RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 UBR5O95071 2799 aaPredicted RBP0.11□□□□□ -2.39
SSB-207ENST00000465871 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
SSB-207ENST00000465871 MAP2P11137 1827 aaKnown RBP0.11□□□□□ -2.39
SSB-207ENST00000465871 IBTKQ9P2D0 1353 aaPredicted RBP0.11□□□□□ -2.39
SSB-207ENST00000465871 TRAV1-2A0A0B4J238 106 aa0.11□□□□□ -2.39
SSB-207ENST00000465871 IFITM1P13164 125 aa0.11□□□□□ -2.39
SSB-207ENST00000465871 CBLN1P23435 193 aa0.11□□□□□ -2.39
SSB-207ENST00000465871 UBE2D1P51668 147 aa0.11□□□□□ -2.39
SSB-207ENST00000465871 INSL4Q14641 139 aa0.11□□□□□ -2.39
SSB-207ENST00000465871 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
SSB-207ENST00000465871 ZNF142P52746 1687 aaPredicted RBP0.11□□□□□ -2.39
SSB-207ENST00000465871 LAMC3Q9Y6N6 1575 aa0.11□□□□□ -2.39
SSB-207ENST00000465871 ASXL3Q9C0F0 2248 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 TMEM2Q9UHN6 1383 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 APOC4-APOC2K7ER74 178 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 HIST1H1DP16402 221 aaKnown RBP0.1□□□□□ -2.39
SSB-207ENST00000465871 SSBP3-AS1Q7Z2R9 100 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 NPVFQ9HCQ7 196 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 LINC00312Q9Y6C7 94 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 MYH6P13533 1939 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 SSC5DA1L4H1 1573 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 UNC13AQ9UPW8 1703 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 CELSR2Q9HCU4 2923 aa0.1□□□□□ -2.39
SSB-207ENST00000465871 CHD9Q3L8U1 2897 aa0.09□□□□□ -2.39
SSB-207ENST00000465871 PHIPQ8WWQ0 1821 aa0.09□□□□□ -2.39
SSB-207ENST00000465871 LRP1Q07954 4544 aaKnown RBP0.09□□□□□ -2.39
SSB-207ENST00000465871 ZNF815PA8K554 130 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 SDF2Q99470 211 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 WFDC6Q9BQY6 131 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 PDCD10Q9BUL8 212 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 TMEM191AQ9H0A3 160 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 CCDC167Q9P0B6 97 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 DAPK1P53355 1430 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 NRXN2Q9P2S2 1712 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 UNC79Q9P2D8 2635 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 CACNA1CQ13936 2221 aa0.09□□□□□ -2.4
SSB-207ENST00000465871 PLXNA1Q9UIW2 1896 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 TRBV10-3A0A0K0K1G6 114 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 CLPSL1A2RUU4 121 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 FAM25AB3EWG3 89 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 FAM25CB3EWG5 89 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 FAM25GB3EWG6 89 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 CFDP00746 253 aaPredicted RBP0.08□□□□□ -2.4
SSB-207ENST00000465871 ARPC4P59998 168 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 RBM3P98179 157 aaKnown RBP0.08□□□□□ -2.4
SSB-207ENST00000465871 CCDC58Q4VC31 144 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 ZNF818PQ6ZRF7 136 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 BAGE3Q86Y29 109 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 DPH3Q96FX2 82 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 U3KQA8 63 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 HRNRQ86YZ3 2850 aaPredicted RBP0.08□□□□□ -2.4
SSB-207ENST00000465871 AKAP11Q9UKA4 1901 aa0.08□□□□□ -2.4
SSB-207ENST00000465871 MUC22E2RYF6 1773 aaPredicted RBP0.08□□□□□ -2.4
SSB-207ENST00000465871 CEP152O94986 1710 aa0.07□□□□□ -2.4
SSB-207ENST00000465871 UNC13BO14795 1591 aa0.07□□□□□ -2.4
SSB-207ENST00000465871 CELSR1Q9NYQ6 3014 aa0.07□□□□□ -2.4
SSB-207ENST00000465871 PIGBOS1A0A0B4J2F0 54 aa0.07□□□□□ -2.4
SSB-207ENST00000465871 PAIP2BQ9ULR5 123 aaKnown RBP0.07□□□□□ -2.4
SSB-207ENST00000465871 ADGRB1O14514 1584 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 ARFGEF1Q9Y6D6 1849 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 GOLGA3Q08378 1498 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 HCG22E2RYF7 251 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 G3V318 75 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 PPP1R17O96001 155 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 CCL8P80075 99 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 C10orf128Q5T292 105 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 CFAP126Q5VTH2 177 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 COPS9Q8WXC6 57 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 AQP10Q96PS8 301 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 FAM107BQ9H098 131 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 R4GMQ9 66 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 ZMYM4Q5VZL5 1548 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 PARP14Q460N5 1801 aa0.06□□□□□ -2.4
SSB-207ENST00000465871 ZNF518AQ6AHZ1 1483 aa0.05□□□□□ -2.4
SSB-207ENST00000465871 TRAV13-2A0A0B4J235 113 aa0.05□□□□□ -2.4
SSB-207ENST00000465871 A0A0D9SFI3 127 aa0.05□□□□□ -2.4
SSB-207ENST00000465871 GNG7O60262 68 aa0.05□□□□□ -2.4
SSB-207ENST00000465871 ARL11Q969Q4 196 aa0.05□□□□□ -2.4
SSB-207ENST00000465871 TSC22D3Q99576 134 aa0.05□□□□□ -2.4
SSB-207ENST00000465871 SCN3BQ9NY72 215 aa0.05□□□□□ -2.4
SSB-207ENST00000465871 PRO0255Q9UI72 69 aa0.05□□□□□ -2.4
SSB-207ENST00000465871 CASKIN1Q8WXD9 1431 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 SPTBN2O15020 2390 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 CTXND1A0A1B0GTU2 59 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 PIN1P1O15428 100 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 SIX6O95475 246 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 SPINK8P0C7L1 97 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 SELENOWP63302 87 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 TTC9CQ8N5M4 171 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 LINC00470Q9BZP3 86 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 AGPAT4-IT1Q9H0P7 198 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 LAMB1P07942 1786 aa0.04□□□□□ -2.4
SSB-207ENST00000465871 IFT140Q96RY7 1462 aa0.03□□□□□ -2.4
SSB-207ENST00000465871 HIVEP3Q5T1R4 2406 aa0.03□□□□□ -2.4
SSB-207ENST00000465871 M0R135 149 aa0.03□□□□□ -2.4
SSB-207ENST00000465871 HAMPP81172 84 aa0.03□□□□□ -2.4
SSB-207ENST00000465871 SPAG11BQ08648 103 aa0.03□□□□□ -2.4
SSB-207ENST00000465871 MEIG1Q5JSS6 88 aa0.03□□□□□ -2.4
SSB-207ENST00000465871 Q5VV11 94 aa0.03□□□□□ -2.4
SSB-207ENST00000465871 SPAG11AQ6PDA7 123 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms