RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 M0QY20 66 aa12.11□□□□□ -0.47
PTPRU-206ENST00000465525 SLC25A29Q8N8R3 303 aa12.11□□□□□ -0.47
PTPRU-206ENST00000465525 MRAP2Q96G30 205 aa12.11□□□□□ -0.47
PTPRU-206ENST00000465525 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
PTPRU-206ENST00000465525 PRELID3AQ96N28 172 aa12.1□□□□□ -0.47
PTPRU-206ENST00000465525 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
PTPRU-206ENST00000465525 A0A0J9YY99 117 aa12.1□□□□□ -0.47
PTPRU-206ENST00000465525 NPYP01303 97 aa12.1□□□□□ -0.47
PTPRU-206ENST00000465525 SRIP30626 198 aa12.1□□□□□ -0.47
PTPRU-206ENST00000465525 ORMDL3Q8N138 153 aa12.1□□□□□ -0.47
PTPRU-206ENST00000465525 K7EQD1 137 aa12.09□□□□□ -0.47
PTPRU-206ENST00000465525 NRACQ8N912 160 aa12.09□□□□□ -0.47
PTPRU-206ENST00000465525 ALKBH7Q9BT30 221 aaPredicted RBP12.09□□□□□ -0.47
PTPRU-206ENST00000465525 SMIM6P0DI80 62 aa12.08□□□□□ -0.48
PTPRU-206ENST00000465525 S100A2P29034 98 aa12.08□□□□□ -0.48
PTPRU-206ENST00000465525 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
PTPRU-206ENST00000465525 TRAV26-1A0A087WT03 109 aa12.07□□□□□ -0.48
PTPRU-206ENST00000465525 DEFB131BA0A096LNP1 70 aa12.07□□□□□ -0.48
PTPRU-206ENST00000465525 CIDEAO60543 219 aa12.07□□□□□ -0.48
PTPRU-206ENST00000465525 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
PTPRU-206ENST00000465525 CRYBA4P53673 196 aa12.07□□□□□ -0.48
PTPRU-206ENST00000465525 OR10J3Q5JRS4 329 aa12.07□□□□□ -0.48
PTPRU-206ENST00000465525 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
PTPRU-206ENST00000465525 PPBPP02775 128 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 HIST3H2BBQ8N257 126 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 NEXN-AS1Q8NBZ9 246 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 PRO0255Q9UI72 69 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 TRBV6-4A0A1B0GX49 114 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 H7C1H1 209 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 PAX4O43316 350 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 GAGE1Q13065 139 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 GAGE4Q13068 117 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 GAGE5Q13069 117 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 GAGE13Q4V321 117 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 C12orf57Q99622 126 aa12.06□□□□□ -0.48
PTPRU-206ENST00000465525 LOC389332A0A1B0GUA5 103 aa12.05□□□□□ -0.48
PTPRU-206ENST00000465525 GYPEP15421 78 aa12.05□□□□□ -0.48
PTPRU-206ENST00000465525 RHOHQ15669 191 aa12.05□□□□□ -0.48
PTPRU-206ENST00000465525 NEGR1Q7Z3B1 354 aa12.05□□□□□ -0.48
PTPRU-206ENST00000465525 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
PTPRU-206ENST00000465525 TRAV10A0A0B4J240 114 aa12.04□□□□□ -0.48
PTPRU-206ENST00000465525 ZNRF2Q8NHG8 242 aa12.04□□□□□ -0.48
PTPRU-206ENST00000465525 PRADC1Q9BSG0 188 aa12.04□□□□□ -0.48
PTPRU-206ENST00000465525 PHLDA1Q8WV24 401 aaPredicted RBP12.03□□□□□ -0.48
PTPRU-206ENST00000465525 TNFRSF18Q9Y5U5 241 aa12.03□□□□□ -0.48
PTPRU-206ENST00000465525 C18orf32Q8TCD1 76 aa12.03□□□□□ -0.48
PTPRU-206ENST00000465525 ST20Q9HBF5 79 aa12.03□□□□□ -0.48
PTPRU-206ENST00000465525 A0A096LPF7 62 aa12.02□□□□□ -0.49
PTPRU-206ENST00000465525 IGHV3-38A0A0C4DH36 116 aa12.02□□□□□ -0.49
PTPRU-206ENST00000465525 TRBV10-1A0A0K0K1A3 114 aa12.01□□□□□ -0.49
PTPRU-206ENST00000465525 SDHAF1A6NFY7 115 aa12.01□□□□□ -0.49
PTPRU-206ENST00000465525 IFITM10A6NMD0 228 aa12.01□□□□□ -0.49
PTPRU-206ENST00000465525 SUMO2P61956 95 aaKnown RBP12.01□□□□□ -0.49
PTPRU-206ENST00000465525 RPL36AP83881 106 aaKnown RBP12.01□□□□□ -0.49
PTPRU-206ENST00000465525 RPL36ALQ969Q0 106 aaKnown RBP12.01□□□□□ -0.49
PTPRU-206ENST00000465525 MAP1LC3AQ9H492 121 aa12.01□□□□□ -0.49
PTPRU-206ENST00000465525 TRBV7-3A0A075B6L6 115 aa12□□□□□ -0.49
PTPRU-206ENST00000465525 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
PTPRU-206ENST00000465525 MUC7Q8TAX7 377 aa12□□□□□ -0.49
PTPRU-206ENST00000465525 LAMTOR2Q9Y2Q5 125 aa12□□□□□ -0.49
PTPRU-206ENST00000465525 PPP1R17O96001 155 aa12□□□□□ -0.49
PTPRU-206ENST00000465525 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
PTPRU-206ENST00000465525 DNAJC30Q96LL9 226 aa12□□□□□ -0.49
PTPRU-206ENST00000465525 TMEM70Q9BUB7 260 aa12□□□□□ -0.49
PTPRU-206ENST00000465525 FABP4P15090 132 aa11.99□□□□□ -0.49
PTPRU-206ENST00000465525 PDZD11Q5EBL8 140 aa11.99□□□□□ -0.49
PTPRU-206ENST00000465525 OR10D4PQ8NGN7 298 aa11.99□□□□□ -0.49
PTPRU-206ENST00000465525 HIST1H2BLQ99880 126 aa11.99□□□□□ -0.49
PTPRU-206ENST00000465525 C20orf78Q9BR46 151 aa11.99□□□□□ -0.49
PTPRU-206ENST00000465525 SMIM2Q9BVW6 85 aa11.99□□□□□ -0.49
PTPRU-206ENST00000465525 DNAH7Q8WXX0 4024 aa11.99□□□□□ -0.49
PTPRU-206ENST00000465525 NUDT3O95989 172 aa11.98□□□□□ -0.49
PTPRU-206ENST00000465525 UBE2D3P61077 147 aa11.98□□□□□ -0.49
PTPRU-206ENST00000465525 UBE2D2P62837 147 aa11.98□□□□□ -0.49
PTPRU-206ENST00000465525 CEMP1Q6PRD7 247 aaPredicted RBP11.98□□□□□ -0.49
PTPRU-206ENST00000465525 TMEM18Q96B42 140 aa11.98□□□□□ -0.49
PTPRU-206ENST00000465525 NUPR2A6NF83 97 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 IGLL5B9A064 214 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 LINC00694P0DN24 101 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 POLR2KP53803 58 aaKnown RBP11.97□□□□□ -0.49
PTPRU-206ENST00000465525 BAGE3Q86Y29 109 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 PRSS3P2Q8NHM4 247 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
PTPRU-206ENST00000465525 ICOSQ9Y6W8 199 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 TCAPO15273 167 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 PMCHP20382 165 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 Q0VG73 95 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 URB1-AS1Q96HZ7 61 aa11.97□□□□□ -0.49
PTPRU-206ENST00000465525 IGLV2-18A0A075B6J9 118 aa11.96□□□□□ -0.5
PTPRU-206ENST00000465525 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.5
PTPRU-206ENST00000465525 NIT1Q86X76 327 aa11.96□□□□□ -0.5
PTPRU-206ENST00000465525 KLK5Q9Y337 293 aaPredicted RBP11.96□□□□□ -0.5
PTPRU-206ENST00000465525 VCYO14598 125 aa11.95□□□□□ -0.5
PTPRU-206ENST00000465525 MRPL23Q16540 153 aaKnown RBP11.95□□□□□ -0.5
PTPRU-206ENST00000465525 ZFAND6Q6FIF0 208 aa11.95□□□□□ -0.5
PTPRU-206ENST00000465525 Q8N8P6 123 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms