RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 K7ERJ3 54 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 LEPP41159 167 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 TCTAP57738 103 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 SMAGPQ0VAQ4 97 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 ODF3L2Q3SX64 289 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 MTURNQ8N3F0 131 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 Q8N8P6 123 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 OR10J6PQ8NGY7 276 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 MRAP2Q96G30 205 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 C18orf15Q96N68 181 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 CLUHP3Q96NS8 147 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 GTSF1LQ9H1H1 148 aa5.74□□□□□ -1.49
USP4-207ENST00000462673 IGKV2D-26A0A0A0MRZ7 120 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 TMEM238LA0A1B0GVL6 79 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 A6NJY4 79 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 IGLL5B9A064 214 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 SMKR1H3BMG3 65 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 PRSS1P07477 247 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 CRIP1P50238 77 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 RRN3P1Q2M238 152 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 ZC2HC1BQ5TFG8 222 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 MRPL53Q96EL3 112 aaKnown RBP5.73□□□□□ -1.49
USP4-207ENST00000462673 TP53TG1Q9Y2A0 90 aa5.73□□□□□ -1.49
USP4-207ENST00000462673 IGKV2-40A0A087WW87 121 aaPredicted RBP5.72□□□□□ -1.49
USP4-207ENST00000462673 A0A1B0GWB2 263 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 RBMY1BA6NDE4 496 aaKnown RBP5.72□□□□□ -1.49
USP4-207ENST00000462673 RBMY1EA6NEQ0 496 aaKnown RBP5.72□□□□□ -1.49
USP4-207ENST00000462673 H3BMM0 161 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 M0R3E3 92 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 SOCS3O14543 225 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 TNFRSF6BO95407 300 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 IGKV2D-40P01614 121 aaPredicted RBP5.72□□□□□ -1.49
USP4-207ENST00000462673 RBMY1DP0C7P1 496 aaKnown RBP5.72□□□□□ -1.49
USP4-207ENST00000462673 RPL35AP18077 110 aaKnown RBP5.72□□□□□ -1.49
USP4-207ENST00000462673 GAGE13Q4V321 117 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 SBSPONQ8IVN8 264 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 IL17DQ8TAD2 202 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 RNF185Q96GF1 192 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 LINC00477Q96M19 166 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 HIST1H4GQ99525 98 aa5.72□□□□□ -1.49
USP4-207ENST00000462673 FBN3Q75N90 2809 aa5.71□□□□□ -1.49
USP4-207ENST00000462673 TRBV7-3A0A075B6L6 115 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 A0A087WX48 190 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 TRAV12-1A0A0B4J245 112 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 SPRY2O43597 315 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 APOMO95445 188 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 FXYD7P58549 80 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 CKS1BP61024 79 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 C12orf74Q32Q52 190 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 TRPT1Q86TN4 253 aaKnown RBP5.71□□□□□ -1.5
USP4-207ENST00000462673 OR11H2Q8NH07 326 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 C17orf77Q96MU5 243 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 ASCL2Q99929 193 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 TM2D3Q9BRN9 247 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 VCX2Q9H322 139 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 MRPL16Q9NX20 251 aaKnown RBP5.71□□□□□ -1.5
USP4-207ENST00000462673 NBEAL1Q6ZS30 2694 aa5.71□□□□□ -1.5
USP4-207ENST00000462673 A0A0J9YX75 114 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 RBAKDNA6NC62 111 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 SMIM9A6NGZ8 99 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 KNCNA6PVL3 124 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 FABP5P3A8MUU1 101 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 F8VRH5 84 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 ORM1P02763 201 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 LAGE3Q14657 143 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 TMEM78Q5T7P6 136 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 Q8TAT8 98 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 WFDC10AQ9H1F0 79 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 HHLA3Q9XRX5 114 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 CYSLTR1Q9Y271 337 aa5.7□□□□□ -1.5
USP4-207ENST00000462673 IGLV2-18A0A075B6J9 118 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 TRAV8-2A0A0B4J237 113 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 PRSS47A8MTI9 375 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 H3BMG7 143 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.69□□□□□ -1.5
USP4-207ENST00000462673 H7C1H1 209 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 WFDC2Q14508 124 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 RNF182Q8N6D2 247 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 RNF183Q96D59 192 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 MRPL35Q9NZE8 188 aaKnown RBP5.69□□□□□ -1.5
USP4-207ENST00000462673 PRO0461Q9UI25 63 aa5.69□□□□□ -1.5
USP4-207ENST00000462673 TRBV7-9A0A0J9YWB2 115 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 MYMXA0A1B0GTQ4 84 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 K7EMI3 77 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 IGKV3-20P01619 116 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 MIFP14174 115 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 ETDBQ3ZM63 59 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 ORMDL2Q53FV1 153 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 ODF3Q96PU9 254 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 TTTY13Q9BZ97 58 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 LENEPQ9Y5L5 61 aa5.68□□□□□ -1.5
USP4-207ENST00000462673 NOTCH1P46531 2555 aa5.67□□□□□ -1.5
USP4-207ENST00000462673 LINC01549A6NIU2 74 aa5.67□□□□□ -1.5
USP4-207ENST00000462673 INSP01308 110 aa5.67□□□□□ -1.5
USP4-207ENST00000462673 ZNF80P51504 273 aaPredicted RBP5.67□□□□□ -1.5
USP4-207ENST00000462673 CRYBA4P53673 196 aa5.67□□□□□ -1.5
USP4-207ENST00000462673 HERVK_113P61574 105 aa5.67□□□□□ -1.5
USP4-207ENST00000462673 FOXI1Q12951 378 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms