM4SF1-203ENST00000493298 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
TM4SF1-203ENST00000493298 APCSP02743 223 aa6.32□□□□□ -1.4
TM4SF1-203ENST00000493298 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
TM4SF1-203ENST00000493298 IQCJQ1A5X6 159 aa6.32□□□□□ -1.4
TM4SF1-203ENST00000493298 VSIG2Q96IQ7 327 aa6.32□□□□□ -1.4
TM4SF1-203ENST00000493298 DPH3P1Q9H4G8 78 aa6.32□□□□□ -1.4
TM4SF1-203ENST00000493298 TRAV4A0A0B4J268 109 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 IFITM10A6NMD0 228 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 LYRM9A8MSI8 78 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 D6R8Y8 96 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 DEFB130BP0DP73 79 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 DEFB130AP0DP74 79 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 RAB4BP61018 213 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 Q6ZTC4 211 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 C11orf45Q8TAV5 145 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 C18orf32Q8TCD1 76 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 NDUFAF3Q9BU61 184 aa6.31□□□□□ -1.4
TM4SF1-203ENST00000493298 DYNC1H1Q14204 4646 aaKnown RBP6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 A8MWV9 139 aa6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 MT-ND6P03923 174 aa6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 SRIP30626 198 aa6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 POLR2KP53803 58 aaKnown RBP6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 LGALS9CQ6DKI2 356 aa6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 ZFP2Q6ZN57 461 aa6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 SLC25A29Q8N8R3 303 aa6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 SYT8Q8NBV8 401 aa6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 AP1S3Q96PC3 154 aa6.3□□□□□ -1.4
TM4SF1-203ENST00000493298 A0A096LNJ9 63 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 TRBV6-5A0A0K0K1A5 114 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 TNFRSF6BO95407 300 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 Q0VG73 95 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 COX19Q49B96 90 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 COA6Q5JTJ3 125 aaKnown RBP6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 FAM74A4Q5TZK3 123 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 NEGR1Q7Z3B1 354 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 NEXN-AS1Q8NBZ9 246 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 OR4C5Q8NGB2 326 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
TM4SF1-203ENST00000493298 MGPP08493 103 aa6.28□□□□□ -1.4
TM4SF1-203ENST00000493298 SPART-AS1P0CW21 52 aa6.28□□□□□ -1.4
TM4SF1-203ENST00000493298 CRYBA4P53673 196 aa6.28□□□□□ -1.4
TM4SF1-203ENST00000493298 DEFB104AQ8WTQ1 72 aa6.28□□□□□ -1.4
TM4SF1-203ENST00000493298 FAM104AQ969W3 186 aa6.28□□□□□ -1.4
TM4SF1-203ENST00000493298 BORCS7Q96B45 105 aa6.28□□□□□ -1.4
TM4SF1-203ENST00000493298 PRELID3AQ96N28 172 aa6.28□□□□□ -1.4
TM4SF1-203ENST00000493298 HERC2O95714 4834 aa6.28□□□□□ -1.4
TM4SF1-203ENST00000493298 LY6G6CO95867 125 aa6.27□□□□□ -1.41
TM4SF1-203ENST00000493298 S100A8P05109 93 aa6.27□□□□□ -1.41
TM4SF1-203ENST00000493298 ORMDL3Q8N138 153 aa6.27□□□□□ -1.41
TM4SF1-203ENST00000493298 MRAP2Q96G30 205 aa6.27□□□□□ -1.41
TM4SF1-203ENST00000493298 KLK5Q9Y337 293 aaPredicted RBP6.27□□□□□ -1.41
TM4SF1-203ENST00000493298 TRGV2A0A075B6R0 118 aa6.26□□□□□ -1.41
TM4SF1-203ENST00000493298 C5orf52A6NGY3 159 aa6.26□□□□□ -1.41
TM4SF1-203ENST00000493298 CKS2P33552 79 aa6.26□□□□□ -1.41
TM4SF1-203ENST00000493298 IFI27P40305 119 aaPredicted RBP6.26□□□□□ -1.41
TM4SF1-203ENST00000493298 NTM-AS1Q6ZSK4 140 aa6.26□□□□□ -1.41
TM4SF1-203ENST00000493298 NIT1Q86X76 327 aa6.26□□□□□ -1.41
TM4SF1-203ENST00000493298 TMEM70Q9BUB7 260 aa6.26□□□□□ -1.41
TM4SF1-203ENST00000493298 TRBV6-4A0A1B0GX49 114 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 C1orf196B1AJZ1 125 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 F5H697 171 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 SERF1AO75920 110 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 TSHBP01222 138 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 PPBPP02775 128 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 ESDP10768 282 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 TCTAP57738 103 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 UBE2D3P61077 147 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 DAD1P61803 113 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 UBE2D2P62837 147 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 RPL32P62910 135 aaKnown RBP6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 ZNF56Q15929 161 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 NIT2Q9NQR4 276 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 HHLA3Q9XRX5 114 aa6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 TMA7Q9Y2S6 64 aaKnown RBP6.25□□□□□ -1.41
TM4SF1-203ENST00000493298 TRAV10A0A0B4J240 114 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 TRBV27A0A0K0K1C4 114 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 IGLL5B9A064 214 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 K7EQD1 137 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 RHODO00212 210 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 NDUFA6P56556 154 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 SUMO2P61956 95 aaKnown RBP6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 OR10J3Q5JRS4 329 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 C20orf78Q9BR46 151 aa6.24□□□□□ -1.41
TM4SF1-203ENST00000493298 TRAV26-1A0A087WT03 109 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 DEFB131BA0A096LNP1 70 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 IGHV3-38A0A0C4DH36 116 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 A0A0J9YY99 117 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 SDHAF1A6NFY7 115 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 TCAPO15273 167 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 ATP5G1P05496 136 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 SNRPEP62304 92 aaKnown RBP6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 GAGE1Q13065 139 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 GAGE4Q13068 117 aa6.23□□□□□ -1.41
TM4SF1-203ENST00000493298 GAGE5Q13069 117 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms