RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
HMGN1-215ENST00000485550 RMI2Q96E14 147 aa6.94□□□□□ -1.3
HMGN1-215ENST00000485550 COX11Q9Y6N1 276 aa6.94□□□□□ -1.3
HMGN1-215ENST00000485550 TRBV7-3A0A075B6L6 115 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 OXTP01178 125 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 C1QBP02746 253 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 ZNF56Q15929 161 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 PRR27Q6MZM9 219 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 Q8N976 141 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 NEXN-AS1Q8NBZ9 246 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 MBD3L1Q8WWY6 194 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 TCEAL7Q9BRU2 100 aa6.93□□□□□ -1.3
HMGN1-215ENST00000485550 ZNF471Q9BX82 626 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-215ENST00000485550 F5H697 171 aa6.92□□□□□ -1.3
HMGN1-215ENST00000485550 PFDN1O60925 122 aa6.92□□□□□ -1.3
HMGN1-215ENST00000485550 SEC11BP0C7V7 166 aa6.92□□□□□ -1.3
HMGN1-215ENST00000485550 ELOBQ15370 118 aa6.92□□□□□ -1.3
HMGN1-215ENST00000485550 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
HMGN1-215ENST00000485550 Q6ZSA8 131 aa6.92□□□□□ -1.3
HMGN1-215ENST00000485550 MLST8Q9BVC4 326 aa6.92□□□□□ -1.3
HMGN1-215ENST00000485550 TRBV6-8A0A0A6YYG3 113 aa6.91□□□□□ -1.3
HMGN1-215ENST00000485550 UMAD1C9J7I0 102 aa6.91□□□□□ -1.3
HMGN1-215ENST00000485550 S100A9P06702 114 aaKnown RBP6.91□□□□□ -1.3
HMGN1-215ENST00000485550 RAB4BP61018 213 aa6.91□□□□□ -1.3
HMGN1-215ENST00000485550 ENHOQ6UWT2 76 aa6.91□□□□□ -1.3
HMGN1-215ENST00000485550 TMUB2Q71RG4 321 aa6.91□□□□□ -1.3
HMGN1-215ENST00000485550 SCXQ7RTU7 201 aa6.91□□□□□ -1.3
HMGN1-215ENST00000485550 C15orf54Q8N8G6 183 aa6.91□□□□□ -1.3
HMGN1-215ENST00000485550 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
HMGN1-215ENST00000485550 KANTRA0A1W2PQU2 76 aa6.9□□□□□ -1.3
HMGN1-215ENST00000485550 ANGP03950 147 aaKnown RBP6.9□□□□□ -1.3
HMGN1-215ENST00000485550 KRTAP10-4P60372 401 aaPredicted RBP6.9□□□□□ -1.3
HMGN1-215ENST00000485550 CCL20P78556 96 aa6.9□□□□□ -1.3
HMGN1-215ENST00000485550 ZNF345Q14585 488 aa6.9□□□□□ -1.3
HMGN1-215ENST00000485550 MPV17L2Q567V2 206 aa6.9□□□□□ -1.3
HMGN1-215ENST00000485550 CHCHD5Q9BSY4 110 aa6.9□□□□□ -1.3
HMGN1-215ENST00000485550 CHCHD7Q9BUK0 85 aa6.9□□□□□ -1.3
HMGN1-215ENST00000485550 C1orf43Q9BWL3 253 aa6.9□□□□□ -1.3
HMGN1-215ENST00000485550 A0A0D9SG52 128 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 HMSDA8MTL9 139 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 BCL2L11O43521 198 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 SNAI2O43623 268 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 CRPP02741 224 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 GZMBP10144 247 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 RPL35P42766 123 aaKnown RBP6.89□□□□□ -1.31
HMGN1-215ENST00000485550 Q0VG73 95 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 DERL1Q9BUN8 251 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
HMGN1-215ENST00000485550 CXCL1P09341 107 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 SMIM17P0DL12 118 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 GAGE6Q13070 117 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 ATRAIDQ6UW56 229 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 CLPSL2Q6UWE3 100 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.88□□□□□ -1.31
HMGN1-215ENST00000485550 CIRBP-AS1Q8TBR5 109 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 CHAC1Q9BUX1 264 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 GNG13Q9P2W3 67 aa6.88□□□□□ -1.31
HMGN1-215ENST00000485550 HLA-DQA1P01909 254 aa6.87□□□□□ -1.31
HMGN1-215ENST00000485550 MGPP08493 103 aa6.87□□□□□ -1.31
HMGN1-215ENST00000485550 OR5AL1P0C617 328 aa6.87□□□□□ -1.31
HMGN1-215ENST00000485550 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
HMGN1-215ENST00000485550 PKHD1L1Q86WI1 4243 aa6.87□□□□□ -1.31
HMGN1-215ENST00000485550 RAB19A4D1S5 217 aa6.86□□□□□ -1.31
HMGN1-215ENST00000485550 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
HMGN1-215ENST00000485550 EIF5AP63241 154 aaKnown RBP6.86□□□□□ -1.31
HMGN1-215ENST00000485550 CENPWQ5EE01 88 aa6.86□□□□□ -1.31
HMGN1-215ENST00000485550 OR2D3Q8NGH3 330 aa6.86□□□□□ -1.31
HMGN1-215ENST00000485550 DAZAP1Q96EP5 407 aaKnown RBP6.86□□□□□ -1.31
HMGN1-215ENST00000485550 LRP2P98164 4655 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 H3BS24 57 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 IGLV2-8P01709 118 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 RBX1P62877 108 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 C14orf177Q52M58 125 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 AP1S3Q96PC3 154 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 KRTAP4-2Q9BYR5 136 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 MANBALQ9NQG1 85 aa6.85□□□□□ -1.31
HMGN1-215ENST00000485550 TRBV25-1A0A075B6N4 114 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 PRSS1P07477 247 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 IGLC6P0CF74 106 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 MIAQ16674 131 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 TMEM97Q5BJF2 176 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 SUMO4Q6EEV6 95 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 FER1L6-AS1Q8NA97 138 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 C11orf52Q96A22 123 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 VAX2Q9UIW0 290 aa6.84□□□□□ -1.31
HMGN1-215ENST00000485550 IGLV10-54A0A075B6I4 117 aa6.83□□□□□ -1.32
HMGN1-215ENST00000485550 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
HMGN1-215ENST00000485550 M0QY20 66 aa6.83□□□□□ -1.32
HMGN1-215ENST00000485550 GNG4P50150 75 aa6.83□□□□□ -1.32
HMGN1-215ENST00000485550 HNRNPA3P51991 378 aaKnown RBP6.83□□□□□ -1.32
HMGN1-215ENST00000485550 NKX2-5P52952 324 aaPredicted RBP6.83□□□□□ -1.32
HMGN1-215ENST00000485550 PKIAP61925 76 aa6.83□□□□□ -1.32
HMGN1-215ENST00000485550 MED9Q9NWA0 146 aa6.83□□□□□ -1.32
HMGN1-215ENST00000485550 TRAV1-1A0A0B4J248 108 aa6.82□□□□□ -1.32
HMGN1-215ENST00000485550 IGHV1-24A0A0C4DH33 117 aa6.82□□□□□ -1.32
HMGN1-215ENST00000485550 P01737 135 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms