RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 NIT2Q9NQR4 276 aa9.59□□□□□ -0.87
PCIF1-202ENST00000479348 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
PCIF1-202ENST00000479348 TRAV8-6A0A0B4J262 113 aa9.58□□□□□ -0.88
PCIF1-202ENST00000479348 SIVA1O15304 175 aa9.58□□□□□ -0.88
PCIF1-202ENST00000479348 HBBP68871 147 aa9.58□□□□□ -0.88
PCIF1-202ENST00000479348 RHEBQ15382 184 aa9.58□□□□□ -0.88
PCIF1-202ENST00000479348 DAZ4Q86SG3 579 aaKnown RBP9.58□□□□□ -0.88
PCIF1-202ENST00000479348 GATD1Q8NB37 220 aa9.58□□□□□ -0.88
PCIF1-202ENST00000479348 DAZ3Q9NR90 486 aaKnown RBP9.58□□□□□ -0.88
PCIF1-202ENST00000479348 TMEM242Q9NWH2 141 aa9.58□□□□□ -0.88
PCIF1-202ENST00000479348 RYR3Q15413 4870 aa9.58□□□□□ -0.88
PCIF1-202ENST00000479348 A0A1B0GXF2 115 aa9.57□□□□□ -0.88
PCIF1-202ENST00000479348 K7EP13 123 aa9.57□□□□□ -0.88
PCIF1-202ENST00000479348 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
PCIF1-202ENST00000479348 TTC32Q5I0X7 151 aa9.57□□□□□ -0.88
PCIF1-202ENST00000479348 CLRN3Q8NCR9 226 aa9.57□□□□□ -0.88
PCIF1-202ENST00000479348 MRAP2Q96G30 205 aa9.57□□□□□ -0.88
PCIF1-202ENST00000479348 ALMS1Q8TCU4 4167 aa9.57□□□□□ -0.88
PCIF1-202ENST00000479348 IGLV2-18A0A075B6J9 118 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 NBDYA0A0U1RRE5 68 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 C7orf77A4D0Y5 90 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 RAB4AP20338 218 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 CAMPP49913 170 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 MRPL54Q6P161 138 aaKnown RBP9.56□□□□□ -0.88
PCIF1-202ENST00000479348 KCNIP4Q6PIL6 250 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 Q6ZR54 194 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 TRAV9-1A0A075B6T8 112 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 TRAV26-2A0A0B4J265 109 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 OR10J3Q5JRS4 329 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 FAM104BQ5XKR9 115 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 AMN1Q8IY45 258 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 SVBPQ8N300 66 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 RNF185Q96GF1 192 aa9.56□□□□□ -0.88
PCIF1-202ENST00000479348 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
PCIF1-202ENST00000479348 SNAPINO95295 136 aa9.55□□□□□ -0.88
PCIF1-202ENST00000479348 PPP1R17O96001 155 aa9.55□□□□□ -0.88
PCIF1-202ENST00000479348 APOC3P02656 99 aa9.55□□□□□ -0.88
PCIF1-202ENST00000479348 DNAH10OSP0CZ25 163 aa9.55□□□□□ -0.88
PCIF1-202ENST00000479348 S100PP25815 95 aa9.55□□□□□ -0.88
PCIF1-202ENST00000479348 WFDC10BQ8IUB3 73 aa9.55□□□□□ -0.88
PCIF1-202ENST00000479348 PLECQ15149 4684 aaKnown RBP9.54□□□□□ -0.88
PCIF1-202ENST00000479348 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
PCIF1-202ENST00000479348 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
PCIF1-202ENST00000479348 M0R2N4 97 aa9.54□□□□□ -0.88
PCIF1-202ENST00000479348 BTF3P20290 206 aaKnown RBP9.54□□□□□ -0.88
PCIF1-202ENST00000479348 RPS10P5Q9NQ39 176 aa9.54□□□□□ -0.88
PCIF1-202ENST00000479348 LINC01556Q5JQF7 62 aa9.53□□□□□ -0.88
PCIF1-202ENST00000479348 DNAH1Q9P2D7 4330 aa9.52□□□□□ -0.88
PCIF1-202ENST00000479348 PPBPP02775 128 aa9.52□□□□□ -0.89
PCIF1-202ENST00000479348 MRPL51Q4U2R6 128 aaKnown RBP9.52□□□□□ -0.89
PCIF1-202ENST00000479348 SLC7A5P1Q8MH63 180 aa9.52□□□□□ -0.89
PCIF1-202ENST00000479348 C10orf126Q8N4M7 172 aa9.52□□□□□ -0.89
PCIF1-202ENST00000479348 RPL39LQ96EH5 51 aaKnown RBP9.52□□□□□ -0.89
PCIF1-202ENST00000479348 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
PCIF1-202ENST00000479348 PKIAP61925 76 aa9.51□□□□□ -0.89
PCIF1-202ENST00000479348 C1orf134Q5TEV5 83 aa9.51□□□□□ -0.89
PCIF1-202ENST00000479348 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
PCIF1-202ENST00000479348 ST20Q9HBF5 79 aa9.51□□□□□ -0.89
PCIF1-202ENST00000479348 TRBV25-1A0A075B6N4 114 aa9.5□□□□□ -0.89
PCIF1-202ENST00000479348 IGHV1-24A0A0C4DH33 117 aa9.5□□□□□ -0.89
PCIF1-202ENST00000479348 NCR2O95944 276 aa9.5□□□□□ -0.89
PCIF1-202ENST00000479348 CKS2P33552 79 aa9.5□□□□□ -0.89
PCIF1-202ENST00000479348 COTL1Q14019 142 aa9.5□□□□□ -0.89
PCIF1-202ENST00000479348 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
PCIF1-202ENST00000479348 NTM-AS1Q6ZSK4 140 aa9.5□□□□□ -0.89
PCIF1-202ENST00000479348 LYSTQ99698 3801 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 VPS13DQ5THJ4 4388 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 PHOX2AO14813 284 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 GAS8-AS1O95177 125 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 COX19Q49B96 90 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 NIT1Q86X76 327 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 TMEM70Q9BUB7 260 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 KRTAP1-5Q9BYS1 174 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 URGCP-MRPS24S4R325 110 aa9.49□□□□□ -0.89
PCIF1-202ENST00000479348 TRBV24-1A0A075B6N3 115 aa9.48□□□□□ -0.89
PCIF1-202ENST00000479348 I3L3M4 83 aa9.48□□□□□ -0.89
PCIF1-202ENST00000479348 PMCHP20382 165 aa9.48□□□□□ -0.89
PCIF1-202ENST00000479348 RPS10P46783 165 aaKnown RBP9.48□□□□□ -0.89
PCIF1-202ENST00000479348 POLR2KP53803 58 aaKnown RBP9.48□□□□□ -0.89
PCIF1-202ENST00000479348 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
PCIF1-202ENST00000479348 NRACQ8N912 160 aa9.48□□□□□ -0.89
PCIF1-202ENST00000479348 C20orf78Q9BR46 151 aa9.48□□□□□ -0.89
PCIF1-202ENST00000479348 CHCHD5Q9BSY4 110 aa9.48□□□□□ -0.89
PCIF1-202ENST00000479348 A0A087WX48 190 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 SMKR1H3BMG3 65 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 VCYO14598 125 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
PCIF1-202ENST00000479348 RPL32P62910 135 aaKnown RBP9.47□□□□□ -0.89
PCIF1-202ENST00000479348 ELOBQ15370 118 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 LINC00336Q6ZUF6 198 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
PCIF1-202ENST00000479348 IBA57-AS1B1ANH7 110 aa9.46□□□□□ -0.9
PCIF1-202ENST00000479348 D6R8Y8 96 aa9.46□□□□□ -0.9
PCIF1-202ENST00000479348 TMEM262E9PQX1 116 aa9.46□□□□□ -0.9
PCIF1-202ENST00000479348 TNFRSF6BO95407 300 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms