RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CRIP2P52943 208 aaPredicted RBP9.56□□□□□ -0.88
VPS52-218ENST00000482399 DUX3Q96PT4 197 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 MTORP42345 2549 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 HRNRQ86YZ3 2850 aaPredicted RBP9.56□□□□□ -0.88
VPS52-218ENST00000482399 IGHV3-16A0A0C4DH30 117 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 FAM223BA6NKX1 122 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 NDUFA4O00483 81 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 EBI3Q14213 229 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 FAM223AQ8IWN6 122 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 SPATA25Q9BR10 227 aa9.56□□□□□ -0.88
VPS52-218ENST00000482399 A8MZ25 164 aa9.55□□□□□ -0.88
VPS52-218ENST00000482399 MRPL53Q96EL3 112 aaKnown RBP9.55□□□□□ -0.88
VPS52-218ENST00000482399 TNFRSF18Q9Y5U5 241 aa9.55□□□□□ -0.88
VPS52-218ENST00000482399 C10orf99Q6UWK7 81 aa9.55□□□□□ -0.88
VPS52-218ENST00000482399 PRRC2AP48634 2157 aaKnown RBP9.54□□□□□ -0.88
VPS52-218ENST00000482399 IGKV3OR2-268A0A0C4DH90 116 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 Q8N1Y9 231 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 PSMG3-AS1Q96PY0 264 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 PRO0461Q9UI25 63 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 HIST2H2BDQ6DRA6 164 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 C3orf56Q8N813 242 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 EPG5Q9HCE0 2579 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 MUC4Q99102 2169 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 IGHV1-69DA0A0B4J2H0 117 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 IGHV1-69P01742 117 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 CRYGDP07320 174 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 SCGB1A1P11684 91 aa9.54□□□□□ -0.88
VPS52-218ENST00000482399 COX6CP09669 75 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 LMO4P61968 165 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 SHISA2Q6UWI4 295 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 C2orf82Q6UX34 121 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 TIMM21Q9BVV7 248 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 IGHV4-61A0A0C4DH41 118 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 GATA3P23771 443 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 TSHBP01222 138 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 PROK1P58294 105 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 GPHB5Q86YW7 130 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 LENEPQ9Y5L5 61 aa9.53□□□□□ -0.88
VPS52-218ENST00000482399 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
VPS52-218ENST00000482399 TEX49A0A1B0GTD5 131 aa9.52□□□□□ -0.89
VPS52-218ENST00000482399 Q6ZSV7 163 aa9.52□□□□□ -0.89
VPS52-218ENST00000482399 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
VPS52-218ENST00000482399 PKD1L2Q7Z442 2459 aa9.52□□□□□ -0.89
VPS52-218ENST00000482399 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 C11orf71Q6IPW1 123 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 TMEM141Q96I45 108 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.51□□□□□ -0.89
VPS52-218ENST00000482399 IGKV2-29A2NJV5 120 aaPredicted RBP9.51□□□□□ -0.89
VPS52-218ENST00000482399 IGHV3-30P01768 117 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 IGHV3-30-5P0DP03 117 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 UBE2D1P51668 147 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 CDIP1Q9H305 208 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 HIVEP2P31629 2446 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 IGHV4-4A0A075B6R2 117 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 TMEM262E9PQX1 116 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 C11orf44Q8N8P7 122 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 SLC25A29Q8N8R3 303 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 ITLN2Q8WWU7 325 aaPredicted RBP9.51□□□□□ -0.89
VPS52-218ENST00000482399 PIMREGQ9BSJ6 248 aa9.51□□□□□ -0.89
VPS52-218ENST00000482399 FHL3Q13643 280 aa9.5□□□□□ -0.89
VPS52-218ENST00000482399 ATXN8Q156A1 80 aa9.5□□□□□ -0.89
VPS52-218ENST00000482399 CLEC2BQ92478 149 aa9.5□□□□□ -0.89
VPS52-218ENST00000482399 USMG5Q96IX5 58 aa9.5□□□□□ -0.89
VPS52-218ENST00000482399 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
VPS52-218ENST00000482399 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 M0R2P5 195 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 CCL19Q99731 98 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 LINC01546A6NGU7 62 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 IGIPA6NJ69 53 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 RPL13AP40429 203 aaKnown RBP9.49□□□□□ -0.89
VPS52-218ENST00000482399 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 NRGNQ92686 78 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 MEIG1Q5JSS6 88 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 U3KQE9 123 aa9.49□□□□□ -0.89
VPS52-218ENST00000482399 I3L3M4 83 aa9.48□□□□□ -0.89
VPS52-218ENST00000482399 GNLYP22749 145 aa9.48□□□□□ -0.89
VPS52-218ENST00000482399 DEFB131AP59861 70 aa9.48□□□□□ -0.89
VPS52-218ENST00000482399 POLR2KP53803 58 aaKnown RBP9.48□□□□□ -0.89
VPS52-218ENST00000482399 C19orf84I3L1E1 186 aa9.48□□□□□ -0.89
VPS52-218ENST00000482399 C15orf53Q8NAA6 179 aa9.48□□□□□ -0.89
VPS52-218ENST00000482399 LINC01587Q99440 93 aa9.48□□□□□ -0.89
VPS52-218ENST00000482399 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.47□□□□□ -0.89
VPS52-218ENST00000482399 RHODO00212 210 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 COX6B1P14854 86 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 FBXL19-AS1Q494R0 122 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 LINC01620Q4KN68 170 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 ITPR1Q14643 2758 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 IGHV3-33P01772 117 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 IGHV3-30-3P0DP02 117 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 ZNF22P17026 224 aaPredicted RBP9.47□□□□□ -0.89
VPS52-218ENST00000482399 TIMM17AQ99595 171 aa9.47□□□□□ -0.89
VPS52-218ENST00000482399 TRAV4A0A0B4J268 109 aa9.46□□□□□ -0.89
VPS52-218ENST00000482399 TCTEX1D4Q5JR98 221 aa9.46□□□□□ -0.89
VPS52-218ENST00000482399 ZANQ9Y493 2812 aa9.46□□□□□ -0.89
VPS52-218ENST00000482399 CRYBG3Q68DQ2 2970 aa9.46□□□□□ -0.89
VPS52-218ENST00000482399 H3BMM0 161 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms