RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 SCGB1D1O95968 90 aa8.22□□□□□ -1.09
VPS52-213ENST00000461743 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
VPS52-213ENST00000461743 SRIP30626 198 aa8.22□□□□□ -1.09
VPS52-213ENST00000461743 ZNRF2Q8NHG8 242 aa8.22□□□□□ -1.09
VPS52-213ENST00000461743 DAZAP1Q96EP5 407 aaKnown RBP8.22□□□□□ -1.09
VPS52-213ENST00000461743 PARLQ9H300 379 aa8.22□□□□□ -1.09
VPS52-213ENST00000461743 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
VPS52-213ENST00000461743 TMSB15BA0A087X1C1 80 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 A0A1W2PPQ1 181 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 GRIFINA4D1Z8 144 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 K7EQD1 137 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 ESDP10768 282 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 PCP4P48539 62 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 NEGR1Q7Z3B1 354 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 ZNF575Q86XF7 245 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 PRADC1Q9BSG0 188 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
VPS52-213ENST00000461743 LY96Q9Y6Y9 160 aa8.21□□□□□ -1.1
VPS52-213ENST00000461743 P01737 135 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 NPSP0C0P6 89 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 GYPEP15421 78 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 TIRAPP58753 221 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 RPL19P84098 196 aaKnown RBP8.2□□□□□ -1.1
VPS52-213ENST00000461743 TTC32Q5I0X7 151 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 COL5A1-AS1Q5SY13 56 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 Q6ZR54 194 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 SFRP2Q96HF1 295 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 FAT2Q9NYQ8 4349 aa8.2□□□□□ -1.1
VPS52-213ENST00000461743 M0R381 172 aa8.19□□□□□ -1.1
VPS52-213ENST00000461743 ESRGQ1W209 222 aa8.19□□□□□ -1.1
VPS52-213ENST00000461743 DMRTA1Q5VZB9 504 aa8.19□□□□□ -1.1
VPS52-213ENST00000461743 UFSP1Q6NVU6 142 aa8.19□□□□□ -1.1
VPS52-213ENST00000461743 SLC25A29Q8N8R3 303 aa8.19□□□□□ -1.1
VPS52-213ENST00000461743 TRAPPC1Q9Y5R8 145 aa8.19□□□□□ -1.1
VPS52-213ENST00000461743 NBDYA0A0U1RRE5 68 aa8.18□□□□□ -1.1
VPS52-213ENST00000461743 IGLC6P0CF74 106 aa8.18□□□□□ -1.1
VPS52-213ENST00000461743 LINC00336Q6ZUF6 198 aa8.18□□□□□ -1.1
VPS52-213ENST00000461743 OR2D3Q8NGH3 330 aa8.18□□□□□ -1.1
VPS52-213ENST00000461743 VAMP8Q9BV40 100 aa8.18□□□□□ -1.1
VPS52-213ENST00000461743 F2Z2F3 143 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 K7EP13 123 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 CACNG7P62955 275 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 COTL1Q14019 142 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 C21orf62-AS1Q17RA5 79 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 SPANXN1Q5VSR9 72 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 FAM231DQ6ZW35 169 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 FER1L6-AS1Q8NA97 138 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 OR10AG1Q8NH19 301 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 AP1S3Q96PC3 154 aa8.17□□□□□ -1.1
VPS52-213ENST00000461743 RPP21Q9H633 154 aaKnown RBP8.17□□□□□ -1.1
VPS52-213ENST00000461743 IGLV2-18A0A075B6J9 118 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 IGHV3-73A0A0B4J1V6 119 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 TRBV10-1A0A0K0K1A3 114 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 K7EN84 100 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 LINC00694P0DN24 101 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 CTRLP40313 264 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 CT83Q5H943 113 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 FAM74A4Q5TZK3 123 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 OCC1Q8TAD7 63 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 Q9H8V8 135 aa8.16□□□□□ -1.1
VPS52-213ENST00000461743 EPPK1P58107 5090 aaKnown RBP8.15□□□□□ -1.1
VPS52-213ENST00000461743 SIVA1O15304 175 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 CRYGDP07320 174 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 WDR73Q6P4I2 378 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 LINC01551Q86U37 167 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 NUDT10Q8NFP7 164 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 ORAOV1Q8WV07 137 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 NUDT11Q96G61 164 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 CNFNQ9BYD5 112 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 SAMD10Q9BYL1 202 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 JPT2Q9H910 190 aa8.15□□□□□ -1.1
VPS52-213ENST00000461743 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
VPS52-213ENST00000461743 M0R2N4 97 aa8.14□□□□□ -1.11
VPS52-213ENST00000461743 SMIM17P0DL12 118 aa8.14□□□□□ -1.11
VPS52-213ENST00000461743 Q0VG73 95 aa8.14□□□□□ -1.11
VPS52-213ENST00000461743 A0A087WWL8 130 aa8.13□□□□□ -1.11
VPS52-213ENST00000461743 ZNF56Q15929 161 aa8.13□□□□□ -1.11
VPS52-213ENST00000461743 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
VPS52-213ENST00000461743 OR10G8Q8NGN5 311 aa8.13□□□□□ -1.11
VPS52-213ENST00000461743 RNASE7Q9H1E1 156 aaKnown RBP8.13□□□□□ -1.11
VPS52-213ENST00000461743 GTSF1LQ9H1H1 148 aa8.13□□□□□ -1.11
VPS52-213ENST00000461743 UQCR10Q9UDW1 63 aa8.13□□□□□ -1.11
VPS52-213ENST00000461743 PKD1P98161 4303 aa8.13□□□□□ -1.11
VPS52-213ENST00000461743 A8MWL6 223 aa8.12□□□□□ -1.11
VPS52-213ENST00000461743 COX19Q49B96 90 aa8.12□□□□□ -1.11
VPS52-213ENST00000461743 LELP1Q5T871 98 aa8.12□□□□□ -1.11
VPS52-213ENST00000461743 Q6ZSN1 163 aa8.12□□□□□ -1.11
VPS52-213ENST00000461743 C6orf223Q8N319 242 aa8.12□□□□□ -1.11
VPS52-213ENST00000461743 C14orf178Q8N769 122 aaPredicted RBP8.12□□□□□ -1.11
VPS52-213ENST00000461743 ATP6V0E2Q8NHE4 81 aa8.12□□□□□ -1.11
VPS52-213ENST00000461743 TPPP3Q9BW30 176 aa8.12□□□□□ -1.11
VPS52-213ENST00000461743 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
VPS52-213ENST00000461743 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
VPS52-213ENST00000461743 TRAV9-2A0A087WT02 112 aa8.11□□□□□ -1.11
VPS52-213ENST00000461743 TRAV8-6A0A0B4J262 113 aa8.11□□□□□ -1.11
VPS52-213ENST00000461743 FAM231BA6NCW3 169 aa8.11□□□□□ -1.11
VPS52-213ENST00000461743 H7C1H1 209 aa8.11□□□□□ -1.11
VPS52-213ENST00000461743 RTL8CO15255 209 aa8.11□□□□□ -1.11
VPS52-213ENST00000461743 NUPR1O60356 82 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms