RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 UBE2D2P62837 147 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 GAGE1Q13065 139 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 GAGE4Q13068 117 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 GAGE5Q13069 117 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 GAGE13Q4V321 117 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 TPPP3Q9BW30 176 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 Q9UF83 564 aa10.53□□□□□ -0.72
C9orf3-217ENST00000479161 MUC21A0A0G2JKD1 596 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 MUC21A0A140T8X8 626 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 PRSS29PA6NIE9 313 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 SRSF3P84103 164 aaKnown RBP10.52□□□□□ -0.73
C9orf3-217ENST00000479161 ZNF56Q15929 161 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 WFDC10BQ8IUB3 73 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 C15orf54Q8N8G6 183 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 FRZBQ92765 325 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 ISOC2Q96AB3 205 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 DPH3P1Q9H4G8 78 aa10.52□□□□□ -0.73
C9orf3-217ENST00000479161 RPL23P62829 140 aaKnown RBP10.51□□□□□ -0.73
C9orf3-217ENST00000479161 NFE4Q86UQ8 179 aa10.51□□□□□ -0.73
C9orf3-217ENST00000479161 KRTAP17-1Q9BYP8 105 aa10.51□□□□□ -0.73
C9orf3-217ENST00000479161 A0A1B0GVY2 172 aa10.5□□□□□ -0.73
C9orf3-217ENST00000479161 F5H697 171 aa10.5□□□□□ -0.73
C9orf3-217ENST00000479161 M0QY20 66 aa10.5□□□□□ -0.73
C9orf3-217ENST00000479161 TMEM97Q5BJF2 176 aa10.5□□□□□ -0.73
C9orf3-217ENST00000479161 OR10J3Q5JRS4 329 aa10.5□□□□□ -0.73
C9orf3-217ENST00000479161 DAZ4Q86SG3 579 aaKnown RBP10.5□□□□□ -0.73
C9orf3-217ENST00000479161 NEXN-AS1Q8NBZ9 246 aa10.5□□□□□ -0.73
C9orf3-217ENST00000479161 DAZ3Q9NR90 486 aaKnown RBP10.5□□□□□ -0.73
C9orf3-217ENST00000479161 V9GYV3 84 aa10.5□□□□□ -0.73
C9orf3-217ENST00000479161 TWIST1Q15672 202 aa10.49□□□□□ -0.73
C9orf3-217ENST00000479161 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
C9orf3-217ENST00000479161 PKD1P98161 4303 aa10.49□□□□□ -0.73
C9orf3-217ENST00000479161 SSTP61278 116 aa10.48□□□□□ -0.73
C9orf3-217ENST00000479161 LAGE3Q14657 143 aa10.48□□□□□ -0.73
C9orf3-217ENST00000479161 SMIM15Q7Z3B0 74 aa10.48□□□□□ -0.73
C9orf3-217ENST00000479161 BORCS7Q96B45 105 aa10.48□□□□□ -0.73
C9orf3-217ENST00000479161 SMCO4Q9NRQ5 59 aa10.48□□□□□ -0.73
C9orf3-217ENST00000479161 A0A1B0GUT8 65 aa10.47□□□□□ -0.73
C9orf3-217ENST00000479161 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
C9orf3-217ENST00000479161 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
C9orf3-217ENST00000479161 RASL11AQ6T310 242 aa10.47□□□□□ -0.73
C9orf3-217ENST00000479161 Q6ZRN7 208 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-217ENST00000479161 NIT2Q9NQR4 276 aa10.47□□□□□ -0.73
C9orf3-217ENST00000479161 TRBV6-8A0A0A6YYG3 113 aa10.46□□□□□ -0.73
C9orf3-217ENST00000479161 PNRC1Q12796 327 aaPredicted RBP10.46□□□□□ -0.73
C9orf3-217ENST00000479161 RHEBQ15382 184 aa10.46□□□□□ -0.73
C9orf3-217ENST00000479161 ADIRFQ15847 76 aa10.46□□□□□ -0.73
C9orf3-217ENST00000479161 SUMO4Q6EEV6 95 aa10.46□□□□□ -0.73
C9orf3-217ENST00000479161 HERC2O95714 4834 aa10.46□□□□□ -0.74
C9orf3-217ENST00000479161 PKHD1P08F94 4074 aa10.45□□□□□ -0.74
C9orf3-217ENST00000479161 PKIAP61925 76 aa10.45□□□□□ -0.74
C9orf3-217ENST00000479161 PGLYRP4Q96LB8 373 aa10.45□□□□□ -0.74
C9orf3-217ENST00000479161 TMEM191AQ9H0A3 160 aa10.45□□□□□ -0.74
C9orf3-217ENST00000479161 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
C9orf3-217ENST00000479161 TNFRSF18Q9Y5U5 241 aa10.45□□□□□ -0.74
C9orf3-217ENST00000479161 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
C9orf3-217ENST00000479161 MGPP08493 103 aa10.44□□□□□ -0.74
C9orf3-217ENST00000479161 TNP2Q05952 138 aa10.44□□□□□ -0.74
C9orf3-217ENST00000479161 NIT1Q86X76 327 aa10.44□□□□□ -0.74
C9orf3-217ENST00000479161 CBLN2Q8IUK8 224 aa10.44□□□□□ -0.74
C9orf3-217ENST00000479161 A0A1B0GW15 77 aa10.43□□□□□ -0.74
C9orf3-217ENST00000479161 RIGQ13278 110 aa10.43□□□□□ -0.74
C9orf3-217ENST00000479161 NUP35Q8NFH5 326 aa10.43□□□□□ -0.74
C9orf3-217ENST00000479161 PPP1R2P9O14990 202 aa10.42□□□□□ -0.74
C9orf3-217ENST00000479161 ELOBQ15370 118 aa10.42□□□□□ -0.74
C9orf3-217ENST00000479161 KCNIP4Q6PIL6 250 aa10.42□□□□□ -0.74
C9orf3-217ENST00000479161 GATD1Q8NB37 220 aa10.42□□□□□ -0.74
C9orf3-217ENST00000479161 DNAH11Q96DT5 4516 aa10.41□□□□□ -0.74
C9orf3-217ENST00000479161 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
C9orf3-217ENST00000479161 MT-ND4LP03901 98 aa10.41□□□□□ -0.74
C9orf3-217ENST00000479161 IQCJQ1A5X6 159 aa10.41□□□□□ -0.74
C9orf3-217ENST00000479161 URGCP-MRPS24S4R325 110 aa10.41□□□□□ -0.74
C9orf3-217ENST00000479161 TRBV6-5A0A0K0K1A5 114 aa10.4□□□□□ -0.74
C9orf3-217ENST00000479161 C7orf77A4D0Y5 90 aa10.4□□□□□ -0.74
C9orf3-217ENST00000479161 COLCA2A8K830 154 aa10.4□□□□□ -0.74
C9orf3-217ENST00000479161 RAB5BP61020 215 aa10.4□□□□□ -0.74
C9orf3-217ENST00000479161 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.74
C9orf3-217ENST00000479161 RPS10P5Q9NQ39 176 aa10.4□□□□□ -0.74
C9orf3-217ENST00000479161 TRBV25-1A0A075B6N4 114 aa10.39□□□□□ -0.75
C9orf3-217ENST00000479161 A0A087WX48 190 aa10.39□□□□□ -0.75
C9orf3-217ENST00000479161 ANAPC16Q96DE5 110 aa10.39□□□□□ -0.75
C9orf3-217ENST00000479161 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
C9orf3-217ENST00000479161 COX11Q9Y6N1 276 aa10.39□□□□□ -0.75
C9orf3-217ENST00000479161 IGHV1-24A0A0C4DH33 117 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 C1orf196B1AJZ1 125 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 NCR2O95944 276 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 PPP1R17O96001 155 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 IGHV3-33P01772 117 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 S100A8P05109 93 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 TM2D2Q9BX73 214 aa10.38□□□□□ -0.75
C9orf3-217ENST00000479161 RAB4AP20338 218 aa10.37□□□□□ -0.75
C9orf3-217ENST00000479161 RNF185Q96GF1 192 aa10.37□□□□□ -0.75
C9orf3-217ENST00000479161 DYNC1H1Q14204 4646 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms