RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CIDEAO60543 219 aa9.82□□□□□ -0.84
TRAF4-210ENST00000475329 IGHV3-53P01767 116 aa9.82□□□□□ -0.84
TRAF4-210ENST00000475329 HBDP02042 147 aa9.82□□□□□ -0.84
TRAF4-210ENST00000475329 CMYA5Q8N3K9 4069 aa9.82□□□□□ -0.84
TRAF4-210ENST00000475329 IGHV4-28A0A0C4DH34 117 aa9.81□□□□□ -0.84
TRAF4-210ENST00000475329 LEPROTL1O95214 131 aa9.81□□□□□ -0.84
TRAF4-210ENST00000475329 LAGE3Q14657 143 aa9.81□□□□□ -0.84
TRAF4-210ENST00000475329 ZNF479Q96JC4 524 aa9.81□□□□□ -0.84
TRAF4-210ENST00000475329 TMEM70Q9BUB7 260 aa9.81□□□□□ -0.84
TRAF4-210ENST00000475329 HSPB8Q9UJY1 196 aa9.81□□□□□ -0.84
TRAF4-210ENST00000475329 TP53TG1Q9Y2A0 90 aa9.81□□□□□ -0.84
TRAF4-210ENST00000475329 A0A096LNJ9 63 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 SDHAF1A6NFY7 115 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 LYRM9A8MSI8 78 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 VCYO14598 125 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 FCER1GP30273 86 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 POLR2KP53803 58 aaKnown RBP9.8□□□□□ -0.84
TRAF4-210ENST00000475329 KRTDAPP60985 99 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 PYY3Q5JQD4 70 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 KPRPQ5T749 579 aaPredicted RBP9.8□□□□□ -0.84
TRAF4-210ENST00000475329 Q6ZSN1 163 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 LINC00612Q8N6U2 182 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 Q8NAQ8 132 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 ANK2Q01484 3957 aa9.8□□□□□ -0.84
TRAF4-210ENST00000475329 TCAPO15273 167 aa9.79□□□□□ -0.84
TRAF4-210ENST00000475329 JOSD1Q15040 202 aaPredicted RBP9.79□□□□□ -0.84
TRAF4-210ENST00000475329 ORMDL2Q53FV1 153 aa9.79□□□□□ -0.84
TRAF4-210ENST00000475329 LINC00518Q8N0U6 118 aa9.79□□□□□ -0.84
TRAF4-210ENST00000475329 DNAJC30Q96LL9 226 aa9.79□□□□□ -0.84
TRAF4-210ENST00000475329 PKD1L1Q8TDX9 2849 aa9.79□□□□□ -0.84
TRAF4-210ENST00000475329 TRBV27A0A0K0K1C4 114 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 K7EQD1 137 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 C3orf79P0CE67 100 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 P0DMU3 169 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 FAM231AP0DMU4 169 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 FAM231CP0DMU5 169 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 FAM222AQ5U5X8 452 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 NEGR1Q7Z3B1 354 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 NEXN-AS1Q8NBZ9 246 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 C18orf15Q96N68 181 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 C12orf57Q99622 126 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 TNFRSF18Q9Y5U5 241 aa9.78□□□□□ -0.84
TRAF4-210ENST00000475329 NUDT3O95989 172 aa9.77□□□□□ -0.85
TRAF4-210ENST00000475329 DEFB130BP0DP73 79 aa9.77□□□□□ -0.85
TRAF4-210ENST00000475329 DEFB130AP0DP74 79 aa9.77□□□□□ -0.85
TRAF4-210ENST00000475329 BTF3P20290 206 aaKnown RBP9.77□□□□□ -0.85
TRAF4-210ENST00000475329 LINC00173Q6ZV60 143 aa9.77□□□□□ -0.85
TRAF4-210ENST00000475329 TRGV4A0A0C4DH28 118 aa9.76□□□□□ -0.85
TRAF4-210ENST00000475329 TRBV10-1A0A0K0K1A3 114 aa9.76□□□□□ -0.85
TRAF4-210ENST00000475329 I3L3M4 83 aa9.76□□□□□ -0.85
TRAF4-210ENST00000475329 DEFB4AO15263 64 aa9.76□□□□□ -0.85
TRAF4-210ENST00000475329 SCGB1D1O95968 90 aa9.76□□□□□ -0.85
TRAF4-210ENST00000475329 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
TRAF4-210ENST00000475329 DKK2Q9UBU2 259 aa9.76□□□□□ -0.85
TRAF4-210ENST00000475329 PRB2P02812 416 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-210ENST00000475329 G0S2P27469 103 aa9.75□□□□□ -0.85
TRAF4-210ENST00000475329 RHOHQ15669 191 aa9.75□□□□□ -0.85
TRAF4-210ENST00000475329 RETNQ9HD89 108 aa9.75□□□□□ -0.85
TRAF4-210ENST00000475329 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
TRAF4-210ENST00000475329 TRBV6-4A0A1B0GX49 114 aa9.74□□□□□ -0.85
TRAF4-210ENST00000475329 K7EIL1 84 aa9.74□□□□□ -0.85
TRAF4-210ENST00000475329 TSHBP01222 138 aa9.74□□□□□ -0.85
TRAF4-210ENST00000475329 DAD1P61803 113 aa9.74□□□□□ -0.85
TRAF4-210ENST00000475329 RPL36AP83881 106 aaKnown RBP9.74□□□□□ -0.85
TRAF4-210ENST00000475329 SLC25A29Q8N8R3 303 aa9.74□□□□□ -0.85
TRAF4-210ENST00000475329 RPL36ALQ969Q0 106 aaKnown RBP9.74□□□□□ -0.85
TRAF4-210ENST00000475329 DNAH3Q8TD57 4116 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 LINC01549A6NIU2 74 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 SYS1-DBNDD2H3BUS1 97 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 ATP5LO75964 103 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 SPART-AS1P0CW21 52 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 FHL2Q14192 279 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 TOMM6Q96B49 74 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 IFI27L1Q96BM0 104 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 Q9UF83 564 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 CELA1Q9UNI1 258 aa9.73□□□□□ -0.85
TRAF4-210ENST00000475329 TRBV7-3A0A075B6L6 115 aa9.72□□□□□ -0.85
TRAF4-210ENST00000475329 C20orf202A1L168 122 aa9.72□□□□□ -0.85
TRAF4-210ENST00000475329 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
TRAF4-210ENST00000475329 C2orf66Q6UXQ4 117 aa9.72□□□□□ -0.85
TRAF4-210ENST00000475329 Q8N976 141 aa9.72□□□□□ -0.85
TRAF4-210ENST00000475329 ZNRF2Q8NHG8 242 aa9.72□□□□□ -0.85
TRAF4-210ENST00000475329 PRADC1Q9BSG0 188 aa9.72□□□□□ -0.85
TRAF4-210ENST00000475329 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
TRAF4-210ENST00000475329 CDPF1Q6NVV7 123 aa9.71□□□□□ -0.86
TRAF4-210ENST00000475329 DEFB104AQ8WTQ1 72 aa9.71□□□□□ -0.86
TRAF4-210ENST00000475329 C11orf68Q9H3H3 251 aaKnown RBP9.71□□□□□ -0.86
TRAF4-210ENST00000475329 GAGE12JA6NER3 117 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 H0Y8G0 127 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 UBE2D3P61077 147 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 UBE2D2P62837 147 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 GAGE1Q13065 139 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 GAGE4Q13068 117 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 GAGE5Q13069 117 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 COTL1Q14019 142 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 GAGE13Q4V321 117 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 SPATA12Q7Z6I5 190 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 PHLDA1Q8WV24 401 aaPredicted RBP9.7□□□□□ -0.86
TRAF4-210ENST00000475329 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms