RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 IGHV3-30P01768 117 aa12.81□□□□□ -0.36
AGRN-208ENST00000479707 IGHV3-33P01772 117 aa12.81□□□□□ -0.36
AGRN-208ENST00000479707 IGHV3-30-3P0DP02 117 aa12.81□□□□□ -0.36
AGRN-208ENST00000479707 IGHV3-30-5P0DP03 117 aa12.81□□□□□ -0.36
AGRN-208ENST00000479707 GFRA4Q9GZZ7 299 aa12.81□□□□□ -0.36
AGRN-208ENST00000479707 M0QY20 66 aa12.8□□□□□ -0.36
AGRN-208ENST00000479707 SMIM15Q7Z3B0 74 aa12.8□□□□□ -0.36
AGRN-208ENST00000479707 A0A087WWC5 75 aa12.79□□□□□ -0.36
AGRN-208ENST00000479707 FAM231BA6NCW3 169 aa12.79□□□□□ -0.36
AGRN-208ENST00000479707 H7C1H1 209 aa12.79□□□□□ -0.36
AGRN-208ENST00000479707 A0A1B0GUT8 65 aa12.78□□□□□ -0.36
AGRN-208ENST00000479707 TNP2Q05952 138 aa12.78□□□□□ -0.36
AGRN-208ENST00000479707 RASL11AQ6T310 242 aa12.78□□□□□ -0.36
AGRN-208ENST00000479707 Q8N3U1 123 aa12.78□□□□□ -0.36
AGRN-208ENST00000479707 NUP35Q8NFH5 326 aa12.78□□□□□ -0.36
AGRN-208ENST00000479707 TRAV26-2A0A0B4J265 109 aa12.77□□□□□ -0.37
AGRN-208ENST00000479707 LINC01556Q5JQF7 62 aa12.77□□□□□ -0.37
AGRN-208ENST00000479707 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.77□□□□□ -0.37
AGRN-208ENST00000479707 NAT8BQ9UHF3 227 aa12.77□□□□□ -0.37
AGRN-208ENST00000479707 DNAJC30Q96LL9 226 aa12.76□□□□□ -0.37
AGRN-208ENST00000479707 FAT2Q9NYQ8 4349 aa12.76□□□□□ -0.37
AGRN-208ENST00000479707 SMIM27A0A1W2PRY6 76 aa12.75□□□□□ -0.37
AGRN-208ENST00000479707 RIGQ13278 110 aa12.75□□□□□ -0.37
AGRN-208ENST00000479707 C10orf126Q8N4M7 172 aa12.75□□□□□ -0.37
AGRN-208ENST00000479707 GATD1Q8NB37 220 aa12.75□□□□□ -0.37
AGRN-208ENST00000479707 NIT2Q9NQR4 276 aa12.75□□□□□ -0.37
AGRN-208ENST00000479707 TRBV6-8A0A0A6YYG3 113 aa12.74□□□□□ -0.37
AGRN-208ENST00000479707 A0A1B0GVY2 172 aa12.74□□□□□ -0.37
AGRN-208ENST00000479707 K7EP13 123 aa12.74□□□□□ -0.37
AGRN-208ENST00000479707 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
AGRN-208ENST00000479707 DEFB104AQ8WTQ1 72 aa12.74□□□□□ -0.37
AGRN-208ENST00000479707 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
AGRN-208ENST00000479707 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
AGRN-208ENST00000479707 COMMD7Q86VX2 200 aa12.73□□□□□ -0.37
AGRN-208ENST00000479707 TMEM262E9PQX1 116 aa12.72□□□□□ -0.37
AGRN-208ENST00000479707 UQCC3Q6UW78 93 aa12.72□□□□□ -0.37
AGRN-208ENST00000479707 NTM-AS1Q6ZSK4 140 aa12.72□□□□□ -0.37
AGRN-208ENST00000479707 NIT1Q86X76 327 aa12.72□□□□□ -0.37
AGRN-208ENST00000479707 RPL39LQ96EH5 51 aaKnown RBP12.72□□□□□ -0.37
AGRN-208ENST00000479707 TMEM191AQ9H0A3 160 aa12.72□□□□□ -0.37
AGRN-208ENST00000479707 Q9HAA7 133 aa12.72□□□□□ -0.37
AGRN-208ENST00000479707 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
AGRN-208ENST00000479707 BIRC6Q9NR09 4857 aa12.71□□□□□ -0.37
AGRN-208ENST00000479707 IBA57-AS1B1ANH7 110 aa12.71□□□□□ -0.37
AGRN-208ENST00000479707 PNRC1Q12796 327 aaPredicted RBP12.71□□□□□ -0.37
AGRN-208ENST00000479707 Q6ZRN7 208 aaPredicted RBP12.71□□□□□ -0.37
AGRN-208ENST00000479707 NFE4Q86UQ8 179 aa12.71□□□□□ -0.37
AGRN-208ENST00000479707 AMN1Q8IY45 258 aa12.71□□□□□ -0.37
AGRN-208ENST00000479707 TMEM218A2RU14 115 aa12.7□□□□□ -0.38
AGRN-208ENST00000479707 F8W036 122 aa12.7□□□□□ -0.38
AGRN-208ENST00000479707 ADCYAP1P18509 176 aa12.7□□□□□ -0.38
AGRN-208ENST00000479707 CAMPP49913 170 aa12.7□□□□□ -0.38
AGRN-208ENST00000479707 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
AGRN-208ENST00000479707 CHCHD5Q9BSY4 110 aa12.7□□□□□ -0.38
AGRN-208ENST00000479707 A0A087WX48 190 aa12.69□□□□□ -0.38
AGRN-208ENST00000479707 PPP1R2P9O14990 202 aa12.69□□□□□ -0.38
AGRN-208ENST00000479707 GAS8-AS1O95177 125 aa12.69□□□□□ -0.38
AGRN-208ENST00000479707 RAB4AP20338 218 aa12.69□□□□□ -0.38
AGRN-208ENST00000479707 TMEM97Q5BJF2 176 aa12.69□□□□□ -0.38
AGRN-208ENST00000479707 MRPL54Q6P161 138 aaKnown RBP12.69□□□□□ -0.38
AGRN-208ENST00000479707 KCNIP4Q6PIL6 250 aa12.69□□□□□ -0.38
AGRN-208ENST00000479707 TRBV25-1A0A075B6N4 114 aa12.67□□□□□ -0.38
AGRN-208ENST00000479707 MT-ND4LP03901 98 aa12.67□□□□□ -0.38
AGRN-208ENST00000479707 GAGE6Q13070 117 aa12.67□□□□□ -0.38
AGRN-208ENST00000479707 FRZBQ92765 325 aa12.67□□□□□ -0.38
AGRN-208ENST00000479707 ANAPC16Q96DE5 110 aa12.67□□□□□ -0.38
AGRN-208ENST00000479707 KLK12Q9UKR0 248 aa12.67□□□□□ -0.38
AGRN-208ENST00000479707 IGHV1-24A0A0C4DH33 117 aa12.66□□□□□ -0.38
AGRN-208ENST00000479707 LINC00862A6NCI5 91 aa12.66□□□□□ -0.38
AGRN-208ENST00000479707 SMKR1H3BMG3 65 aa12.66□□□□□ -0.38
AGRN-208ENST00000479707 PKD1P98161 4303 aa12.66□□□□□ -0.38
AGRN-208ENST00000479707 HECTD4Q9Y4D8 3996 aa12.65□□□□□ -0.38
AGRN-208ENST00000479707 NCR2O95944 276 aa12.65□□□□□ -0.38
AGRN-208ENST00000479707 COTL1Q14019 142 aa12.65□□□□□ -0.38
AGRN-208ENST00000479707 MPV17L2Q567V2 206 aa12.65□□□□□ -0.38
AGRN-208ENST00000479707 A0A1B0GW15 77 aa12.64□□□□□ -0.39
AGRN-208ENST00000479707 SDHAF1A6NFY7 115 aa12.64□□□□□ -0.39
AGRN-208ENST00000479707 PSCAO43653 123 aa12.64□□□□□ -0.39
AGRN-208ENST00000479707 RPS10P46783 165 aaKnown RBP12.64□□□□□ -0.39
AGRN-208ENST00000479707 IQCJQ1A5X6 159 aa12.64□□□□□ -0.39
AGRN-208ENST00000479707 ATRAIDQ6UW56 229 aa12.64□□□□□ -0.39
AGRN-208ENST00000479707 Q8N976 141 aa12.64□□□□□ -0.39
AGRN-208ENST00000479707 MRAP2Q96G30 205 aa12.64□□□□□ -0.39
AGRN-208ENST00000479707 CHCHD7Q9BUK0 85 aa12.64□□□□□ -0.39
AGRN-208ENST00000479707 HBBP68871 147 aa12.63□□□□□ -0.39
AGRN-208ENST00000479707 LAGE3Q14657 143 aa12.63□□□□□ -0.39
AGRN-208ENST00000479707 MRPL51Q4U2R6 128 aaKnown RBP12.63□□□□□ -0.39
AGRN-208ENST00000479707 FAM104BQ5XKR9 115 aa12.63□□□□□ -0.39
AGRN-208ENST00000479707 UBE2WQ96B02 151 aa12.63□□□□□ -0.39
AGRN-208ENST00000479707 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
AGRN-208ENST00000479707 SEC11CQ9BY50 192 aa12.63□□□□□ -0.39
AGRN-208ENST00000479707 ST20Q9HBF5 79 aa12.63□□□□□ -0.39
AGRN-208ENST00000479707 TRAV8-3A0A0A6YYJ7 113 aa12.62□□□□□ -0.39
AGRN-208ENST00000479707 PMCHP20382 165 aa12.62□□□□□ -0.39
AGRN-208ENST00000479707 AMTP48728 403 aa12.62□□□□□ -0.39
AGRN-208ENST00000479707 ELOBQ15370 118 aa12.62□□□□□ -0.39
AGRN-208ENST00000479707 SPATA12Q7Z6I5 190 aa12.62□□□□□ -0.39
AGRN-208ENST00000479707 TRBV6-5A0A0K0K1A5 114 aa12.61□□□□□ -0.39
AGRN-208ENST00000479707 A0A1B0GXF2 115 aa12.61□□□□□ -0.39
AGRN-208ENST00000479707 ANGP03950 147 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms