RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ZNRF2Q8NHG8 242 aa8.68□□□□□ -1.02
SEC61A1-205ENST00000483956 LENEPQ9Y5L5 61 aa8.68□□□□□ -1.02
SEC61A1-205ENST00000483956 U3KQE9 123 aa8.68□□□□□ -1.02
SEC61A1-205ENST00000483956 TMEM223A0PJW6 202 aa8.68□□□□□ -1.02
SEC61A1-205ENST00000483956 DPH3Q96FX2 82 aa8.68□□□□□ -1.02
SEC61A1-205ENST00000483956 ZFYVE26Q68DK2 2539 aa8.68□□□□□ -1.02
SEC61A1-205ENST00000483956 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 ICOSQ9Y6W8 199 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 IGHV3-64A0A075B6Q5 118 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 C11orf71Q6IPW1 123 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 ATP6V0E1O15342 81 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 ECSCRQ19T08 205 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 PAPPA-AS1Q5QFB9 102 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 Q6ZSV7 163 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 DSCR8Q96T75 97 aa8.67□□□□□ -1.02
SEC61A1-205ENST00000483956 WNK2Q9Y3S1 2297 aa8.66□□□□□ -1.02
SEC61A1-205ENST00000483956 TRBV7-1A0A0A6YYK4 115 aa8.66□□□□□ -1.02
SEC61A1-205ENST00000483956 IGHV3-66A0A0C4DH42 116 aa8.66□□□□□ -1.02
SEC61A1-205ENST00000483956 SIRPDQ9H106 197 aa8.66□□□□□ -1.02
SEC61A1-205ENST00000483956 TP53TG1Q9Y2A0 90 aa8.66□□□□□ -1.02
SEC61A1-205ENST00000483956 LRBAP50851 2863 aa8.66□□□□□ -1.02
SEC61A1-205ENST00000483956 Q5XG85 94 aa8.66□□□□□ -1.02
SEC61A1-205ENST00000483956 CLEC19AQ6UXS0 136 aa8.66□□□□□ -1.02
SEC61A1-205ENST00000483956 TRAV8-3A0A0A6YYJ7 113 aa8.65□□□□□ -1.02
SEC61A1-205ENST00000483956 TRACP01848 142 aa8.65□□□□□ -1.02
SEC61A1-205ENST00000483956 LINC00643Q86TS7 51 aa8.65□□□□□ -1.02
SEC61A1-205ENST00000483956 PTPRQQ9UMZ3 2332 aa8.65□□□□□ -1.02
SEC61A1-205ENST00000483956 M0R381 172 aa8.65□□□□□ -1.02
SEC61A1-205ENST00000483956 ATP5G1P05496 136 aa8.65□□□□□ -1.02
SEC61A1-205ENST00000483956 RPL39P62891 51 aaKnown RBP8.65□□□□□ -1.02
SEC61A1-205ENST00000483956 PRR9Q5T870 116 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 C9orf139Q6ZV77 190 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 ITLN2Q8WWU7 325 aaPredicted RBP8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 DUX5Q96PT3 197 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 ABCA4P78363 2273 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 IGIPA6NJ69 53 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 LST1O00453 97 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 MGPP08493 103 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 ZFP36P26651 326 aaKnown RBP8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 ACACBO00763 2458 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 IGHV3OR16-13A0A075B7E8 117 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 IGHV3-74A0A0B4J1X5 117 aa8.64□□□□□ -1.03
SEC61A1-205ENST00000483956 CSMD1Q96PZ7 3565 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 ACYP1P07311 99 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 MED14OSP0DP75 135 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 NSUN5P1Q3KNT7 163 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 DPH3P1Q9H4G8 78 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 COX6CP09669 75 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 RNF152Q8N8N0 203 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 ZNF580Q9UK33 172 aa8.63□□□□□ -1.03
SEC61A1-205ENST00000483956 ADARB2-AS1A8MUL3 147 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 ZFAND2AQ8N6M9 145 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 MRAPQ8TCY5 172 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 C16orf92Q96LL3 132 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 LINC00477Q96M19 166 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 SPANXDQ9BXN6 97 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 IGHV3-49A0A0A0MS15 119 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 G3V318 75 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 PRSS2P07478 247 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 RHOHQ15669 191 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 SPANXCQ9NY87 97 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 HRNRQ86YZ3 2850 aaPredicted RBP8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 PPP1R17O96001 155 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 C20orf173Q96LM9 149 aa8.62□□□□□ -1.03
SEC61A1-205ENST00000483956 CACNA1BQ00975 2339 aa8.61□□□□□ -1.03
SEC61A1-205ENST00000483956 I3L3M4 83 aa8.61□□□□□ -1.03
SEC61A1-205ENST00000483956 LEPROTO15243 131 aa8.61□□□□□ -1.03
SEC61A1-205ENST00000483956 TMEM258P61165 79 aa8.61□□□□□ -1.03
SEC61A1-205ENST00000483956 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
SEC61A1-205ENST00000483956 UCNP55089 124 aa8.61□□□□□ -1.03
SEC61A1-205ENST00000483956 NPC2P61916 151 aa8.61□□□□□ -1.03
SEC61A1-205ENST00000483956 SPTBN1Q01082 2364 aaKnown RBP8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 IGHV1-69DA0A0B4J2H0 117 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 FAM223BA6NKX1 122 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 ATOX1O00244 68 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 SAA4P35542 130 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 C19orf54Q5BKX5 351 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 FAM223AQ8IWN6 122 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 DCANP1Q8TF63 244 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 AKAP6Q13023 2319 aa8.6□□□□□ -1.03
SEC61A1-205ENST00000483956 SOCS3O14543 225 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 IGF1P05019 195 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 GPHB5Q86YW7 130 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 C5orf56Q8N8D9 126 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 OPRPNQ99935 248 aaPredicted RBP8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 PHLDA3Q9Y5J5 127 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 MAP1AP78559 2803 aaPredicted RBP8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 K7ENP7 123 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 NXPH4O95158 308 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 CXCL5P42830 114 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 HIST1H4AP62805 103 aaKnown RBP8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 JPT2Q9H910 190 aa8.59□□□□□ -1.03
SEC61A1-205ENST00000483956 RS1O15537 224 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms