RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.54■□□□□ 0.08
PSPC1-204ENST00000492741 HIST1H2BHQ93079 126 aa15.54■□□□□ 0.08
PSPC1-204ENST00000492741 HIST1H2BNQ99877 126 aa15.54■□□□□ 0.08
PSPC1-204ENST00000492741 HIST1H2BMQ99879 126 aa15.54■□□□□ 0.08
PSPC1-204ENST00000492741 PRADC1Q9BSG0 188 aa15.54■□□□□ 0.08
PSPC1-204ENST00000492741 TNFRSF18Q9Y5U5 241 aa15.54■□□□□ 0.08
PSPC1-204ENST00000492741 LOC389332A0A1B0GUA5 103 aa15.53■□□□□ 0.08
PSPC1-204ENST00000492741 EDA2RQ9HAV5 297 aa15.53■□□□□ 0.08
PSPC1-204ENST00000492741 ST20Q9HBF5 79 aa15.53■□□□□ 0.08
PSPC1-204ENST00000492741 TMA7Q9Y2S6 64 aaKnown RBP15.53■□□□□ 0.08
PSPC1-204ENST00000492741 HUWE1Q7Z6Z7 4374 aaKnown RBP15.52■□□□□ 0.08
PSPC1-204ENST00000492741 RHOHQ15669 191 aa15.52■□□□□ 0.08
PSPC1-204ENST00000492741 MAP1LC3AQ9H492 121 aa15.52■□□□□ 0.08
PSPC1-204ENST00000492741 PAX4O43316 350 aa15.51■□□□□ 0.07
PSPC1-204ENST00000492741 CRYBA4P53673 196 aa15.51■□□□□ 0.07
PSPC1-204ENST00000492741 IQCJQ1A5X6 159 aa15.51■□□□□ 0.07
PSPC1-204ENST00000492741 C18orf32Q8TCD1 76 aa15.51■□□□□ 0.07
PSPC1-204ENST00000492741 TRBV10-1A0A0K0K1A3 114 aa15.51■□□□□ 0.07
PSPC1-204ENST00000492741 SUMO2P61956 95 aaKnown RBP15.51■□□□□ 0.07
PSPC1-204ENST00000492741 NEXN-AS1Q8NBZ9 246 aa15.51■□□□□ 0.07
PSPC1-204ENST00000492741 Q9UF83 564 aa15.51■□□□□ 0.07
PSPC1-204ENST00000492741 A0A0J9YY99 117 aa15.5■□□□□ 0.07
PSPC1-204ENST00000492741 RPL36AP83881 106 aaKnown RBP15.5■□□□□ 0.07
PSPC1-204ENST00000492741 BAGE3Q86Y29 109 aa15.5■□□□□ 0.07
PSPC1-204ENST00000492741 RPL36ALQ969Q0 106 aaKnown RBP15.5■□□□□ 0.07
PSPC1-204ENST00000492741 C20orf78Q9BR46 151 aa15.5■□□□□ 0.07
PSPC1-204ENST00000492741 DEFB131BA0A096LNP1 70 aa15.49■□□□□ 0.07
PSPC1-204ENST00000492741 ZNRF2Q8NHG8 242 aa15.49■□□□□ 0.07
PSPC1-204ENST00000492741 PRSS3P2Q8NHM4 247 aa15.49■□□□□ 0.07
PSPC1-204ENST00000492741 DNAJC30Q96LL9 226 aa15.49■□□□□ 0.07
PSPC1-204ENST00000492741 DNAH9Q9NYC9 4486 aa15.49■□□□□ 0.07
PSPC1-204ENST00000492741 COL7A1Q02388 2944 aa15.49■□□□□ 0.07
PSPC1-204ENST00000492741 TRAV26-1A0A087WT03 109 aa15.48■□□□□ 0.07
PSPC1-204ENST00000492741 LOC100131303A0A0U1RQF7 123 aa15.48■□□□□ 0.07
PSPC1-204ENST00000492741 GAGE12JA6NER3 117 aa15.48■□□□□ 0.07
PSPC1-204ENST00000492741 GAGE1Q13065 139 aa15.48■□□□□ 0.07
PSPC1-204ENST00000492741 GAGE4Q13068 117 aa15.48■□□□□ 0.07
PSPC1-204ENST00000492741 GAGE5Q13069 117 aa15.48■□□□□ 0.07
PSPC1-204ENST00000492741 GAGE13Q4V321 117 aa15.48■□□□□ 0.07
PSPC1-204ENST00000492741 SDHAF1A6NFY7 115 aa15.48■□□□□ 0.07
PSPC1-204ENST00000492741 TRBV7-3A0A075B6L6 115 aa15.47■□□□□ 0.07
PSPC1-204ENST00000492741 TRAV10A0A0B4J240 114 aa15.47■□□□□ 0.07
PSPC1-204ENST00000492741 TRBV6-5A0A0K0K1A5 114 aa15.47■□□□□ 0.07
PSPC1-204ENST00000492741 GYPEP15421 78 aa15.47■□□□□ 0.07
PSPC1-204ENST00000492741 NDUFA6P56556 154 aa15.47■□□□□ 0.07
PSPC1-204ENST00000492741 Q0VG73 95 aa15.47■□□□□ 0.07
PSPC1-204ENST00000492741 PRKDCP78527 4128 aaKnown RBP15.47■□□□□ 0.07
PSPC1-204ENST00000492741 IFI27P40305 119 aaPredicted RBP15.46■□□□□ 0.07
PSPC1-204ENST00000492741 S100A6P06703 90 aa15.46■□□□□ 0.06
PSPC1-204ENST00000492741 TMEM70Q9BUB7 260 aa15.46■□□□□ 0.06
PSPC1-204ENST00000492741 PMCHP20382 165 aa15.45■□□□□ 0.06
PSPC1-204ENST00000492741 FA2HQ7L5A8 372 aa15.45■□□□□ 0.06
PSPC1-204ENST00000492741 VSIG2Q96IQ7 327 aa15.45■□□□□ 0.06
PSPC1-204ENST00000492741 SMIM2Q9BVW6 85 aa15.45■□□□□ 0.06
PSPC1-204ENST00000492741 NXT2Q9NPJ8 142 aaKnown RBP15.45■□□□□ 0.06
PSPC1-204ENST00000492741 PRSS47A8MTI9 375 aa15.44■□□□□ 0.06
PSPC1-204ENST00000492741 VCYO14598 125 aa15.44■□□□□ 0.06
PSPC1-204ENST00000492741 NEGR1Q7Z3B1 354 aa15.44■□□□□ 0.06
PSPC1-204ENST00000492741 NIT1Q86X76 327 aa15.44■□□□□ 0.06
PSPC1-204ENST00000492741 POLR2KP53803 58 aaKnown RBP15.43■□□□□ 0.06
PSPC1-204ENST00000492741 RNASEKQ6P5S7 137 aaKnown RBP15.43■□□□□ 0.06
PSPC1-204ENST00000492741 PHLDA1Q8WV24 401 aaPredicted RBP15.43■□□□□ 0.06
PSPC1-204ENST00000492741 LINC00614P0C842 121 aa15.43■□□□□ 0.06
PSPC1-204ENST00000492741 Q8N8P6 123 aa15.43■□□□□ 0.06
PSPC1-204ENST00000492741 DEFB104AQ8WTQ1 72 aa15.43■□□□□ 0.06
PSPC1-204ENST00000492741 KIR2DL4Q99706 377 aa15.43■□□□□ 0.06
PSPC1-204ENST00000492741 IGHV3-38A0A0C4DH36 116 aa15.42■□□□□ 0.06
PSPC1-204ENST00000492741 I3L3M4 83 aa15.41■□□□□ 0.06
PSPC1-204ENST00000492741 RPL32P62910 135 aaKnown RBP15.41■□□□□ 0.06
PSPC1-204ENST00000492741 TRBV27A0A0K0K1C4 114 aa15.4■□□□□ 0.06
PSPC1-204ENST00000492741 UBE2D3P61077 147 aa15.4■□□□□ 0.06
PSPC1-204ENST00000492741 UBE2D2P62837 147 aa15.4■□□□□ 0.06
PSPC1-204ENST00000492741 ICOSQ9Y6W8 199 aa15.4■□□□□ 0.06
PSPC1-204ENST00000492741 TCAPO15273 167 aa15.4■□□□□ 0.06
PSPC1-204ENST00000492741 SERF1AO75920 110 aa15.4■□□□□ 0.06
PSPC1-204ENST00000492741 MRPL23Q16540 153 aaKnown RBP15.4■□□□□ 0.06
PSPC1-204ENST00000492741 DAZ4Q86SG3 579 aaKnown RBP15.4■□□□□ 0.06
PSPC1-204ENST00000492741 DAZ3Q9NR90 486 aaKnown RBP15.4■□□□□ 0.06
PSPC1-204ENST00000492741 IGLV2-18A0A075B6J9 118 aa15.39■□□□□ 0.05
PSPC1-204ENST00000492741 A0A096LPF7 62 aa15.39■□□□□ 0.05
PSPC1-204ENST00000492741 FCER1GP30273 86 aa15.39■□□□□ 0.05
PSPC1-204ENST00000492741 AP5S1Q9NUS5 200 aa15.39■□□□□ 0.05
PSPC1-204ENST00000492741 ATP6V0E2Q8NHE4 81 aa15.38■□□□□ 0.05
PSPC1-204ENST00000492741 H3BNG1 76 aa15.37■□□□□ 0.05
PSPC1-204ENST00000492741 NUDT3O95989 172 aa15.37■□□□□ 0.05
PSPC1-204ENST00000492741 CHCHD1Q96BP2 118 aaKnown RBP15.37■□□□□ 0.05
PSPC1-204ENST00000492741 URB1-AS1Q96HZ7 61 aa15.37■□□□□ 0.05
PSPC1-204ENST00000492741 HSBP1O75506 76 aa15.37■□□□□ 0.05
PSPC1-204ENST00000492741 COTL1Q14019 142 aa15.37■□□□□ 0.05
PSPC1-204ENST00000492741 FBN3Q75N90 2809 aa15.36■□□□□ 0.05
PSPC1-204ENST00000492741 IGLL5B9A064 214 aa15.35■□□□□ 0.05
PSPC1-204ENST00000492741 NUPR1O60356 82 aa15.35■□□□□ 0.05
PSPC1-204ENST00000492741 LINC00694P0DN24 101 aa15.35■□□□□ 0.05
PSPC1-204ENST00000492741 LAGE3Q14657 143 aa15.35■□□□□ 0.05
PSPC1-204ENST00000492741 COA6Q5JTJ3 125 aaKnown RBP15.35■□□□□ 0.05
PSPC1-204ENST00000492741 SNRPEP62304 92 aaKnown RBP15.34■□□□□ 0.05
PSPC1-204ENST00000492741 SH2D6Q7Z4S9 175 aa15.34■□□□□ 0.05
PSPC1-204ENST00000492741 K7EMI3 77 aa15.34■□□□□ 0.05
PSPC1-204ENST00000492741 TSHBP01222 138 aa15.34■□□□□ 0.05
PSPC1-204ENST00000492741 LINC00310P59036 64 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms