RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 DYNLRB2Q8TF09 96 aa10.67□□□□□ -0.7
CHD3-211ENST00000481999 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
CHD3-211ENST00000481999 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
CHD3-211ENST00000481999 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
CHD3-211ENST00000481999 FXYD2P54710 66 aa10.66□□□□□ -0.7
CHD3-211ENST00000481999 TEX29Q8N6K0 151 aa10.66□□□□□ -0.7
CHD3-211ENST00000481999 TM2D2Q9BX73 214 aa10.66□□□□□ -0.7
CHD3-211ENST00000481999 HILS1P60008 231 aa10.66□□□□□ -0.7
CHD3-211ENST00000481999 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
CHD3-211ENST00000481999 FAM159AQ6UWV7 190 aa10.66□□□□□ -0.7
CHD3-211ENST00000481999 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
CHD3-211ENST00000481999 POM121L12Q8N7R1 296 aa10.66□□□□□ -0.7
CHD3-211ENST00000481999 NAA38Q9BRA0 125 aaKnown RBP10.66□□□□□ -0.7
CHD3-211ENST00000481999 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
CHD3-211ENST00000481999 PEMTQ9UBM1 199 aa10.65□□□□□ -0.7
CHD3-211ENST00000481999 CHTOPQ9Y3Y2 248 aaKnown RBP10.65□□□□□ -0.7
CHD3-211ENST00000481999 NSUN5P1Q3KNT7 163 aa10.65□□□□□ -0.7
CHD3-211ENST00000481999 C2orf66Q6UXQ4 117 aa10.65□□□□□ -0.7
CHD3-211ENST00000481999 NEXN-AS1Q8NBZ9 246 aa10.65□□□□□ -0.7
CHD3-211ENST00000481999 K7ERU9 68 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 FABP2P12104 132 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 TAL2Q16559 108 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 CEND1Q8N111 149 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 Q8N1Y9 231 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 OR5A1Q8NGJ0 315 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 A0A087WWL8 130 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 MAPKAPK5-AS1Q8N8E1 139 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 ZNF418Q8TF45 676 aaPredicted RBP10.64□□□□□ -0.71
CHD3-211ENST00000481999 SPCS1Q9Y6A9 102 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 NBEAL2Q6ZNJ1 2754 aa10.64□□□□□ -0.71
CHD3-211ENST00000481999 TMEM238LA0A1B0GVL6 79 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 KRTAP10-3P60369 221 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 FHL3Q13643 280 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 COTL1Q14019 142 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 SAMD5Q5TGI4 173 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 CSTL1Q9H114 145 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 MAP6D1Q9H9H5 199 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 RPL32P62910 135 aaKnown RBP10.63□□□□□ -0.71
CHD3-211ENST00000481999 FOXI2Q6ZQN5 318 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 ZNF256Q9Y2P7 627 aaPredicted RBP10.63□□□□□ -0.71
CHD3-211ENST00000481999 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
CHD3-211ENST00000481999 OR11H12B2RN74 326 aa10.62□□□□□ -0.71
CHD3-211ENST00000481999 LINC00315P59091 139 aa10.62□□□□□ -0.71
CHD3-211ENST00000481999 OR11H2Q8NH07 326 aa10.62□□□□□ -0.71
CHD3-211ENST00000481999 BAALCQ8WXS3 180 aa10.62□□□□□ -0.71
CHD3-211ENST00000481999 LINC01549A6NIU2 74 aa10.61□□□□□ -0.71
CHD3-211ENST00000481999 H3BMM0 161 aa10.61□□□□□ -0.71
CHD3-211ENST00000481999 ODF3Q96PU9 254 aa10.61□□□□□ -0.71
CHD3-211ENST00000481999 WFDC10AQ9H1F0 79 aa10.61□□□□□ -0.71
CHD3-211ENST00000481999 NHP2Q9NX24 153 aaKnown RBP10.61□□□□□ -0.71
CHD3-211ENST00000481999 ADARB2-AS1A8MUL3 147 aa10.61□□□□□ -0.71
CHD3-211ENST00000481999 FAM74A4Q5TZK3 123 aa10.61□□□□□ -0.71
CHD3-211ENST00000481999 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
CHD3-211ENST00000481999 PHLDA1Q8WV24 401 aaPredicted RBP10.61□□□□□ -0.71
CHD3-211ENST00000481999 VPS25Q9BRG1 176 aa10.61□□□□□ -0.71
CHD3-211ENST00000481999 TSSC4Q9Y5U2 329 aaPredicted RBP10.61□□□□□ -0.71
CHD3-211ENST00000481999 K7ERJ3 54 aa10.6□□□□□ -0.71
CHD3-211ENST00000481999 ODF3L2Q3SX64 289 aa10.6□□□□□ -0.71
CHD3-211ENST00000481999 CYSLTR1Q9Y271 337 aa10.6□□□□□ -0.71
CHD3-211ENST00000481999 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
CHD3-211ENST00000481999 MYMXA0A1B0GTQ4 84 aa10.6□□□□□ -0.71
CHD3-211ENST00000481999 PRSS29PA6NIE9 313 aa10.6□□□□□ -0.71
CHD3-211ENST00000481999 PROK1P58294 105 aa10.59□□□□□ -0.71
CHD3-211ENST00000481999 HIST1H4GQ99525 98 aa10.59□□□□□ -0.71
CHD3-211ENST00000481999 C16orf95Q9H693 158 aa10.59□□□□□ -0.71
CHD3-211ENST00000481999 SUMO4Q6EEV6 95 aa10.59□□□□□ -0.71
CHD3-211ENST00000481999 SPATA3Q8NHX4 192 aa10.59□□□□□ -0.71
CHD3-211ENST00000481999 E9PLD3 99 aa10.58□□□□□ -0.72
CHD3-211ENST00000481999 VCYO14598 125 aa10.58□□□□□ -0.72
CHD3-211ENST00000481999 SAP30O75446 220 aa10.58□□□□□ -0.72
CHD3-211ENST00000481999 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
CHD3-211ENST00000481999 IGHV1OR15-1A0A075B7D0 117 aa10.58□□□□□ -0.72
CHD3-211ENST00000481999 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
CHD3-211ENST00000481999 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
CHD3-211ENST00000481999 KIR2DL4Q99706 377 aa10.57□□□□□ -0.72
CHD3-211ENST00000481999 F5H697 171 aa10.57□□□□□ -0.72
CHD3-211ENST00000481999 ZFP2Q6ZN57 461 aa10.57□□□□□ -0.72
CHD3-211ENST00000481999 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
CHD3-211ENST00000481999 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
CHD3-211ENST00000481999 TP53TG1Q9Y2A0 90 aa10.57□□□□□ -0.72
CHD3-211ENST00000481999 TRBV7-3A0A075B6L6 115 aa10.56□□□□□ -0.72
CHD3-211ENST00000481999 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
CHD3-211ENST00000481999 PRADC1Q9BSG0 188 aa10.56□□□□□ -0.72
CHD3-211ENST00000481999 IGHV3-73A0A0B4J1V6 119 aa10.56□□□□□ -0.72
CHD3-211ENST00000481999 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
CHD3-211ENST00000481999 C12orf74Q32Q52 190 aa10.56□□□□□ -0.72
CHD3-211ENST00000481999 PAPPA-AS1Q5QFB9 102 aa10.56□□□□□ -0.72
CHD3-211ENST00000481999 TMEM141Q96I45 108 aa10.56□□□□□ -0.72
CHD3-211ENST00000481999 IGHV3OR16-12A0A075B7B8 117 aa10.55□□□□□ -0.72
CHD3-211ENST00000481999 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
CHD3-211ENST00000481999 IGLL5B9A064 214 aa10.55□□□□□ -0.72
CHD3-211ENST00000481999 SPAG8Q99932 426 aaPredicted RBP10.55□□□□□ -0.72
CHD3-211ENST00000481999 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
CHD3-211ENST00000481999 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
CHD3-211ENST00000481999 CRYGDP07320 174 aa10.54□□□□□ -0.72
CHD3-211ENST00000481999 SCGB2A2Q13296 93 aa10.54□□□□□ -0.72
CHD3-211ENST00000481999 TIMM17AQ99595 171 aa10.54□□□□□ -0.72
CHD3-211ENST00000481999 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
CHD3-211ENST00000481999 TSHBP01222 138 aa10.54□□□□□ -0.72
CHD3-211ENST00000481999 RIPPLY3P57055 190 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms