RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 FAM19A4Q96LR4 140 aa14.49□□□□□ -0.09
SNAPC3-206ENST00000490969 PTPN13Q12923 2485 aa14.48□□□□□ -0.09
SNAPC3-206ENST00000490969 TRAV2A0A0B4J234 112 aa14.48□□□□□ -0.09
SNAPC3-206ENST00000490969 USP9YO00507 2555 aaPredicted RBP14.47□□□□□ -0.09
SNAPC3-206ENST00000490969 SOCS3O14543 225 aa14.47□□□□□ -0.09
SNAPC3-206ENST00000490969 ELANEP08246 267 aa14.47□□□□□ -0.09
SNAPC3-206ENST00000490969 JPT2Q9H910 190 aa14.47□□□□□ -0.09
SNAPC3-206ENST00000490969 ATXN8Q156A1 80 aa14.47□□□□□ -0.09
SNAPC3-206ENST00000490969 LINC01620Q4KN68 170 aa14.47□□□□□ -0.09
SNAPC3-206ENST00000490969 APRG1Q8IVJ8 170 aa14.47□□□□□ -0.09
SNAPC3-206ENST00000490969 MUSTN1Q8IVN3 82 aa14.47□□□□□ -0.09
SNAPC3-206ENST00000490969 SDHAF1A6NFY7 115 aa14.46□□□□□ -0.09
SNAPC3-206ENST00000490969 F6UB75 175 aa14.46□□□□□ -0.09
SNAPC3-206ENST00000490969 LEPROTO15243 131 aa14.46□□□□□ -0.09
SNAPC3-206ENST00000490969 IGHV4-39P01824 125 aa14.46□□□□□ -0.09
SNAPC3-206ENST00000490969 TTC32Q5I0X7 151 aa14.46□□□□□ -0.09
SNAPC3-206ENST00000490969 BPESC1Q9GZL8 116 aa14.46□□□□□ -0.09
SNAPC3-206ENST00000490969 ABCA12Q86UK0 2595 aa14.46□□□□□ -0.09
SNAPC3-206ENST00000490969 GAGE12JA6NER3 117 aa14.46□□□□□ -0.1
SNAPC3-206ENST00000490969 GAGE7O76087 117 aa14.46□□□□□ -0.1
SNAPC3-206ENST00000490969 GAGE12FP0CL80 117 aa14.46□□□□□ -0.1
SNAPC3-206ENST00000490969 GAGE12GP0CL81 117 aa14.46□□□□□ -0.1
SNAPC3-206ENST00000490969 GAGE12IP0CL82 117 aa14.46□□□□□ -0.1
SNAPC3-206ENST00000490969 IFITM1P13164 125 aa14.46□□□□□ -0.1
SNAPC3-206ENST00000490969 GAGE4Q13068 117 aa14.46□□□□□ -0.1
SNAPC3-206ENST00000490969 Q1RN00 199 aa14.46□□□□□ -0.1
SNAPC3-206ENST00000490969 TMEM223A0PJW6 202 aa14.45□□□□□ -0.1
SNAPC3-206ENST00000490969 A0A087WWL8 130 aa14.45□□□□□ -0.1
SNAPC3-206ENST00000490969 F5H697 171 aa14.45□□□□□ -0.1
SNAPC3-206ENST00000490969 SIRPDQ9H106 197 aa14.45□□□□□ -0.1
SNAPC3-206ENST00000490969 TEX49A0A1B0GTD5 131 aa14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 CCDC179H3BU77 68 aa14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 Q6Q795 121 aa14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 UNQ9165/PRO28630Q6UXU0 137 aa14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 NBPF19A0A087WUL8 3843 aa14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 TRBV27A0A0K0K1C4 114 aa14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 RPL13AP40429 203 aaKnown RBP14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 LINC01600Q96MT4 127 aa14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 ODF3Q96PU9 254 aa14.44□□□□□ -0.1
SNAPC3-206ENST00000490969 TENM4Q6N022 2769 aa14.43□□□□□ -0.1
SNAPC3-206ENST00000490969 TRAV8-4A0A0B4J246 113 aa14.43□□□□□ -0.1
SNAPC3-206ENST00000490969 OPRPNQ99935 248 aaPredicted RBP14.43□□□□□ -0.1
SNAPC3-206ENST00000490969 IGHV3-64A0A075B6Q5 118 aa14.42□□□□□ -0.1
SNAPC3-206ENST00000490969 KMT2BQ9UMN6 2715 aaPredicted RBP14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 TRBV7-9A0A0J9YWB2 115 aa14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 TRBV10-2A0A0K0K1G8 114 aa14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 RPL11P62913 178 aaKnown RBP14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 BEX4Q9NWD9 120 aaPredicted RBP14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 ZNF256Q9Y2P7 627 aaPredicted RBP14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 IGHV1-69P01742 117 aa14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 SAA4P35542 130 aa14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 UBE2E1P51965 193 aa14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 LMO4P61968 165 aa14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 C15orf53Q8NAA6 179 aa14.41□□□□□ -0.1
SNAPC3-206ENST00000490969 TRBV6-5A0A0K0K1A5 114 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 ZNF22P17026 224 aaPredicted RBP14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 TRBV30A0A0K0K1B3 111 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 FAM223BA6NKX1 122 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 H3BMM0 161 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 M0R2P5 195 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 TRBV12-3P01733 135 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 FAM159AQ6UWV7 190 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 FAM223AQ8IWN6 122 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 C5orf56Q8N8D9 126 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 UBE2WQ96B02 151 aa14.4□□□□□ -0.1
SNAPC3-206ENST00000490969 ANKRD17O75179 2603 aaKnown RBP14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 ZANQ9Y493 2812 aa14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 LGALS9O00182 355 aa14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 TRIAP1O43715 76 aa14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 CCL19Q99731 98 aa14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 LINC00527Q9UJ94 153 aa14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 DOPEY2Q9Y3R5 2298 aa14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 IGKV3-7A0A075B6H7 116 aa14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 TRAV41A0A0B4J266 112 aa14.39□□□□□ -0.11
SNAPC3-206ENST00000490969 A0A0J9YX75 114 aa14.38□□□□□ -0.11
SNAPC3-206ENST00000490969 NSUN5P1Q3KNT7 163 aa14.38□□□□□ -0.11
SNAPC3-206ENST00000490969 FAM74A4Q5TZK3 123 aa14.38□□□□□ -0.11
SNAPC3-206ENST00000490969 NDUFA4O00483 81 aa14.38□□□□□ -0.11
SNAPC3-206ENST00000490969 A0A0J9YXY3 114 aa14.37□□□□□ -0.11
SNAPC3-206ENST00000490969 KLLNB2CW77 178 aa14.37□□□□□ -0.11
SNAPC3-206ENST00000490969 RHOHQ15669 191 aa14.37□□□□□ -0.11
SNAPC3-206ENST00000490969 ZNF580Q9UK33 172 aa14.37□□□□□ -0.11
SNAPC3-206ENST00000490969 A0A0J9YXV3 536 aa14.36□□□□□ -0.11
SNAPC3-206ENST00000490969 C2orf82Q6UX34 121 aa14.36□□□□□ -0.11
SNAPC3-206ENST00000490969 IGHV4-61A0A0C4DH41 118 aa14.35□□□□□ -0.11
SNAPC3-206ENST00000490969 C19orf54Q5BKX5 351 aa14.35□□□□□ -0.11
SNAPC3-206ENST00000490969 TMEM219Q86XT9 240 aa14.35□□□□□ -0.11
SNAPC3-206ENST00000490969 MDFICQ9P1T7 246 aa14.35□□□□□ -0.11
SNAPC3-206ENST00000490969 M0QY20 66 aa14.34□□□□□ -0.11
SNAPC3-206ENST00000490969 ZNF56Q15929 161 aa14.34□□□□□ -0.11
SNAPC3-206ENST00000490969 H7C423 109 aa14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 ATP5J2P56134 94 aa14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 KRTAP10-9P60411 292 aa14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 C20orf203Q8NBC4 194 aa14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 FAM110AQ9BQ89 295 aa14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 HELZ2Q9BYK8 2649 aaKnown RBP14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 IGHV4-30-2A0A087WSY4 118 aa14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 ADARB2-AS1A8MUL3 147 aa14.33□□□□□ -0.12
SNAPC3-206ENST00000490969 LITAFQ99732 161 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms