RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CLRN3Q8NCR9 226 aa13.75□□□□□ -0.21
SF1-213ENST00000472725 Q9UF83 564 aa13.75□□□□□ -0.21
SF1-213ENST00000472725 TRAV9-1A0A075B6T8 112 aa13.74□□□□□ -0.21
SF1-213ENST00000472725 HBBP68871 147 aa13.74□□□□□ -0.21
SF1-213ENST00000472725 KCNIP4Q6PIL6 250 aa13.74□□□□□ -0.21
SF1-213ENST00000472725 GATD1Q8NB37 220 aa13.74□□□□□ -0.21
SF1-213ENST00000472725 BTF3L4Q96K17 158 aa13.74□□□□□ -0.21
SF1-213ENST00000472725 NIT2Q9NQR4 276 aa13.74□□□□□ -0.21
SF1-213ENST00000472725 TNFRSF18Q9Y5U5 241 aa13.74□□□□□ -0.21
SF1-213ENST00000472725 A0A1B0GXF2 115 aa13.73□□□□□ -0.21
SF1-213ENST00000472725 C7orf77A4D0Y5 90 aa13.73□□□□□ -0.21
SF1-213ENST00000472725 SNAPINO95295 136 aa13.73□□□□□ -0.21
SF1-213ENST00000472725 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
SF1-213ENST00000472725 LELP1Q5T871 98 aa13.73□□□□□ -0.21
SF1-213ENST00000472725 DAZ4Q86SG3 579 aaKnown RBP13.73□□□□□ -0.21
SF1-213ENST00000472725 MRAP2Q96G30 205 aa13.73□□□□□ -0.21
SF1-213ENST00000472725 Q9H8V8 135 aa13.73□□□□□ -0.21
SF1-213ENST00000472725 DAZ3Q9NR90 486 aaKnown RBP13.73□□□□□ -0.21
SF1-213ENST00000472725 ALMS1Q8TCU4 4167 aa13.72□□□□□ -0.21
SF1-213ENST00000472725 LYSTQ99698 3801 aa13.72□□□□□ -0.21
SF1-213ENST00000472725 APOC3P02656 99 aa13.72□□□□□ -0.21
SF1-213ENST00000472725 TRAV8-6A0A0B4J262 113 aa13.71□□□□□ -0.21
SF1-213ENST00000472725 K7EP13 123 aa13.71□□□□□ -0.21
SF1-213ENST00000472725 RAB4AP20338 218 aa13.71□□□□□ -0.21
SF1-213ENST00000472725 CAMPP49913 170 aa13.71□□□□□ -0.21
SF1-213ENST00000472725 MRPL54Q6P161 138 aaKnown RBP13.71□□□□□ -0.21
SF1-213ENST00000472725 SIVA1O15304 175 aa13.7□□□□□ -0.22
SF1-213ENST00000472725 PPP1R17O96001 155 aa13.7□□□□□ -0.22
SF1-213ENST00000472725 S100PP25815 95 aa13.7□□□□□ -0.22
SF1-213ENST00000472725 FAM104BQ5XKR9 115 aa13.7□□□□□ -0.22
SF1-213ENST00000472725 RNF185Q96GF1 192 aa13.7□□□□□ -0.22
SF1-213ENST00000472725 TTC32Q5I0X7 151 aa13.69□□□□□ -0.22
SF1-213ENST00000472725 AMN1Q8IY45 258 aa13.69□□□□□ -0.22
SF1-213ENST00000472725 RPS10P5Q9NQ39 176 aa13.69□□□□□ -0.22
SF1-213ENST00000472725 TRBV6-5A0A0K0K1A5 114 aa13.68□□□□□ -0.22
SF1-213ENST00000472725 OR10J3Q5JRS4 329 aa13.67□□□□□ -0.22
SF1-213ENST00000472725 SLC7A5P1Q8MH63 180 aa13.67□□□□□ -0.22
SF1-213ENST00000472725 TRAV26-2A0A0B4J265 109 aa13.66□□□□□ -0.22
SF1-213ENST00000472725 NBDYA0A0U1RRE5 68 aa13.66□□□□□ -0.22
SF1-213ENST00000472725 DNAH10OSP0CZ25 163 aa13.66□□□□□ -0.22
SF1-213ENST00000472725 BTF3P20290 206 aaKnown RBP13.66□□□□□ -0.22
SF1-213ENST00000472725 Q6ZR54 194 aa13.66□□□□□ -0.22
SF1-213ENST00000472725 KMT2CQ8NEZ4 4911 aaKnown RBP13.66□□□□□ -0.22
SF1-213ENST00000472725 TRAV9-2A0A087WT02 112 aa13.65□□□□□ -0.22
SF1-213ENST00000472725 TRBV6-8A0A0A6YYG3 113 aa13.65□□□□□ -0.22
SF1-213ENST00000472725 IGHV3-38A0A0C4DH36 116 aa13.65□□□□□ -0.22
SF1-213ENST00000472725 PPBPP02775 128 aa13.65□□□□□ -0.22
SF1-213ENST00000472725 MRPL51Q4U2R6 128 aaKnown RBP13.65□□□□□ -0.22
SF1-213ENST00000472725 DNAH1Q9P2D7 4330 aa13.65□□□□□ -0.22
SF1-213ENST00000472725 IGLV2-18A0A075B6J9 118 aa13.64□□□□□ -0.23
SF1-213ENST00000472725 LINC01556Q5JQF7 62 aa13.64□□□□□ -0.23
SF1-213ENST00000472725 WFDC10BQ8IUB3 73 aa13.64□□□□□ -0.23
SF1-213ENST00000472725 PKIAP61925 76 aa13.63□□□□□ -0.23
SF1-213ENST00000472725 COX19Q49B96 90 aa13.63□□□□□ -0.23
SF1-213ENST00000472725 RPL39LQ96EH5 51 aaKnown RBP13.63□□□□□ -0.23
SF1-213ENST00000472725 ST20Q9HBF5 79 aa13.63□□□□□ -0.23
SF1-213ENST00000472725 C10orf126Q8N4M7 172 aa13.62□□□□□ -0.23
SF1-213ENST00000472725 CHCHD7Q9BUK0 85 aa13.62□□□□□ -0.23
SF1-213ENST00000472725 VPS13DQ5THJ4 4388 aa13.62□□□□□ -0.23
SF1-213ENST00000472725 TRBV24-1A0A075B6N3 115 aa13.61□□□□□ -0.23
SF1-213ENST00000472725 TRBV25-1A0A075B6N4 114 aa13.61□□□□□ -0.23
SF1-213ENST00000472725 SDHAF1A6NFY7 115 aa13.61□□□□□ -0.23
SF1-213ENST00000472725 PHOX2AO14813 284 aa13.61□□□□□ -0.23
SF1-213ENST00000472725 NCR2O95944 276 aa13.61□□□□□ -0.23
SF1-213ENST00000472725 CKS2P33552 79 aa13.61□□□□□ -0.23
SF1-213ENST00000472725 IQCJQ1A5X6 159 aa13.61□□□□□ -0.23
SF1-213ENST00000472725 COTL1Q14019 142 aa13.6□□□□□ -0.23
SF1-213ENST00000472725 NRACQ8N912 160 aa13.6□□□□□ -0.23
SF1-213ENST00000472725 C20orf78Q9BR46 151 aa13.6□□□□□ -0.23
SF1-213ENST00000472725 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
SF1-213ENST00000472725 IGHV1-24A0A0C4DH33 117 aa13.59□□□□□ -0.23
SF1-213ENST00000472725 I3L3M4 83 aa13.59□□□□□ -0.23
SF1-213ENST00000472725 M0R2N4 97 aa13.59□□□□□ -0.23
SF1-213ENST00000472725 RPS10P46783 165 aaKnown RBP13.59□□□□□ -0.23
SF1-213ENST00000472725 POLR2KP53803 58 aaKnown RBP13.59□□□□□ -0.23
SF1-213ENST00000472725 NTM-AS1Q6ZSK4 140 aa13.59□□□□□ -0.23
SF1-213ENST00000472725 ORMDL3Q8N138 153 aa13.59□□□□□ -0.23
SF1-213ENST00000472725 TMEM70Q9BUB7 260 aa13.59□□□□□ -0.23
SF1-213ENST00000472725 LAMTOR2Q9Y2Q5 125 aa13.59□□□□□ -0.23
SF1-213ENST00000472725 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
SF1-213ENST00000472725 TRBV27A0A0K0K1C4 114 aa13.58□□□□□ -0.24
SF1-213ENST00000472725 GAS8-AS1O95177 125 aa13.58□□□□□ -0.24
SF1-213ENST00000472725 HLA-DQA1P01909 254 aa13.58□□□□□ -0.24
SF1-213ENST00000472725 SUMO2P61956 95 aaKnown RBP13.58□□□□□ -0.24
SF1-213ENST00000472725 RPL32P62910 135 aaKnown RBP13.58□□□□□ -0.24
SF1-213ENST00000472725 NIT1Q86X76 327 aa13.58□□□□□ -0.24
SF1-213ENST00000472725 GNB1LQ9BYB4 327 aa13.58□□□□□ -0.24
SF1-213ENST00000472725 D6R8Y8 96 aa13.57□□□□□ -0.24
SF1-213ENST00000472725 VCYO14598 125 aa13.57□□□□□ -0.24
SF1-213ENST00000472725 TMEM136Q6ZRR5 245 aa13.57□□□□□ -0.24
SF1-213ENST00000472725 SMKR1H3BMG3 65 aa13.56□□□□□ -0.24
SF1-213ENST00000472725 MT-ND6P03923 174 aa13.56□□□□□ -0.24
SF1-213ENST00000472725 PMCHP20382 165 aa13.56□□□□□ -0.24
SF1-213ENST00000472725 C1orf134Q5TEV5 83 aa13.56□□□□□ -0.24
SF1-213ENST00000472725 A0A087WX48 190 aa13.55□□□□□ -0.24
SF1-213ENST00000472725 TCAPO15273 167 aa13.55□□□□□ -0.24
SF1-213ENST00000472725 TNFRSF6BO95407 300 aa13.55□□□□□ -0.24
SF1-213ENST00000472725 ELOBQ15370 118 aa13.55□□□□□ -0.24
SF1-213ENST00000472725 CHCHD5Q9BSY4 110 aa13.55□□□□□ -0.24
SF1-213ENST00000472725 TMEM243Q9BU79 118 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms