RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 M0R036 132 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 M0R2P5 195 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 ZNF253O75346 499 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 SFT2D2O95562 160 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 TSHBP01222 138 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 METTL15P1P0C7V9 234 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 IAPPP10997 89 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 AMTP48728 403 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 SULT1A1P50225 295 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 VAMP2P63027 116 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 MPV17L2Q567V2 206 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 SAPCD1Q5SSQ6 148 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 HIST3H2BBQ8N257 126 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 OR10D4PQ8NGN7 298 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 TRGV9Q99603 122 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 CYTL1Q9NRR1 136 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 PRR13Q9NZ81 148 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 GSKIPQ9P0R6 139 aa3.7□□□□□ -1.82
HDAC3-206ENST00000471968 STRAPQ9Y3F4 350 aaKnown RBP3.7□□□□□ -1.82
HDAC3-206ENST00000471968 A0A0G2JRQ6 117 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 SLC17A3O00476 420 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 DLEU1O43261 78 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 PPP1R1AQ13522 171 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 JOSD1Q15040 202 aaPredicted RBP3.69□□□□□ -1.82
HDAC3-206ENST00000471968 SPANXN5Q5MJ07 72 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 GGNBP1Q5YKI7 109 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 LCN15Q6UWW0 184 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 PHF5AQ7RTV0 110 aaKnown RBP3.69□□□□□ -1.82
HDAC3-206ENST00000471968 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 FAM19A4Q96LR4 140 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 OPRPNQ99935 248 aaPredicted RBP3.69□□□□□ -1.82
HDAC3-206ENST00000471968 SHANK2-AS3Q9BTD1 123 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 ACTR3CQ9C0K3 210 aaPredicted RBP3.69□□□□□ -1.82
HDAC3-206ENST00000471968 RBKSQ9H477 322 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 HSPB7Q9UBY9 170 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 RNF24Q9Y225 148 aa3.69□□□□□ -1.82
HDAC3-206ENST00000471968 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 A0A087WZ39 114 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 A0A1W2PNN7 141 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 UMAD1C9J7I0 102 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 H3BP45 60 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 M0R143 59 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 SYNGR2O43760 224 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 SSSCA1O60232 199 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 GCGP01275 180 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 MGST1P10620 155 aaKnown RBP3.68□□□□□ -1.82
HDAC3-206ENST00000471968 SLC25A6P12236 298 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 NDUFA6P56556 154 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 S100A10P60903 97 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 C21orf62-AS1Q17RA5 79 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 IAH1Q2TAA2 248 aaPredicted RBP3.68□□□□□ -1.82
HDAC3-206ENST00000471968 LRRC37A5PQ49AS3 106 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 HIGD2BQ4VC39 106 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 KHDC3LQ587J8 217 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 NMSQ5H8A3 153 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 AKR1C8PQ5T2L2 129 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 CFAP126Q5VTH2 177 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 Q6ZRG5 221 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 LINC00304Q8N9R0 145 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 ISOC2Q96AB3 205 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 PACRGQ96M98 296 aaPredicted RBP3.68□□□□□ -1.82
HDAC3-206ENST00000471968 PSENENQ9NZ42 101 aa3.68□□□□□ -1.82
HDAC3-206ENST00000471968 TRGV11A0A075B6L2 103 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 FAM24AA6NFZ4 105 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 B4DEV8 164 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 C9JQL5 133 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BKO60814 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BJP06899 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 CRISP2P16562 243 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BOP23527 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BBP33778 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BDP58876 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BCP62807 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST2H2BEQ16778 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 ZNF674Q2M3X9 581 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 AARDQ4LEZ3 155 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.67□□□□□ -1.82
HDAC3-206ENST00000471968 TMEM182Q6ZP80 229 aaPredicted RBP3.67□□□□□ -1.82
HDAC3-206ENST00000471968 LINC00269Q8N2A0 174 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 ZFAND2AQ8N6M9 145 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BHQ93079 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 MRPL53Q96EL3 112 aaKnown RBP3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BNQ99877 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BMQ99879 126 aa3.67□□□□□ -1.82
HDAC3-206ENST00000471968 LSM5Q9Y4Y9 91 aaKnown RBP3.67□□□□□ -1.82
HDAC3-206ENST00000471968 BORCS7-ASMTA0A0B4J1R7 106 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 K7EPK0 472 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 CIDEAO60543 219 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 FABP4P15090 132 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 ZNF25P17030 456 aaPredicted RBP3.66□□□□□ -1.82
HDAC3-206ENST00000471968 AKR1C3P42330 323 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 SELENOTP62341 195 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 IQCJQ1A5X6 159 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 COA6Q5JTJ3 125 aaKnown RBP3.66□□□□□ -1.82
HDAC3-206ENST00000471968 C15orf56Q8N910 161 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 TSKUQ8WUA8 353 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 HIST1H2BLQ99880 126 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
HDAC3-206ENST00000471968 AGPAT4-IT1Q9H0P7 198 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms