RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 OR4C5Q8NGB2 326 aa10.34□□□□□ -0.75
COL27A1-203ENST00000468565 PRSS3P2Q8NHM4 247 aa10.34□□□□□ -0.75
COL27A1-203ENST00000468565 HSPB8Q9UJY1 196 aa10.34□□□□□ -0.75
COL27A1-203ENST00000468565 COX11Q9Y6N1 276 aa10.34□□□□□ -0.75
COL27A1-203ENST00000468565 PRELID3AQ96N28 172 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 KMT2AQ03164 3969 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 IGLL5B9A064 214 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 D6R8Y8 96 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 EMP1P54849 157 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 AMN1Q8IY45 258 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 CNFNQ9BYD5 112 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 DKK2Q9UBU2 259 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 MRPS16Q9Y3D3 137 aaKnown RBP10.33□□□□□ -0.76
COL27A1-203ENST00000468565 LENEPQ9Y5L5 61 aa10.33□□□□□ -0.76
COL27A1-203ENST00000468565 TRAV9-2A0A087WT02 112 aa10.32□□□□□ -0.76
COL27A1-203ENST00000468565 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
COL27A1-203ENST00000468565 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
COL27A1-203ENST00000468565 K7ERU9 68 aa10.32□□□□□ -0.76
COL27A1-203ENST00000468565 MRPL51Q4U2R6 128 aaKnown RBP10.32□□□□□ -0.76
COL27A1-203ENST00000468565 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
COL27A1-203ENST00000468565 TMEM191AQ9H0A3 160 aa10.32□□□□□ -0.76
COL27A1-203ENST00000468565 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
COL27A1-203ENST00000468565 VPS13DQ5THJ4 4388 aa10.32□□□□□ -0.76
COL27A1-203ENST00000468565 DEFB131BA0A096LNP1 70 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 MUC21A0A0G2JKD1 596 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 MUC21A0A140T8X8 626 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 MUC21Q5SSG8 566 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 ATOH7Q8N100 152 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 IGHV4-4A0A075B6R2 117 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 CBY3A6NI87 242 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 HNRNPA3P51991 378 aaKnown RBP10.31□□□□□ -0.76
COL27A1-203ENST00000468565 RNF151Q2KHN1 245 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 MAJINQ3KP22 176 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 FAM222AQ5U5X8 452 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 OR10J6PQ8NGY7 276 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
COL27A1-203ENST00000468565 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
COL27A1-203ENST00000468565 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
COL27A1-203ENST00000468565 TSPOP30536 169 aa10.3□□□□□ -0.76
COL27A1-203ENST00000468565 CKS2P33552 79 aa10.3□□□□□ -0.76
COL27A1-203ENST00000468565 ZNF575Q86XF7 245 aa10.3□□□□□ -0.76
COL27A1-203ENST00000468565 LINC00173Q6ZV60 143 aa10.29□□□□□ -0.76
COL27A1-203ENST00000468565 DNAH6Q9C0G6 4158 aa10.29□□□□□ -0.76
COL27A1-203ENST00000468565 IGKV3D-20A0A0C4DH25 116 aa10.29□□□□□ -0.76
COL27A1-203ENST00000468565 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
COL27A1-203ENST00000468565 ODF3Q96PU9 254 aa10.29□□□□□ -0.76
COL27A1-203ENST00000468565 LOC389332A0A1B0GUA5 103 aa10.28□□□□□ -0.76
COL27A1-203ENST00000468565 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
COL27A1-203ENST00000468565 SPATA12Q7Z6I5 190 aa10.28□□□□□ -0.76
COL27A1-203ENST00000468565 LINC01587Q99440 93 aa10.28□□□□□ -0.76
COL27A1-203ENST00000468565 OCIAD2Q56VL3 154 aa10.27□□□□□ -0.76
COL27A1-203ENST00000468565 Q6ZN92 141 aa10.27□□□□□ -0.76
COL27A1-203ENST00000468565 C11orf21Q9P2W6 132 aa10.27□□□□□ -0.76
COL27A1-203ENST00000468565 TIMM8BQ9Y5J9 83 aaPredicted RBP10.27□□□□□ -0.76
COL27A1-203ENST00000468565 EPPK1P58107 5090 aaKnown RBP10.27□□□□□ -0.77
COL27A1-203ENST00000468565 LYRM9A8MSI8 78 aa10.27□□□□□ -0.77
COL27A1-203ENST00000468565 CACNG7P62955 275 aa10.27□□□□□ -0.77
COL27A1-203ENST00000468565 RNF185Q96GF1 192 aa10.27□□□□□ -0.77
COL27A1-203ENST00000468565 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.77
COL27A1-203ENST00000468565 MSRB1Q9NZV6 116 aa10.27□□□□□ -0.77
COL27A1-203ENST00000468565 NPYP01303 97 aa10.26□□□□□ -0.77
COL27A1-203ENST00000468565 LEPP41159 167 aa10.26□□□□□ -0.77
COL27A1-203ENST00000468565 PLAC8L1A1L4L8 177 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 SMKR1H3BMG3 65 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 PRM2P04554 102 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 DAD1P61803 113 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 STPG4Q8N801 248 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 ST20Q9HBF5 79 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 TRAV21A0A0B4J279 112 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 TRBV7-9A0A0J9YWB2 115 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 NCR2O95944 276 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 AZU1P20160 251 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 CST9LQ9H4G1 147 aa10.25□□□□□ -0.77
COL27A1-203ENST00000468565 SNAI2O43623 268 aa10.24□□□□□ -0.77
COL27A1-203ENST00000468565 HBDP02042 147 aa10.24□□□□□ -0.77
COL27A1-203ENST00000468565 KIR3DS1Q14943 382 aa10.24□□□□□ -0.77
COL27A1-203ENST00000468565 LINC01545Q5VT33 79 aa10.24□□□□□ -0.77
COL27A1-203ENST00000468565 ZFAND2AQ8N6M9 145 aa10.24□□□□□ -0.77
COL27A1-203ENST00000468565 TMEM263Q8WUH6 116 aaKnown RBP10.24□□□□□ -0.77
COL27A1-203ENST00000468565 SCGB1A1P11684 91 aa10.23□□□□□ -0.77
COL27A1-203ENST00000468565 PRR9Q5T870 116 aa10.23□□□□□ -0.77
COL27A1-203ENST00000468565 SPANXN1Q5VSR9 72 aa10.23□□□□□ -0.77
COL27A1-203ENST00000468565 H0Y8G0 127 aa10.23□□□□□ -0.77
COL27A1-203ENST00000468565 FAM19A4Q96LR4 140 aa10.23□□□□□ -0.77
COL27A1-203ENST00000468565 NXT2Q9NPJ8 142 aaKnown RBP10.23□□□□□ -0.77
COL27A1-203ENST00000468565 A0A096LNJ9 63 aa10.22□□□□□ -0.77
COL27A1-203ENST00000468565 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
COL27A1-203ENST00000468565 P0DMU3 169 aa10.22□□□□□ -0.77
COL27A1-203ENST00000468565 FAM231AP0DMU4 169 aa10.22□□□□□ -0.77
COL27A1-203ENST00000468565 FAM231CP0DMU5 169 aa10.22□□□□□ -0.77
COL27A1-203ENST00000468565 HTN1P15515 57 aa10.22□□□□□ -0.77
COL27A1-203ENST00000468565 LINC01546A6NGU7 62 aa10.21□□□□□ -0.77
COL27A1-203ENST00000468565 KLLNB2CW77 178 aa10.21□□□□□ -0.77
COL27A1-203ENST00000468565 H3BVH4 76 aa10.21□□□□□ -0.77
COL27A1-203ENST00000468565 J3KRW8 73 aa10.21□□□□□ -0.77
COL27A1-203ENST00000468565 HTN3P15516 51 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms