RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 C7orf71A4D174 169 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 LYRM9A8MSI8 78 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 INAFM1C9JVW0 142 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 H3BVH4 76 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 K7EQG2 157 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 PRB1P04280 392 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 HLA-DRB4P13762 266 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 EVI2AP22794 236 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 HILS1P60008 231 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 LINC00173Q6ZV60 143 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 NRACQ8N912 160 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 HLA-DRB4X5D2U9 266 aa5.7□□□□□ -1.5
SNX13-208ENST00000482558 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
SNX13-208ENST00000482558 IGLV2-18A0A075B6J9 118 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 IGHV4OR15-8A0A075B7B6 117 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 A0A087WW49 117 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 TRAV12-1A0A0B4J245 112 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 MUC21A0A0G2JKD1 596 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 A0A0J9YX75 114 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 MUC21A0A140T8X8 626 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 LINC01619G3V211 115 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 NCR2O95944 276 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 MUC21Q5SSG8 566 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 C4orf3Q8WVX3 66 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 PTH2Q96A98 100 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 SMIM2Q9BVW6 85 aa5.69□□□□□ -1.5
SNX13-208ENST00000482558 FLNCQ14315 2725 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 IGLV5-37A0A075B6J1 123 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 SMKR1H3BMG3 65 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.68□□□□□ -1.5
SNX13-208ENST00000482558 PRSS1P07477 247 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 PLNP26678 52 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 SEC11AP67812 179 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 BATFQ16520 125 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 PRR9Q5T870 116 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 ORAOV1Q8WV07 137 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 FOXC2Q99958 501 aa5.68□□□□□ -1.5
SNX13-208ENST00000482558 TIMM8BQ9Y5J9 83 aaPredicted RBP5.68□□□□□ -1.5
SNX13-208ENST00000482558 ANKRD17O75179 2603 aaKnown RBP5.68□□□□□ -1.5
SNX13-208ENST00000482558 UBR5O95071 2799 aaPredicted RBP5.67□□□□□ -1.5
SNX13-208ENST00000482558 ZNF462Q96JM2 2506 aa5.67□□□□□ -1.5
SNX13-208ENST00000482558 CD5LO43866 347 aa5.67□□□□□ -1.5
SNX13-208ENST00000482558 DPM2O94777 84 aa5.67□□□□□ -1.5
SNX13-208ENST00000482558 IGKCP01834 107 aa5.67□□□□□ -1.5
SNX13-208ENST00000482558 RNASE3P12724 160 aaKnown RBP5.67□□□□□ -1.5
SNX13-208ENST00000482558 CMC4P56277 68 aaPredicted RBP5.67□□□□□ -1.5
SNX13-208ENST00000482558 SYNJ2BPP57105 145 aa5.67□□□□□ -1.5
SNX13-208ENST00000482558 ODF3L2Q3SX64 289 aa5.67□□□□□ -1.5
SNX13-208ENST00000482558 TMEM158Q8WZ71 300 aa5.67□□□□□ -1.5
SNX13-208ENST00000482558 FAM208BQ5VWN6 2430 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 IGHV1OR15-1A0A075B7D0 117 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 TRBV6-5A0A0K0K1A5 114 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 A8MTW9 85 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 TMEM238C9JI98 176 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 CD7P09564 240 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 PRB4P10163 310 aaPredicted RBP5.66□□□□□ -1.5
SNX13-208ENST00000482558 ZNF25P17030 456 aaPredicted RBP5.66□□□□□ -1.5
SNX13-208ENST00000482558 TCTEX1D4Q5JR98 221 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 TOMM6Q96B49 74 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 C9orf85Q96MD7 179 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 KIR2DL4Q99706 377 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 LINC00467Q9BRT7 94 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 SPANXB1Q9NS25 103 aaPredicted RBP5.66□□□□□ -1.5
SNX13-208ENST00000482558 HIGD1BQ9P298 99 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 CSPG4Q6UVK1 2322 aa5.66□□□□□ -1.5
SNX13-208ENST00000482558 FLNBO75369 2602 aaKnown RBP5.66□□□□□ -1.5
SNX13-208ENST00000482558 LRRK2Q5S007 2527 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 IGKV3-7A0A075B6H7 116 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 A0A087WX48 190 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 IGHV3-16A0A0C4DH30 117 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 A6NDN8 102 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 F6UB75 175 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 H7C1H1 209 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 ZNF688P0C7X2 276 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 HINT1P49773 126 aaPredicted RBP5.65□□□□□ -1.5
SNX13-208ENST00000482558 HSD52Q0P140 79 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 TMEM97Q5BJF2 176 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 C14orf178Q8N769 122 aaPredicted RBP5.65□□□□□ -1.5
SNX13-208ENST00000482558 STPG4Q8N801 248 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 RASL10AQ92737 203 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 TMEM141Q96I45 108 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 TMEM208Q9BTX3 173 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 EDA2RQ9HAV5 297 aa5.65□□□□□ -1.5
SNX13-208ENST00000482558 ASH1LQ9NR48 2969 aaKnown RBP5.65□□□□□ -1.51
SNX13-208ENST00000482558 CREBBPQ92793 2442 aa5.65□□□□□ -1.51
SNX13-208ENST00000482558 NAV2Q8IVL1 2488 aa5.65□□□□□ -1.51
SNX13-208ENST00000482558 TRAV12-3A0A0B4J271 114 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 GNRH2O43555 120 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 OXTP01178 125 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 MGPP08493 103 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 BVES-AS1Q5T3Y7 98 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 TRPT1Q86TN4 253 aaKnown RBP5.64□□□□□ -1.51
SNX13-208ENST00000482558 MAPK1IP1LQ8NDC0 245 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 DYNLRB2Q8TF09 96 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 SCGB3A1Q96QR1 104 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 KRTAP1-5Q9BYS1 174 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 CYSLTR1Q9Y271 337 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
SNX13-208ENST00000482558 USP9YO00507 2555 aaPredicted RBP5.64□□□□□ -1.51
SNX13-208ENST00000482558 CR1P17927 2039 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms