RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 LINC01556Q5JQF7 62 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 ZNF506Q5JVG8 444 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 C1orf134Q5TEV5 83 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 LYPD5Q6UWN5 251 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 Q6ZQT7 251 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 FAM231DQ6ZW35 169 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 ZFP82Q8N141 532 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 SLC25A29Q8N8R3 303 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 PCNPQ8WW12 178 aaKnown RBP3.35□□□□□ -1.87
PTCD3-213ENST00000480102 SFRP2Q96HF1 295 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 PARLQ9H300 379 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 MRPL16Q9NX20 251 aaKnown RBP3.35□□□□□ -1.87
PTCD3-213ENST00000480102 MSRB1Q9NZV6 116 aa3.35□□□□□ -1.87
PTCD3-213ENST00000480102 RTL8CO15255 209 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 SIVA1O15304 175 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 IGLV2-8P01709 118 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 CRYGDP07320 174 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 IGLC6P0CF74 106 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 VPREB1P12018 145 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 HTN3P15516 51 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 GNG4P50150 75 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 RAB4BP61018 213 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 CACNG7P62955 275 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 TMEM97Q5BJF2 176 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 LELP1Q5T871 98 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 PRR27Q6MZM9 219 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 UBE2DNLQ8IWF7 75 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 C6orf223Q8N319 242 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 TMEM18Q96B42 140 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 GFRA4Q9GZZ7 299 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 GNG13Q9P2W3 67 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 NAGKQ9UJ70 344 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 RPH3ALQ9UNE2 315 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 PHLDA3Q9Y5J5 127 aa3.34□□□□□ -1.87
PTCD3-213ENST00000480102 TRBV20OR9-2A0A075B6H5 130 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 RBFOX3A6NFN3 312 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 VCYO14598 125 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 EVI2AP22794 236 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 CTRLP40313 264 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 CENPWQ5EE01 88 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 TEX261Q6UWH6 196 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 SGK494Q96LW2 274 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 AP1S3Q96PC3 154 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 GTSF1LQ9H1H1 148 aa3.33□□□□□ -1.88
PTCD3-213ENST00000480102 TRBV7-3A0A075B6L6 115 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 TRAV8-6A0A0B4J262 113 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 A0A0J9YY99 117 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 IBA57-AS1B1ANH7 110 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 H7C1H1 209 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 P01737 135 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 LINC00315P59091 139 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 ALKAL2Q6UX46 152 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 Q6ZRN7 208 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-213ENST00000480102 DAZ4Q86SG3 579 aaKnown RBP3.32□□□□□ -1.88
PTCD3-213ENST00000480102 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-213ENST00000480102 FER1L6-AS1Q8NA97 138 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 ATP6V0E2Q8NHE4 81 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 OCC1Q8TAD7 63 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 PGLYRP4Q96LB8 373 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 DNAJC30Q96LL9 226 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 DAZ3Q9NR90 486 aaKnown RBP3.32□□□□□ -1.88
PTCD3-213ENST00000480102 OSTCQ9NRP0 149 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 MED9Q9NWA0 146 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 KIF25-AS1Q9Y6Z4 181 aa3.32□□□□□ -1.88
PTCD3-213ENST00000480102 A8MWL6 223 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 H3BVH4 76 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 SFTA3P0C7M3 94 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 TRGC1P0CF51 173 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 PRB4P10163 310 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-213ENST00000480102 RPL36AP83881 106 aaKnown RBP3.31□□□□□ -1.88
PTCD3-213ENST00000480102 ELOBQ15370 118 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 LBHQ53QV2 105 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-213ENST00000480102 ATRAIDQ6UW56 229 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 LINC01551Q86U37 167 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 DERL1Q9BUN8 251 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 KRTAP1-5Q9BYS1 174 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 HERC2O95714 4834 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 HSPG2P98160 4391 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 MUC4Q99102 2169 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 DNAH5Q8TE73 4624 aa3.31□□□□□ -1.88
PTCD3-213ENST00000480102 APOBP04114 4563 aaKnown RBP3.31□□□□□ -1.88
PTCD3-213ENST00000480102 TRAV8-3A0A0A6YYJ7 113 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 IGLV5-39A0A0G2JS06 123 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 A0A1B0GW15 77 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 M0QY20 66 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 M0R036 132 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 CDK2AP2O75956 126 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 UBE2D3P61077 147 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 UBE2D2P62837 147 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 IQCJQ1A5X6 159 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 SPANXN1Q5VSR9 72 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 OR2D3Q8NGH3 330 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 OR10AG1Q8NH19 301 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 TSKUQ8WUA8 353 aa3.3□□□□□ -1.88
PTCD3-213ENST00000480102 RPP21Q9H633 154 aaKnown RBP3.3□□□□□ -1.88
PTCD3-213ENST00000480102 KIAA1109Q2LD37 5005 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 TRBV6-8A0A0A6YYG3 113 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 TRBV6-5A0A0K0K1A5 114 aa3.29□□□□□ -1.88
PTCD3-213ENST00000480102 A0A1B0GUV1 79 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms