RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 H7C423 109 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 K7EMI3 77 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 SIVA1O15304 175 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 LY6G6CO95867 125 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 NUDT3O95989 172 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 PPBPP02775 128 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 RIGQ13278 110 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 RHEBQ15382 184 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 ADIRFQ15847 76 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 NFE4Q86UQ8 179 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 UBE2DNLQ8IWF7 75 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 NUP35Q8NFH5 326 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 ATP6V0E2Q8NHE4 81 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 Q9H8V8 135 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 NIT2Q9NQR4 276 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 LAMTOR2Q9Y2Q5 125 aa3.49□□□□□ -1.85
HDAC6-223ENST00000480525 FRAS1Q86XX4 4008 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 TMSB15BA0A087X1C1 80 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 TRAV8-6A0A0B4J262 113 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 IGHV3-38A0A0C4DH36 116 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 A0A0J9YY99 117 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 TRBV27A0A0K0K1C4 114 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 A0A1B0GUV1 79 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 PRSS47A8MTI9 375 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 F8W036 122 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 EVI2AP22794 236 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 ELOBQ15370 118 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 ZNF56Q15929 161 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 NDUFA5Q16718 116 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 IQCJQ1A5X6 159 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 FAM74A4Q5TZK3 123 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 ATRAIDQ6UW56 229 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 NEXN-AS1Q8NBZ9 246 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 SAMD10Q9BYL1 202 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 COX11Q9Y6N1 276 aa3.48□□□□□ -1.85
HDAC6-223ENST00000480525 A0A087WWL8 130 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 TRBV6-8A0A0A6YYG3 113 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 GZMBP10144 247 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 ADCYAP1P18509 176 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 HBBP68871 147 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 SMAGPQ0VAQ4 97 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 TWIST1Q15672 202 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 KCNIP4Q6PIL6 250 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 Q6ZSN1 163 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 C14orf178Q8N769 122 aaPredicted RBP3.47□□□□□ -1.85
HDAC6-223ENST00000480525 C20orf78Q9BR46 151 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 JPT2Q9H910 190 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 MSRB1Q9NZV6 116 aa3.47□□□□□ -1.85
HDAC6-223ENST00000480525 CSDC2Q9Y534 153 aaKnown RBP3.47□□□□□ -1.85
HDAC6-223ENST00000480525 TRBV25-1A0A075B6N4 114 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 TRAV8-3A0A0A6YYJ7 113 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 LINC01549A6NIU2 74 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 IBA57-AS1B1ANH7 110 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 SNAPINO95295 136 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 MT-ND6P03923 174 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 NPSP0C0P6 89 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 ZNF25P17030 456 aaPredicted RBP3.46□□□□□ -1.86
HDAC6-223ENST00000480525 RAB4AP20338 218 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 POLR2KP53803 58 aaKnown RBP3.46□□□□□ -1.86
HDAC6-223ENST00000480525 C1orf134Q5TEV5 83 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 FAM104BQ5XKR9 115 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 SUMO4Q6EEV6 95 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 COMMD7Q86VX2 200 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 NIT1Q86X76 327 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 SVBPQ8N300 66 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 C6orf223Q8N319 242 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 PRR34Q9NV39 138 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 TNFRSF18Q9Y5U5 241 aa3.46□□□□□ -1.86
HDAC6-223ENST00000480525 IGHV1-24A0A0C4DH33 117 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 LOC100131303A0A0U1RQF7 123 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 F5H697 171 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 CCL25O15444 150 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 Q0VG73 95 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 CDPF1Q6NVV7 123 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 Q6ZRN7 208 aaPredicted RBP3.45□□□□□ -1.86
HDAC6-223ENST00000480525 MRPL52Q86TS9 123 aaKnown RBP3.45□□□□□ -1.86
HDAC6-223ENST00000480525 RMI2Q96E14 147 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 RNF185Q96GF1 192 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 TPPP3Q9BW30 176 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 HECTD4Q9Y4D8 3996 aa3.45□□□□□ -1.86
HDAC6-223ENST00000480525 DNAH17Q9UFH2 4485 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 FAT2Q9NYQ8 4349 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 DNAH10Q8IVF4 4471 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 IGHV3-73A0A0B4J1V6 119 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 TRAV8-4A0A0B4J246 113 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 GAGE12JA6NER3 117 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 SDHAF1A6NFY7 115 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 I3L3M4 83 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 VCYO14598 125 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 RTL8CO15255 209 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 HLA-DQA1P01909 254 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 ESDP10768 282 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 S100PP25815 95 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 G0S2P27469 103 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 SUMO2P61956 95 aaKnown RBP3.44□□□□□ -1.86
HDAC6-223ENST00000480525 GAGE1Q13065 139 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 GAGE4Q13068 117 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 GAGE5Q13069 117 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 COTL1Q14019 142 aa3.44□□□□□ -1.86
HDAC6-223ENST00000480525 MIAQ16674 131 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms