RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 CTRLP40313 264 aa5.94□□□□□ -1.46
SSBP1-208ENST00000469123 JOSD1Q15040 202 aaPredicted RBP5.94□□□□□ -1.46
SSBP1-208ENST00000469123 TTC32Q5I0X7 151 aa5.94□□□□□ -1.46
SSBP1-208ENST00000469123 SLC25A29Q8N8R3 303 aa5.94□□□□□ -1.46
SSBP1-208ENST00000469123 OR10AG1Q8NH19 301 aa5.94□□□□□ -1.46
SSBP1-208ENST00000469123 GFRA4Q9GZZ7 299 aa5.94□□□□□ -1.46
SSBP1-208ENST00000469123 OSTCQ9NRP0 149 aa5.94□□□□□ -1.46
SSBP1-208ENST00000469123 TNFRSF18Q9Y5U5 241 aa5.94□□□□□ -1.46
SSBP1-208ENST00000469123 ALMS1Q8TCU4 4167 aa5.93□□□□□ -1.46
SSBP1-208ENST00000469123 A4D1N5 150 aa5.93□□□□□ -1.46
SSBP1-208ENST00000469123 CRYGDP07320 174 aa5.93□□□□□ -1.46
SSBP1-208ENST00000469123 FAM74A4Q5TZK3 123 aa5.93□□□□□ -1.46
SSBP1-208ENST00000469123 BORCS7Q96B45 105 aa5.93□□□□□ -1.46
SSBP1-208ENST00000469123 SNHG12Q9BXW3 62 aa5.93□□□□□ -1.46
SSBP1-208ENST00000469123 RNASE7Q9H1E1 156 aaKnown RBP5.93□□□□□ -1.46
SSBP1-208ENST00000469123 LINC00588Q9Y4M8 146 aa5.93□□□□□ -1.46
SSBP1-208ENST00000469123 PLECQ15149 4684 aaKnown RBP5.93□□□□□ -1.46
SSBP1-208ENST00000469123 H7C1H1 209 aa5.92□□□□□ -1.46
SSBP1-208ENST00000469123 FOXA3P55318 350 aaPredicted RBP5.92□□□□□ -1.46
SSBP1-208ENST00000469123 PNRC1Q12796 327 aaPredicted RBP5.92□□□□□ -1.46
SSBP1-208ENST00000469123 UBE2V1Q13404 147 aa5.92□□□□□ -1.46
SSBP1-208ENST00000469123 ESRGQ1W209 222 aa5.92□□□□□ -1.46
SSBP1-208ENST00000469123 COL5A1-AS1Q5SY13 56 aa5.92□□□□□ -1.46
SSBP1-208ENST00000469123 ZNRF2Q8NHG8 242 aa5.92□□□□□ -1.46
SSBP1-208ENST00000469123 TSKUQ8WUA8 353 aa5.92□□□□□ -1.46
SSBP1-208ENST00000469123 A0A087WWC5 75 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 A0A087WWL8 130 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 TGIF2-C20orf24A0A0A6YYL0 155 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 IGHV3-73A0A0B4J1V6 119 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 GZMBP10144 247 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 RPL23P62829 140 aaKnown RBP5.91□□□□□ -1.46
SSBP1-208ENST00000469123 RPL36AP83881 106 aaKnown RBP5.91□□□□□ -1.46
SSBP1-208ENST00000469123 ZNF56Q15929 161 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 LYPD5Q6UWN5 251 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 LYZL1Q6UWQ5 148 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 ATP6V0E2Q8NHE4 81 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 FRZBQ92765 325 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 RPL36ALQ969Q0 106 aaKnown RBP5.91□□□□□ -1.46
SSBP1-208ENST00000469123 ISOC2Q96AB3 205 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 SAMD10Q9BYL1 202 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 DPH3P1Q9H4G8 78 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 Q9H8V8 135 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 JPT2Q9H910 190 aa5.91□□□□□ -1.46
SSBP1-208ENST00000469123 KMT2AQ03164 3969 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 TRAV9-2A0A087WT02 112 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 TRAV8-6A0A0B4J262 113 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 C9JQL5 133 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 PPP1R2P9O14990 202 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 SIVA1O15304 175 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 LINC00694P0DN24 101 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 NTF3P20783 257 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 ADIRFQ15847 76 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 TMEM97Q5BJF2 176 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 LELP1Q5T871 98 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 Q6ZR54 194 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 LINC00336Q6ZUF6 198 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 C10orf126Q8N4M7 172 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 C14orf178Q8N769 122 aaPredicted RBP5.9□□□□□ -1.46
SSBP1-208ENST00000469123 OR10G8Q8NGN5 311 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 VPS25Q9BRG1 176 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 GTSF1LQ9H1H1 148 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 VCX2Q9H322 139 aa5.9□□□□□ -1.46
SSBP1-208ENST00000469123 TRBV7-3A0A075B6L6 115 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 NBDYA0A0U1RRE5 68 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 A0A1B0GUT8 65 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 F5H697 171 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 F8WDY8 70 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 PTTG1IPP53801 180 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 SRSF3P84103 164 aaKnown RBP5.89□□□□□ -1.47
SSBP1-208ENST00000469123 TWIST1Q15672 202 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 DNAJC30Q96LL9 226 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 ALKBH7Q9BT30 221 aaPredicted RBP5.89□□□□□ -1.47
SSBP1-208ENST00000469123 NAT8BQ9UHF3 227 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 KIF25-AS1Q9Y6Z4 181 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 V9GYV3 84 aa5.89□□□□□ -1.47
SSBP1-208ENST00000469123 RYR2Q92736 4967 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 MUC21A0A0G2JKD1 596 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 MUC21A0A140T8X8 626 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 A0A1B0GW15 77 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 GAGE12JA6NER3 117 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 HIGD1CA8MV81 97 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 RAB5AP20339 215 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 EVI2AP22794 236 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 GAGE4Q13068 117 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 GAGE5Q13069 117 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 RIGQ13278 110 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 VAMP3Q15836 100 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 GAGE13Q4V321 117 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 DAZ4Q86SG3 579 aaKnown RBP5.88□□□□□ -1.47
SSBP1-208ENST00000469123 GTSF1Q8WW33 167 aa5.88□□□□□ -1.47
SSBP1-208ENST00000469123 DAZ3Q9NR90 486 aaKnown RBP5.88□□□□□ -1.47
SSBP1-208ENST00000469123 IGLV2-18A0A075B6J9 118 aa5.87□□□□□ -1.47
SSBP1-208ENST00000469123 IGHV3-38A0A0C4DH36 116 aa5.87□□□□□ -1.47
SSBP1-208ENST00000469123 MGPP08493 103 aa5.87□□□□□ -1.47
SSBP1-208ENST00000469123 DNAH10OSP0CZ25 163 aa5.87□□□□□ -1.47
SSBP1-208ENST00000469123 UBE2D3P61077 147 aa5.87□□□□□ -1.47
SSBP1-208ENST00000469123 UBE2D2P62837 147 aa5.87□□□□□ -1.47
SSBP1-208ENST00000469123 OCIAD2Q56VL3 154 aa5.87□□□□□ -1.47
SSBP1-208ENST00000469123 LINC01556Q5JQF7 62 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms