RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 SYS1-DBNDD2H3BUS1 97 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 H7C1H1 209 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 IGHV4-30-4P0DP06 118 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 TEX43Q6ZNM6 134 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 Q6ZSN1 163 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 NBEAL2Q6ZNJ1 2754 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 SMIM9A6NGZ8 99 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 IGHV3-53P01767 116 aa6.76□□□□□ -1.33
SF3B1-211ENST00000487698 TRAV4A0A0B4J268 109 aa6.75□□□□□ -1.33
SF3B1-211ENST00000487698 ORMDL2Q53FV1 153 aa6.75□□□□□ -1.33
SF3B1-211ENST00000487698 NEGR1Q7Z3B1 354 aa6.75□□□□□ -1.33
SF3B1-211ENST00000487698 MAP1LC3CQ9BXW4 147 aa6.75□□□□□ -1.33
SF3B1-211ENST00000487698 VCYO14598 125 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 P0DMU3 169 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 FAM231AP0DMU4 169 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 FAM231CP0DMU5 169 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 DEFB135Q30KP9 77 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 PET117Q6UWS5 81 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 OR4C5Q8NGB2 326 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 ZNF479Q96JC4 524 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 NOTCH1P46531 2555 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 A8MZ25 164 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 LINC00612Q8N6U2 182 aa6.74□□□□□ -1.33
SF3B1-211ENST00000487698 S100A12P80511 92 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 SAMD5Q5TGI4 173 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 LINC01545Q5VT33 79 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 NEXN-AS1Q8NBZ9 246 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 IFI27L1Q96BM0 104 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 ZMAT5Q9UDW3 170 aaKnown RBP6.73□□□□□ -1.33
SF3B1-211ENST00000487698 Q9UF83 564 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 NBEAL1Q6ZS30 2694 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 GAGE12BA1L429 117 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 G3V4G9 280 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 GAGE7O76087 117 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 NUDT3O95989 172 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 GAGE12FP0CL80 117 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 GAGE12GP0CL81 117 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 GAGE12IP0CL82 117 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 ZNF664Q8N3J9 261 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 TOMM6Q96B49 74 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 KIR2DL4Q99706 377 aa6.73□□□□□ -1.33
SF3B1-211ENST00000487698 CIDEAO60543 219 aa6.72□□□□□ -1.33
SF3B1-211ENST00000487698 TSHBP01222 138 aa6.72□□□□□ -1.33
SF3B1-211ENST00000487698 RIPPLY3P57055 190 aa6.72□□□□□ -1.33
SF3B1-211ENST00000487698 RNF183Q96D59 192 aa6.72□□□□□ -1.33
SF3B1-211ENST00000487698 DNAJC30Q96LL9 226 aa6.72□□□□□ -1.33
SF3B1-211ENST00000487698 C18orf15Q96N68 181 aa6.72□□□□□ -1.33
SF3B1-211ENST00000487698 TRGV2A0A075B6R0 118 aa6.71□□□□□ -1.33
SF3B1-211ENST00000487698 C20orf202A1L168 122 aa6.71□□□□□ -1.33
SF3B1-211ENST00000487698 I3L3M4 83 aa6.71□□□□□ -1.33
SF3B1-211ENST00000487698 RHOHQ15669 191 aa6.71□□□□□ -1.33
SF3B1-211ENST00000487698 C2orf66Q6UXQ4 117 aa6.71□□□□□ -1.33
SF3B1-211ENST00000487698 OR11H2Q8NH07 326 aa6.71□□□□□ -1.33
SF3B1-211ENST00000487698 TNFRSF18Q9Y5U5 241 aa6.71□□□□□ -1.33
SF3B1-211ENST00000487698 K7EQD1 137 aa6.71□□□□□ -1.34
SF3B1-211ENST00000487698 ATP5LO75964 103 aa6.71□□□□□ -1.34
SF3B1-211ENST00000487698 EMP1P54849 157 aa6.71□□□□□ -1.34
SF3B1-211ENST00000487698 LGALS9CQ6DKI2 356 aa6.71□□□□□ -1.34
SF3B1-211ENST00000487698 Q8NAQ8 132 aa6.71□□□□□ -1.34
SF3B1-211ENST00000487698 MDFIQ99750 246 aa6.71□□□□□ -1.34
SF3B1-211ENST00000487698 VAMP8Q9BV40 100 aa6.71□□□□□ -1.34
SF3B1-211ENST00000487698 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 TRBV10-1A0A0K0K1A3 114 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 LINC01549A6NIU2 74 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 PCP4L1A6NKN8 68 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 H0Y8G0 127 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 MIFP14174 115 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 PKIAP61925 76 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 ATOH7Q8N100 152 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 SLC25A29Q8N8R3 303 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 LYRM9A8MSI8 78 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 G0S2P27469 103 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 DEFB104AQ8WTQ1 72 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 CYSLTR1Q9Y271 337 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 MGAM2Q2M2H8 2515 aa6.7□□□□□ -1.34
SF3B1-211ENST00000487698 TRBV6-4A0A1B0GX49 114 aa6.69□□□□□ -1.34
SF3B1-211ENST00000487698 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-211ENST00000487698 FHL2Q14192 279 aa6.69□□□□□ -1.34
SF3B1-211ENST00000487698 ERASQ7Z444 233 aa6.69□□□□□ -1.34
SF3B1-211ENST00000487698 PMCHL2Q9BQD1 86 aa6.69□□□□□ -1.34
SF3B1-211ENST00000487698 PRO1933Q9H354 126 aa6.69□□□□□ -1.34
SF3B1-211ENST00000487698 ZMAT4Q9H898 229 aa6.69□□□□□ -1.34
SF3B1-211ENST00000487698 TP53TG1Q9Y2A0 90 aa6.69□□□□□ -1.34
SF3B1-211ENST00000487698 PAM16Q9Y3D7 125 aa6.69□□□□□ -1.34
SF3B1-211ENST00000487698 TRBV7-3A0A075B6L6 115 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 TRAV9-2A0A087WT02 112 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 IGIPA6NJ69 53 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 TSTD3H0UI37 97 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 RPL39P62891 51 aaKnown RBP6.68□□□□□ -1.34
SF3B1-211ENST00000487698 ODF1Q14990 250 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 MAJINQ3KP22 176 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 FAM222AQ5U5X8 452 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 C20orf203Q8NBC4 194 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 SCGB3A1Q96QR1 104 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 DKK2Q9UBU2 259 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 DEFB130BP0DP73 79 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 DEFB130AP0DP74 79 aa6.68□□□□□ -1.34
SF3B1-211ENST00000487698 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 PRSS1P07477 247 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms