RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 C9orf139Q6ZV77 190 aa8.16□□□□□ -1.1
CHD3-208ENST00000470531 DLX4Q92988 240 aaPredicted RBP8.16□□□□□ -1.1
CHD3-208ENST00000470531 MDFICQ9P1T7 246 aa8.16□□□□□ -1.1
CHD3-208ENST00000470531 DEFB131AP59861 70 aa8.16□□□□□ -1.1
CHD3-208ENST00000470531 GATD1Q8NB37 220 aa8.16□□□□□ -1.1
CHD3-208ENST00000470531 TRBV7-1A0A0A6YYK4 115 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 A0A1W2PPR1 153 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 C11orf86A6NJI1 115 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 RPL13AP40429 203 aaKnown RBP8.15□□□□□ -1.1
CHD3-208ENST00000470531 MINOS1Q5TGZ0 78 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 MINOS1-NBL1R4GNA1 71 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 INS-IGF2F8WCM5 200 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 AJUBAQ96IF1 538 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 XCL2Q9UBD3 114 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 USP24Q9UPU5 2620 aa8.15□□□□□ -1.1
CHD3-208ENST00000470531 IGHV4-59P01825 116 aa8.15□□□□□ -1.11
CHD3-208ENST00000470531 TRAV8-3A0A0A6YYJ7 113 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 J3KT08 172 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 TRPT1Q86TN4 253 aaKnown RBP8.14□□□□□ -1.11
CHD3-208ENST00000470531 A8MZ25 164 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 TM2D2Q9BX73 214 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 NBEAL2Q6ZNJ1 2754 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 OVOL1O14753 267 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 IGLC6P0CF74 106 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
CHD3-208ENST00000470531 DAZ1Q9NQZ3 744 aaKnown RBP8.14□□□□□ -1.11
CHD3-208ENST00000470531 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.13□□□□□ -1.11
CHD3-208ENST00000470531 IGKV2-29A2NJV5 120 aaPredicted RBP8.13□□□□□ -1.11
CHD3-208ENST00000470531 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
CHD3-208ENST00000470531 C19orf84I3L1E1 186 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 HHLA3Q9XRX5 114 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 C8orf31Q8N9H6 132 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 C15orf53Q8NAA6 179 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 NPBQ8NG41 125 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 MUC4Q99102 2169 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 FLNBO75369 2602 aaKnown RBP8.13□□□□□ -1.11
CHD3-208ENST00000470531 VCYO14598 125 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 ZNF493Q6ZR52 646 aa8.13□□□□□ -1.11
CHD3-208ENST00000470531 TRAV8-4A0A0B4J246 113 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 PPP1R17O96001 155 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 PROK1P58294 105 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 APRG1Q8IVJ8 170 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 SUMO4Q6EEV6 95 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 RASL10AQ92737 203 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 IGHV4-30-2A0A087WSY4 118 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 IGHV1-69DA0A0B4J2H0 117 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 LY6LH3BQJ8 138 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 IGHV1-69P01742 117 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 LGALS1P09382 135 aaKnown RBP8.12□□□□□ -1.11
CHD3-208ENST00000470531 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
CHD3-208ENST00000470531 CHCHD5Q9BSY4 110 aa8.12□□□□□ -1.11
CHD3-208ENST00000470531 HECTD1Q9ULT8 2610 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 J3QQQ9 107 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 UTP20O75691 2785 aaKnown RBP8.11□□□□□ -1.11
CHD3-208ENST00000470531 COX6CP09669 75 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 PMVKQ15126 192 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 NTN5Q8WTR8 489 aaPredicted RBP8.11□□□□□ -1.11
CHD3-208ENST00000470531 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 PRB1P04280 392 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 HRCT1Q6UXD1 115 aa8.11□□□□□ -1.11
CHD3-208ENST00000470531 TRGV1A0A0A0MS02 117 aa8.1□□□□□ -1.11
CHD3-208ENST00000470531 TRAV4A0A0B4J268 109 aa8.1□□□□□ -1.11
CHD3-208ENST00000470531 MRPS12O15235 138 aaKnown RBP8.1□□□□□ -1.11
CHD3-208ENST00000470531 ZNF415Q09FC8 603 aa8.1□□□□□ -1.11
CHD3-208ENST00000470531 Q8N1Y9 231 aa8.1□□□□□ -1.11
CHD3-208ENST00000470531 C5orf56Q8N8D9 126 aa8.1□□□□□ -1.11
CHD3-208ENST00000470531 ZNF580Q9UK33 172 aa8.1□□□□□ -1.11
CHD3-208ENST00000470531 IGHG4P01861 327 aa8.09□□□□□ -1.11
CHD3-208ENST00000470531 CDIP1Q9H305 208 aa8.09□□□□□ -1.11
CHD3-208ENST00000470531 ZFAND3Q9H8U3 227 aa8.09□□□□□ -1.11
CHD3-208ENST00000470531 U3KQK5 164 aa8.09□□□□□ -1.11
CHD3-208ENST00000470531 SPANXA1Q9NS26 97 aa8.09□□□□□ -1.11
CHD3-208ENST00000470531 COL27A1Q8IZC6 1860 aaPredicted RBP8.09□□□□□ -1.11
CHD3-208ENST00000470531 TNFRSF13BO14836 293 aaPredicted RBP8.09□□□□□ -1.11
CHD3-208ENST00000470531 RPL35AP18077 110 aaKnown RBP8.08□□□□□ -1.12
CHD3-208ENST00000470531 TIMM21Q9BVV7 248 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 F8P00451 2351 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 CLPSL1A2RUU4 121 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 E9PLD3 99 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 C2orf82Q6UX34 121 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 TRGV2A0A075B6R0 118 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 OOSP1A8MZH6 123 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 DEFB112Q30KQ8 113 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 MUSTN1Q8IVN3 82 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 DNAJC30Q96LL9 226 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 CFAP46Q8IYW2 2715 aa8.08□□□□□ -1.12
CHD3-208ENST00000470531 IGHV7-4-1A0A0J9YVY3 117 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 UCNP55089 124 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 PRO1854Q9UHT4 67 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 A0A096LPF7 62 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 SLURP1P55000 103 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 C19orf54Q5BKX5 351 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 Q6ZSV7 163 aa8.07□□□□□ -1.12
CHD3-208ENST00000470531 TEN1Q86WV5 123 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms