RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 PPDPFQ9H3Y8 114 aa8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 DAZ2Q13117 558 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 DAZ4Q86SG3 579 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 C11orf68Q9H3H3 251 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 DAZ3Q9NR90 486 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 MDFICQ9P1T7 246 aa8.56□□□□□ -1.04
CRNKL1-204ENST00000490910 SMIM9A6NGZ8 99 aa8.55□□□□□ -1.04
CRNKL1-204ENST00000490910 LST1O00453 97 aa8.55□□□□□ -1.04
CRNKL1-204ENST00000490910 IGF1P05019 195 aa8.55□□□□□ -1.04
CRNKL1-204ENST00000490910 COX7CP15954 63 aa8.55□□□□□ -1.04
CRNKL1-204ENST00000490910 ITLN2Q8WWU7 325 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-204ENST00000490910 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-204ENST00000490910 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-204ENST00000490910 COX7A2LO14548 114 aa8.55□□□□□ -1.04
CRNKL1-204ENST00000490910 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
CRNKL1-204ENST00000490910 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
CRNKL1-204ENST00000490910 Q8N9W7 124 aa8.54□□□□□ -1.04
CRNKL1-204ENST00000490910 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
CRNKL1-204ENST00000490910 MSRB2Q9Y3D2 182 aa8.54□□□□□ -1.04
CRNKL1-204ENST00000490910 SORL1Q92673 2214 aa8.53□□□□□ -1.04
CRNKL1-204ENST00000490910 A0A1W2PNU3 283 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-204ENST00000490910 ATP5J2P56134 94 aa8.53□□□□□ -1.04
CRNKL1-204ENST00000490910 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
CRNKL1-204ENST00000490910 LAMTOR3Q9UHA4 124 aa8.53□□□□□ -1.04
CRNKL1-204ENST00000490910 IGHV3-16A0A0C4DH30 117 aa8.52□□□□□ -1.04
CRNKL1-204ENST00000490910 LINC01548A6NM66 108 aa8.52□□□□□ -1.04
CRNKL1-204ENST00000490910 IGFL2Q6UWQ7 119 aa8.52□□□□□ -1.04
CRNKL1-204ENST00000490910 SDIM1Q6ZPB5 146 aa8.52□□□□□ -1.04
CRNKL1-204ENST00000490910 ZFAND2AQ8N6M9 145 aa8.52□□□□□ -1.04
CRNKL1-204ENST00000490910 IGIPA6NJ69 53 aa8.52□□□□□ -1.05
CRNKL1-204ENST00000490910 IGLV4-69A0A075B6H9 119 aa8.52□□□□□ -1.05
CRNKL1-204ENST00000490910 BRD3OSQ6XYD6 125 aa8.52□□□□□ -1.05
CRNKL1-204ENST00000490910 ODF3Q96PU9 254 aa8.52□□□□□ -1.05
CRNKL1-204ENST00000490910 ZFAND3Q9H8U3 227 aa8.52□□□□□ -1.05
CRNKL1-204ENST00000490910 POLR2KP53803 58 aaKnown RBP8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 TMEM258P61165 79 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 IGHV4OR15-8A0A075B7B6 117 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 A0A087WW49 117 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 H3BUX3 64 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 FHL3Q13643 280 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 SBSPONQ8IVN8 264 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 TMEM61Q8N0U2 210 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 PSMG3-AS1Q96PY0 264 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 CSDC2Q9Y534 153 aaKnown RBP8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 PFN2P35080 140 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 NSUN5P1Q3KNT7 163 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 Q9HAA7 133 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 CEMP1Q6PRD7 247 aaPredicted RBP8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 C22orf34Q6ZV56 151 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 NRGNQ92686 78 aa8.51□□□□□ -1.05
CRNKL1-204ENST00000490910 TRGV2A0A075B6R0 118 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 H0YGX0 51 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 COX6B1P14854 86 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 MALP21145 153 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 HAMPP81172 84 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 RBM3P98179 157 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 PRR9Q5T870 116 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 CCDC140Q96MF4 163 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 TRGV1A0A0A0MS02 117 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 IGFL3Q6UXB1 125 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 VSIG2Q96IQ7 327 aa8.5□□□□□ -1.05
CRNKL1-204ENST00000490910 LOC107984640A0A0U1RRK4 108 aa8.49□□□□□ -1.05
CRNKL1-204ENST00000490910 PIMREGQ9BSJ6 248 aa8.49□□□□□ -1.05
CRNKL1-204ENST00000490910 IGHV3-53P01767 116 aa8.49□□□□□ -1.05
CRNKL1-204ENST00000490910 C14orf132Q9NPU4 83 aa8.49□□□□□ -1.05
CRNKL1-204ENST00000490910 ORMDL1Q9P0S3 153 aa8.49□□□□□ -1.05
CRNKL1-204ENST00000490910 A0A0J9YX75 114 aa8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 LY6LH3BQJ8 138 aa8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 SERP2Q8N6R1 65 aa8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 SND1-IT1Q9HBX3 110 aa8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 RNASE3P12724 160 aaKnown RBP8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 CXCL5P42830 114 aa8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 DEFB131AP59861 70 aa8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 C20orf173Q96LM9 149 aa8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 KLK5Q9Y337 293 aaPredicted RBP8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 MRGPRG-AS1Q2M3A8 158 aa8.48□□□□□ -1.05
CRNKL1-204ENST00000490910 TRBV6-5A0A0K0K1A5 114 aa8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 GHRHP01286 108 aa8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 IGHG2P01859 326 aa8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 NHLRC4P0CG21 123 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 UNQ9165/PRO28630Q6UXU0 137 aa8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 TRBV7-7A0A0K0K1E9 115 aa8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 F5H768 121 aa8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 PRRC2AP48634 2157 aaKnown RBP8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 LECT2O14960 151 aa8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 CITED2Q99967 270 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-204ENST00000490910 WNK1Q9H4A3 2382 aa8.46□□□□□ -1.05
CRNKL1-204ENST00000490910 CRYGDP07320 174 aa8.46□□□□□ -1.05
CRNKL1-204ENST00000490910 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.05
CRNKL1-204ENST00000490910 M0QY20 66 aa8.46□□□□□ -1.06
CRNKL1-204ENST00000490910 NXPH4O95158 308 aa8.46□□□□□ -1.06
CRNKL1-204ENST00000490910 HIST2H2BCQ6DN03 193 aa8.46□□□□□ -1.06
CRNKL1-204ENST00000490910 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.06
CRNKL1-204ENST00000490910 CDKN2A-AS1Q9UH64 79 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms