RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 NEXN-AS1Q8NBZ9 246 aa11.64□□□□□ -0.55
USP39-211ENST00000465282 K7EP13 123 aa11.63□□□□□ -0.55
USP39-211ENST00000465282 SIVA1O15304 175 aa11.63□□□□□ -0.55
USP39-211ENST00000465282 S100A8P05109 93 aa11.63□□□□□ -0.55
USP39-211ENST00000465282 LELP1Q5T871 98 aa11.63□□□□□ -0.55
USP39-211ENST00000465282 RASL11AQ6T310 242 aa11.63□□□□□ -0.55
USP39-211ENST00000465282 CTDSP1Q9GZU7 261 aa11.63□□□□□ -0.55
USP39-211ENST00000465282 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
USP39-211ENST00000465282 RYR2Q92736 4967 aa11.62□□□□□ -0.55
USP39-211ENST00000465282 TRAV8-6A0A0B4J262 113 aa11.62□□□□□ -0.55
USP39-211ENST00000465282 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
USP39-211ENST00000465282 ATP5L2Q7Z4Y8 100 aa11.62□□□□□ -0.55
USP39-211ENST00000465282 DAZ4Q86SG3 579 aaKnown RBP11.62□□□□□ -0.55
USP39-211ENST00000465282 IMMP2LQ96T52 175 aa11.62□□□□□ -0.55
USP39-211ENST00000465282 NIT2Q9NQR4 276 aa11.62□□□□□ -0.55
USP39-211ENST00000465282 DAZ3Q9NR90 486 aaKnown RBP11.62□□□□□ -0.55
USP39-211ENST00000465282 TNFRSF18Q9Y5U5 241 aa11.62□□□□□ -0.55
USP39-211ENST00000465282 HYDINQ4G0P3 5121 aa11.62□□□□□ -0.55
USP39-211ENST00000465282 TMEM97Q5BJF2 176 aa11.61□□□□□ -0.55
USP39-211ENST00000465282 Q6ZR54 194 aa11.61□□□□□ -0.55
USP39-211ENST00000465282 IGLV2-18A0A075B6J9 118 aa11.6□□□□□ -0.55
USP39-211ENST00000465282 NBDYA0A0U1RRE5 68 aa11.6□□□□□ -0.55
USP39-211ENST00000465282 TMEM242Q9NWH2 141 aa11.6□□□□□ -0.55
USP39-211ENST00000465282 TRAV9-2A0A087WT02 112 aa11.59□□□□□ -0.55
USP39-211ENST00000465282 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
USP39-211ENST00000465282 HBBP68871 147 aa11.59□□□□□ -0.55
USP39-211ENST00000465282 NDUFA5Q16718 116 aa11.59□□□□□ -0.55
USP39-211ENST00000465282 OR10J3Q5JRS4 329 aa11.59□□□□□ -0.55
USP39-211ENST00000465282 GATD1Q8NB37 220 aa11.59□□□□□ -0.55
USP39-211ENST00000465282 MRAP2Q96G30 205 aa11.59□□□□□ -0.55
USP39-211ENST00000465282 IGHV3-38A0A0C4DH36 116 aa11.58□□□□□ -0.56
USP39-211ENST00000465282 A0A1B0GXF2 115 aa11.58□□□□□ -0.56
USP39-211ENST00000465282 DNAH10OSP0CZ25 163 aa11.58□□□□□ -0.56
USP39-211ENST00000465282 RAB4AP20338 218 aa11.58□□□□□ -0.56
USP39-211ENST00000465282 RHEBQ15382 184 aa11.58□□□□□ -0.56
USP39-211ENST00000465282 M0R2N4 97 aa11.57□□□□□ -0.56
USP39-211ENST00000465282 PPP1R17O96001 155 aa11.57□□□□□ -0.56
USP39-211ENST00000465282 CAMPP49913 170 aa11.57□□□□□ -0.56
USP39-211ENST00000465282 KCNIP4Q6PIL6 250 aa11.57□□□□□ -0.56
USP39-211ENST00000465282 BTF3L4Q96K17 158 aa11.57□□□□□ -0.56
USP39-211ENST00000465282 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
USP39-211ENST00000465282 LINC01556Q5JQF7 62 aa11.56□□□□□ -0.56
USP39-211ENST00000465282 FAM104BQ5XKR9 115 aa11.56□□□□□ -0.56
USP39-211ENST00000465282 MRPL54Q6P161 138 aaKnown RBP11.56□□□□□ -0.56
USP39-211ENST00000465282 WFDC10BQ8IUB3 73 aa11.56□□□□□ -0.56
USP39-211ENST00000465282 AMN1Q8IY45 258 aa11.56□□□□□ -0.56
USP39-211ENST00000465282 CLRN3Q8NCR9 226 aa11.56□□□□□ -0.56
USP39-211ENST00000465282 RNF185Q96GF1 192 aa11.56□□□□□ -0.56
USP39-211ENST00000465282 TRBV6-8A0A0A6YYG3 113 aa11.55□□□□□ -0.56
USP39-211ENST00000465282 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
USP39-211ENST00000465282 TRBV6-5A0A0K0K1A5 114 aa11.55□□□□□ -0.56
USP39-211ENST00000465282 C7orf77A4D0Y5 90 aa11.55□□□□□ -0.56
USP39-211ENST00000465282 SVBPQ8N300 66 aa11.55□□□□□ -0.56
USP39-211ENST00000465282 C10orf126Q8N4M7 172 aa11.55□□□□□ -0.56
USP39-211ENST00000465282 S100PP25815 95 aa11.54□□□□□ -0.56
USP39-211ENST00000465282 SNAPINO95295 136 aa11.53□□□□□ -0.56
USP39-211ENST00000465282 APOC3P02656 99 aa11.53□□□□□ -0.56
USP39-211ENST00000465282 PKIAP61925 76 aa11.53□□□□□ -0.56
USP39-211ENST00000465282 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
USP39-211ENST00000465282 CHCHD7Q9BUK0 85 aa11.53□□□□□ -0.56
USP39-211ENST00000465282 RPL39LQ96EH5 51 aaKnown RBP11.52□□□□□ -0.57
USP39-211ENST00000465282 URGCP-MRPS24S4R325 110 aa11.52□□□□□ -0.57
USP39-211ENST00000465282 BIRC6Q9NR09 4857 aa11.52□□□□□ -0.57
USP39-211ENST00000465282 TRBV25-1A0A075B6N4 114 aa11.51□□□□□ -0.57
USP39-211ENST00000465282 PPBPP02775 128 aa11.51□□□□□ -0.57
USP39-211ENST00000465282 IQCJQ1A5X6 159 aa11.51□□□□□ -0.57
USP39-211ENST00000465282 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
USP39-211ENST00000465282 C6orf223Q8N319 242 aa11.51□□□□□ -0.57
USP39-211ENST00000465282 ST20Q9HBF5 79 aa11.51□□□□□ -0.57
USP39-211ENST00000465282 RPS10P5Q9NQ39 176 aa11.51□□□□□ -0.57
USP39-211ENST00000465282 EPPK1P58107 5090 aaKnown RBP11.5□□□□□ -0.57
USP39-211ENST00000465282 IGHV1-24A0A0C4DH33 117 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 SDHAF1A6NFY7 115 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 NCR2O95944 276 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 CKS2P33552 79 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 COTL1Q14019 142 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 NTM-AS1Q6ZSK4 140 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 LINC00336Q6ZUF6 198 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 NIT1Q86X76 327 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 KRTAP1-5Q9BYS1 174 aa11.5□□□□□ -0.57
USP39-211ENST00000465282 TRBV24-1A0A075B6N3 115 aa11.49□□□□□ -0.57
USP39-211ENST00000465282 NFE4Q86UQ8 179 aa11.49□□□□□ -0.57
USP39-211ENST00000465282 DNAH2Q9P225 4427 aa11.49□□□□□ -0.57
USP39-211ENST00000465282 A0A087WX48 190 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 I3L3M4 83 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 POLR2KP53803 58 aaKnown RBP11.48□□□□□ -0.57
USP39-211ENST00000465282 LAGE3Q14657 143 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 ELOBQ15370 118 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 COX19Q49B96 90 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 SLC7A5P1Q8MH63 180 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 NRACQ8N912 160 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 CHCHD5Q9BSY4 110 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 TMEM70Q9BUB7 260 aa11.48□□□□□ -0.57
USP39-211ENST00000465282 FRAS1Q86XX4 4008 aa11.47□□□□□ -0.57
USP39-211ENST00000465282 TRBV27A0A0K0K1C4 114 aa11.47□□□□□ -0.57
USP39-211ENST00000465282 IBA57-AS1B1ANH7 110 aa11.47□□□□□ -0.57
USP39-211ENST00000465282 PHOX2AO14813 284 aa11.47□□□□□ -0.57
USP39-211ENST00000465282 GAS8-AS1O95177 125 aa11.47□□□□□ -0.57
USP39-211ENST00000465282 PMCHP20382 165 aa11.47□□□□□ -0.57
USP39-211ENST00000465282 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms