RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 CDK12Q9NYV4 1490 aaPredicted RBP1.61□□□□□ -2.15
TTC3-213ENST00000469939 MLH3Q9UHC1 1453 aa1.61□□□□□ -2.15
TTC3-213ENST00000469939 CROCC2H7BZ55 1655 aa1.61□□□□□ -2.15
TTC3-213ENST00000469939 CUL7Q14999 1698 aa1.61□□□□□ -2.15
TTC3-213ENST00000469939 QRICH2Q9H0J4 1663 aa1.61□□□□□ -2.15
TTC3-213ENST00000469939 CDC42BPAQ5VT25 1732 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 ANKRD26Q9UPS8 1709 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 SPTBP11277 2137 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 MUC22E2RYF6 1773 aaPredicted RBP1.6□□□□□ -2.15
TTC3-213ENST00000469939 PREX2Q70Z35 1606 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 ABCA5Q8WWZ7 1642 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 TRAV30A0A087WSZ9 112 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 MCRIP1C9JLW8 97 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 SNCGO76070 127 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 CCKP06307 115 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 PIPP12273 146 aaPredicted RBP1.6□□□□□ -2.15
TTC3-213ENST00000469939 AP4S1Q9Y587 144 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 CITO14578 2027 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 ZC3H13Q5T200 1668 aaKnown RBP1.6□□□□□ -2.15
TTC3-213ENST00000469939 RP1L1Q8IWN7 2480 aaPredicted RBP1.6□□□□□ -2.15
TTC3-213ENST00000469939 SYCP2Q9BX26 1530 aa1.6□□□□□ -2.15
TTC3-213ENST00000469939 ATP7BP35670 1465 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 LOC101927531A0A1B0GV80 90 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 TMEM218A2RU14 115 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 PRB1P04280 392 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 LYNX1P0DP58 116 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 GNG4P50150 75 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 UBE2G1P62253 170 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 Q56UQ5 140 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 COL5A1-AS1Q5SY13 56 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 Q6ZS92 163 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 IFI27L1Q96BM0 104 aa1.59□□□□□ -2.15
TTC3-213ENST00000469939 ZFYVE16Q7Z3T8 1539 aa1.59□□□□□ -2.16
TTC3-213ENST00000469939 DUOX2Q9NRD8 1548 aa1.59□□□□□ -2.16
TTC3-213ENST00000469939 HFM1A2PYH4 1435 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 CFAP43Q8NDM7 1665 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 ITSN2Q9NZM3 1697 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 MYH4Q9Y623 1939 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 MYOM2P54296 1465 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 NCOA2Q15596 1464 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 POLR1AO95602 1720 aaPredicted RBP1.58□□□□□ -2.16
TTC3-213ENST00000469939 PEAK1Q9H792 1746 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 A0A1B0GUL6 1792 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 LAMB1P07942 1786 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 ABCC3O15438 1527 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 MAGI3Q5TCQ9 1506 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 NBDYA0A0U1RRE5 68 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 HIGD1CA8MV81 97 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 DCDP81605 110 aaKnown RBP1.58□□□□□ -2.16
TTC3-213ENST00000469939 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
TTC3-213ENST00000469939 S100A7L2Q5SY68 101 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 DEFB132Q7Z7B7 95 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 NDUFA11Q86Y39 141 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 TSKUQ8WUA8 353 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 SPANXDQ9BXN6 97 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 DIP2AQ14689 1571 aa1.58□□□□□ -2.16
TTC3-213ENST00000469939 ANKRD50Q9ULJ7 1429 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 LRRIQ1Q96JM4 1722 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 PZPP20742 1482 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 IQSEC2Q5JU85 1478 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 DLEC1Q9Y238 1755 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 MAPKBP1O60336 1514 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 CEP170BQ9Y4F5 1589 aaPredicted RBP1.57□□□□□ -2.16
TTC3-213ENST00000469939 TPPP2P59282 170 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 PYY3Q5JQD4 70 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 SVBPQ8N300 66 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 SNHG12Q9BXW3 62 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 FBN1P35555 2871 aaKnown RBP1.57□□□□□ -2.16
TTC3-213ENST00000469939 ABCC5O15440 1437 aa1.57□□□□□ -2.16
TTC3-213ENST00000469939 IQGAP2Q13576 1575 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 TRAV12-3A0A0B4J271 114 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 TNFP01375 233 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 NPC2P61916 151 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 CATR1Q13166 79 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 FXYD3Q14802 87 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 RPL7L1Q6DKI1 246 aaKnown RBP1.56□□□□□ -2.16
TTC3-213ENST00000469939 Q8N8P6 123 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 C10orf82Q8WW14 230 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 AMELYQ99218 206 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 KNDC1Q76NI1 1749 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 MYO5CQ9NQX4 1742 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 BLMP54132 1417 aaPredicted RBP1.56□□□□□ -2.16
TTC3-213ENST00000469939 NKTRP30414 1462 aaKnown RBP1.56□□□□□ -2.16
TTC3-213ENST00000469939 URB2Q14146 1524 aaKnown RBP1.56□□□□□ -2.16
TTC3-213ENST00000469939 LRRC7Q96NW7 1537 aa1.56□□□□□ -2.16
TTC3-213ENST00000469939 ABCA8O94911 1581 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 TIAM1Q13009 1591 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 ESPL1Q14674 2120 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 ABCA6Q8N139 1617 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 MED12Q93074 2177 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 ZNF142P52746 1687 aaPredicted RBP1.55□□□□□ -2.16
TTC3-213ENST00000469939 COL6A6A6NMZ7 2263 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 A0A087WXM4 84 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 TCRBV3S1A0A5B6 114 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 APOC4-APOC2K7ER74 178 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 NCR3O14931 201 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 APOC2P02655 101 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 CBLN1P23435 193 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 NCMAPQ5T1S8 102 aa1.55□□□□□ -2.16
TTC3-213ENST00000469939 XAF1Q6GPH4 301 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms