RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 AP5S1Q9NUS5 200 aa20.54■□□□□ 0.88
VEGFA-211ENST00000476772 IGLV2-18A0A075B6J9 118 aa20.53■□□□□ 0.88
VEGFA-211ENST00000476772 DEFB130BP0DP73 79 aa20.53■□□□□ 0.88
VEGFA-211ENST00000476772 DEFB130AP0DP74 79 aa20.53■□□□□ 0.88
VEGFA-211ENST00000476772 NXT2Q9NPJ8 142 aaKnown RBP20.53■□□□□ 0.88
VEGFA-211ENST00000476772 H7C1H1 209 aa20.52■□□□□ 0.88
VEGFA-211ENST00000476772 AMTP48728 403 aa20.52■□□□□ 0.88
VEGFA-211ENST00000476772 Q8N8P6 123 aa20.52■□□□□ 0.88
VEGFA-211ENST00000476772 SMIM2Q9BVW6 85 aa20.52■□□□□ 0.88
VEGFA-211ENST00000476772 LYRM9A8MSI8 78 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 P0DMU3 169 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 FAM231AP0DMU4 169 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 FAM231CP0DMU5 169 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 PMCHL1Q16048 86 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 DEFB121Q5J5C9 76 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 ST20Q9HBF5 79 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 AKR1D1P51857 326 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 SBSPONQ8IVN8 264 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 NIT2Q9NQR4 276 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 DKK2Q9UBU2 259 aa20.51■□□□□ 0.87
VEGFA-211ENST00000476772 TRBV6-5A0A0K0K1A5 114 aa20.5■□□□□ 0.87
VEGFA-211ENST00000476772 IGHV1-24A0A0C4DH33 117 aa20.48■□□□□ 0.87
VEGFA-211ENST00000476772 PACRGQ96M98 296 aaPredicted RBP20.48■□□□□ 0.87
VEGFA-211ENST00000476772 DNHD1Q96M86 4753 aa20.48■□□□□ 0.87
VEGFA-211ENST00000476772 LINC01546A6NGU7 62 aa20.48■□□□□ 0.87
VEGFA-211ENST00000476772 C18orf15Q96N68 181 aa20.48■□□□□ 0.87
VEGFA-211ENST00000476772 TMEM70Q9BUB7 260 aa20.48■□□□□ 0.87
VEGFA-211ENST00000476772 Q9UF83 564 aa20.48■□□□□ 0.87
VEGFA-211ENST00000476772 CELA1Q9UNI1 258 aa20.48■□□□□ 0.87
VEGFA-211ENST00000476772 OR10D4PQ8NGN7 298 aa20.47■□□□□ 0.87
VEGFA-211ENST00000476772 SDHAF1A6NFY7 115 aa20.46■□□□□ 0.87
VEGFA-211ENST00000476772 POLR2KP53803 58 aaKnown RBP20.46■□□□□ 0.87
VEGFA-211ENST00000476772 NEGR1Q7Z3B1 354 aa20.46■□□□□ 0.87
VEGFA-211ENST00000476772 CIDEAO60543 219 aa20.45■□□□□ 0.86
VEGFA-211ENST00000476772 RPL32P62910 135 aaKnown RBP20.45■□□□□ 0.86
VEGFA-211ENST00000476772 TCAPO15273 167 aa20.45■□□□□ 0.86
VEGFA-211ENST00000476772 NEXN-AS1Q8NBZ9 246 aa20.44■□□□□ 0.86
VEGFA-211ENST00000476772 MRAPQ8TCY5 172 aa20.44■□□□□ 0.86
VEGFA-211ENST00000476772 A0A096LNJ9 63 aa20.42■□□□□ 0.86
VEGFA-211ENST00000476772 TRGV4A0A0C4DH28 118 aa20.42■□□□□ 0.86
VEGFA-211ENST00000476772 K7EQD1 137 aa20.42■□□□□ 0.86
VEGFA-211ENST00000476772 FHL2Q14192 279 aa20.42■□□□□ 0.86
VEGFA-211ENST00000476772 SLC25A29Q8N8R3 303 aa20.42■□□□□ 0.86
VEGFA-211ENST00000476772 SPART-AS1P0CW21 52 aa20.42■□□□□ 0.86
VEGFA-211ENST00000476772 TNFRSF18Q9Y5U5 241 aa20.42■□□□□ 0.86
VEGFA-211ENST00000476772 VCYO14598 125 aa20.41■□□□□ 0.86
VEGFA-211ENST00000476772 DAD1P61803 113 aa20.41■□□□□ 0.86
VEGFA-211ENST00000476772 TRBV27A0A0K0K1C4 114 aa20.4■□□□□ 0.86
VEGFA-211ENST00000476772 LAGE3Q14657 143 aa20.4■□□□□ 0.86
VEGFA-211ENST00000476772 SPATA25Q9BR10 227 aa20.4■□□□□ 0.86
VEGFA-211ENST00000476772 DEFB104AQ8WTQ1 72 aa20.39■□□□□ 0.86
VEGFA-211ENST00000476772 DNAJC30Q96LL9 226 aa20.39■□□□□ 0.86
VEGFA-211ENST00000476772 TM2D3Q9BRN9 247 aa20.39■□□□□ 0.86
VEGFA-211ENST00000476772 TRBV6-4A0A1B0GX49 114 aa20.37■□□□□ 0.85
VEGFA-211ENST00000476772 HBDP02042 147 aa20.37■□□□□ 0.85
VEGFA-211ENST00000476772 C11orf68Q9H3H3 251 aaKnown RBP20.37■□□□□ 0.85
VEGFA-211ENST00000476772 TRBV10-1A0A0K0K1A3 114 aa20.36■□□□□ 0.85
VEGFA-211ENST00000476772 K7EMI3 77 aa20.36■□□□□ 0.85
VEGFA-211ENST00000476772 FCER1GP30273 86 aa20.36■□□□□ 0.85
VEGFA-211ENST00000476772 KIR2DL4Q99706 377 aa20.36■□□□□ 0.85
VEGFA-211ENST00000476772 LEPROTL1O95214 131 aa20.35■□□□□ 0.85
VEGFA-211ENST00000476772 TEX48A0A1B0GUV7 120 aa20.35■□□□□ 0.85
VEGFA-211ENST00000476772 I3L3M4 83 aa20.35■□□□□ 0.85
VEGFA-211ENST00000476772 ORMDL2Q53FV1 153 aa20.35■□□□□ 0.85
VEGFA-211ENST00000476772 LINC00173Q6ZV60 143 aa20.35■□□□□ 0.85
VEGFA-211ENST00000476772 ZNRF2Q8NHG8 242 aa20.35■□□□□ 0.85
VEGFA-211ENST00000476772 NUDT3O95989 172 aa20.33■□□□□ 0.85
VEGFA-211ENST00000476772 RHOHQ15669 191 aa20.33■□□□□ 0.85
VEGFA-211ENST00000476772 TRBV7-3A0A075B6L6 115 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 A0A0J9YWU9 116 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 LOC100131303A0A0U1RQF7 123 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 BTF3P20290 206 aaKnown RBP20.32■□□□□ 0.84
VEGFA-211ENST00000476772 RPL36AP83881 106 aaKnown RBP20.32■□□□□ 0.84
VEGFA-211ENST00000476772 RPL36ALQ969Q0 106 aaKnown RBP20.32■□□□□ 0.84
VEGFA-211ENST00000476772 HHLA3Q9XRX5 114 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 GAGE12JA6NER3 117 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 TSHBP01222 138 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 GAGE1Q13065 139 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 GAGE4Q13068 117 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 GAGE5Q13069 117 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 GAGE13Q4V321 117 aa20.32■□□□□ 0.84
VEGFA-211ENST00000476772 PHLDA1Q8WV24 401 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-211ENST00000476772 IGHV3-38A0A0C4DH36 116 aa20.3■□□□□ 0.84
VEGFA-211ENST00000476772 ATP5G1P05496 136 aa20.3■□□□□ 0.84
VEGFA-211ENST00000476772 KRTDAPP60985 99 aa20.3■□□□□ 0.84
VEGFA-211ENST00000476772 PRADC1Q9BSG0 188 aa20.3■□□□□ 0.84
VEGFA-211ENST00000476772 C12orf74Q32Q52 190 aa20.29■□□□□ 0.84
VEGFA-211ENST00000476772 HSPB8Q9UJY1 196 aa20.29■□□□□ 0.84
VEGFA-211ENST00000476772 HUWE1Q7Z6Z7 4374 aaKnown RBP20.29■□□□□ 0.84
VEGFA-211ENST00000476772 C3orf79P0CE67 100 aa20.29■□□□□ 0.84
VEGFA-211ENST00000476772 CRYBA4P53673 196 aa20.29■□□□□ 0.84
VEGFA-211ENST00000476772 UBE2D3P61077 147 aa20.28■□□□□ 0.84
VEGFA-211ENST00000476772 UBE2D2P62837 147 aa20.28■□□□□ 0.84
VEGFA-211ENST00000476772 PYY3Q5JQD4 70 aa20.28■□□□□ 0.84
VEGFA-211ENST00000476772 PRO0255Q9UI72 69 aa20.28■□□□□ 0.84
VEGFA-211ENST00000476772 TENM3Q9P273 2699 aa20.28■□□□□ 0.84
VEGFA-211ENST00000476772 HTN3P15516 51 aa20.25■□□□□ 0.83
VEGFA-211ENST00000476772 C2orf66Q6UXQ4 117 aa20.25■□□□□ 0.83
VEGFA-211ENST00000476772 ZMAT4Q9H898 229 aa20.25■□□□□ 0.83
VEGFA-211ENST00000476772 F5H768 121 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms