RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ELANEP08246 267 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 LINC01620Q4KN68 170 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 C1orf229Q6ZS94 237 aaPredicted RBP9□□□□□ -0.97
U2AF1-209ENST00000475639 LENEPQ9Y5L5 61 aa9□□□□□ -0.97
U2AF1-209ENST00000475639 PDE6GP18545 87 aa8.99□□□□□ -0.97
U2AF1-209ENST00000475639 GNLYP22749 145 aa8.99□□□□□ -0.97
U2AF1-209ENST00000475639 ZNF134P52741 427 aa8.99□□□□□ -0.97
U2AF1-209ENST00000475639 DUX4L9Q6RFH8 374 aaPredicted RBP8.99□□□□□ -0.97
U2AF1-209ENST00000475639 C15orf65H3BRN8 121 aa8.99□□□□□ -0.97
U2AF1-209ENST00000475639 CCL18P55774 89 aa8.99□□□□□ -0.97
U2AF1-209ENST00000475639 XGP55808 180 aa8.99□□□□□ -0.97
U2AF1-209ENST00000475639 RPL18AQ02543 176 aaKnown RBP8.99□□□□□ -0.97
U2AF1-209ENST00000475639 MRPL23Q16540 153 aaKnown RBP8.99□□□□□ -0.97
U2AF1-209ENST00000475639 CASC2Q6XLA1 102 aa8.99□□□□□ -0.97
U2AF1-209ENST00000475639 PCSK5Q92824 1860 aa8.99□□□□□ -0.97
U2AF1-209ENST00000475639 A0A0J9YY99 117 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 UBE2AP49459 152 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 PATE2Q6UY27 113 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 Q71RC1 249 aaPredicted RBP8.98□□□□□ -0.97
U2AF1-209ENST00000475639 FN1P02751 2386 aaKnown RBP8.98□□□□□ -0.97
U2AF1-209ENST00000475639 A4D1N5 150 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 COX7A2LO14548 114 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 FSTL3O95633 263 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 FOXI1Q12951 378 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 TM2D2Q9BX73 214 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 MRPL36Q9P0J6 103 aaKnown RBP8.98□□□□□ -0.97
U2AF1-209ENST00000475639 U3KQE9 123 aa8.98□□□□□ -0.97
U2AF1-209ENST00000475639 TEX36Q5VZQ5 186 aa8.97□□□□□ -0.97
U2AF1-209ENST00000475639 Q6ZUT4 128 aa8.97□□□□□ -0.97
U2AF1-209ENST00000475639 A0A0G2JNJ9 132 aa8.97□□□□□ -0.97
U2AF1-209ENST00000475639 H3BRN7 92 aa8.97□□□□□ -0.97
U2AF1-209ENST00000475639 Q9UFV3 132 aa8.97□□□□□ -0.97
U2AF1-209ENST00000475639 DSCAML1Q8TD84 2053 aa8.97□□□□□ -0.97
U2AF1-209ENST00000475639 IGHV7-4-1A0A0J9YVY3 117 aa8.96□□□□□ -0.97
U2AF1-209ENST00000475639 CUL9Q8IWT3 2517 aa8.96□□□□□ -0.97
U2AF1-209ENST00000475639 AGRNO00468 2067 aa8.96□□□□□ -0.97
U2AF1-209ENST00000475639 EPOPA6NHQ4 379 aa8.96□□□□□ -0.97
U2AF1-209ENST00000475639 IGKV4-1P06312 121 aa8.96□□□□□ -0.97
U2AF1-209ENST00000475639 Q6ZQT7 251 aa8.96□□□□□ -0.97
U2AF1-209ENST00000475639 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.97
U2AF1-209ENST00000475639 RUSC1-AS1Q66K80 236 aa8.96□□□□□ -0.98
U2AF1-209ENST00000475639 H0Y9J4 135 aa8.96□□□□□ -0.98
U2AF1-209ENST00000475639 H3BT86 120 aa8.96□□□□□ -0.98
U2AF1-209ENST00000475639 CRYGBP07316 175 aa8.96□□□□□ -0.98
U2AF1-209ENST00000475639 NFE4Q86UQ8 179 aa8.96□□□□□ -0.98
U2AF1-209ENST00000475639 MUC4Q99102 2169 aa8.96□□□□□ -0.98
U2AF1-209ENST00000475639 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.95□□□□□ -0.98
U2AF1-209ENST00000475639 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
U2AF1-209ENST00000475639 Q6ZS92 163 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 USP17L23D6RBM5 183 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 E7EQL1 145 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 TRBV12-3P01733 135 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 ATP6V0E2Q8NHE4 81 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 A0A0J9YXV3 536 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 LECT2O14960 151 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 FAM240AA0A1B0GVK7 77 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 WI2-2373I1.2A0A1W2PRP0 233 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 NDUFA1O15239 70 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 FAM110AQ9BQ89 295 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 HHLA3Q9XRX5 114 aa8.95□□□□□ -0.98
U2AF1-209ENST00000475639 PLXNB1O43157 2135 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 ATP5G1P05496 136 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 C3orf22Q8N5N4 141 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 ICOSQ9Y6W8 199 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 BRI3O95415 125 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 PIFOQ8TCI5 191 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 WT1-ASQ06250 92 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 C9orf47Q6ZRZ4 202 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 LINC00311Q8N616 119 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 AGPAT4-IT1Q9H0P7 198 aa8.94□□□□□ -0.98
U2AF1-209ENST00000475639 J3QLI3 93 aa8.93□□□□□ -0.98
U2AF1-209ENST00000475639 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
U2AF1-209ENST00000475639 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
U2AF1-209ENST00000475639 C11orf53Q8IXP5 236 aa8.93□□□□□ -0.98
U2AF1-209ENST00000475639 IGLV10-54A0A075B6I4 117 aa8.93□□□□□ -0.98
U2AF1-209ENST00000475639 IGLV2-23P01705 113 aa8.93□□□□□ -0.98
U2AF1-209ENST00000475639 SEM1Q6ZVN7 128 aa8.93□□□□□ -0.98
U2AF1-209ENST00000475639 DIRC1Q969H9 104 aa8.93□□□□□ -0.98
U2AF1-209ENST00000475639 TLN2Q9Y4G6 2542 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 LINC00643Q86TS7 51 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 TMEM105Q8N8V8 129 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 RITA1Q96K30 269 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 BPY2O14599 106 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 CD59P13987 128 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 FANCD2OSQ96PS1 177 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 ZNRD1Q9P1U0 126 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 ZNF491Q8N8L2 437 aa8.92□□□□□ -0.98
U2AF1-209ENST00000475639 ANKHD1Q8IWZ3 2542 aaKnown RBP8.91□□□□□ -0.98
U2AF1-209ENST00000475639 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 GNRH2O43555 120 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 NHLRC4P0CG21 123 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-209ENST00000475639 GYPEP15421 78 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 CXCL5P42830 114 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 C17orf77Q96MU5 243 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 IGKV1D-37A0A075B6S9 117 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 CFAP126Q5VTH2 177 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 H3BUA1 57 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 ZNF833PQ6ZTB9 187 aa8.91□□□□□ -0.98
U2AF1-209ENST00000475639 RNF152Q8N8N0 203 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms