RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 IL36BQ9NZH7 164 aa11.49□□□□□ -0.57
TOP3A-202ENST00000461127 GNRH2O43555 120 aa11.48□□□□□ -0.57
TOP3A-202ENST00000461127 TYMSP04818 313 aa11.48□□□□□ -0.57
TOP3A-202ENST00000461127 S100PP25815 95 aa11.48□□□□□ -0.57
TOP3A-202ENST00000461127 KCNIP4Q6PIL6 250 aa11.48□□□□□ -0.57
TOP3A-202ENST00000461127 TPPP3Q9BW30 176 aa11.48□□□□□ -0.57
TOP3A-202ENST00000461127 TMEM242Q9NWH2 141 aa11.48□□□□□ -0.57
TOP3A-202ENST00000461127 IGHV3-38A0A0C4DH36 116 aa11.47□□□□□ -0.57
TOP3A-202ENST00000461127 CXCL1P09341 107 aa11.47□□□□□ -0.57
TOP3A-202ENST00000461127 GYPEP15421 78 aa11.47□□□□□ -0.57
TOP3A-202ENST00000461127 GFRA4Q9GZZ7 299 aa11.47□□□□□ -0.57
TOP3A-202ENST00000461127 Q9HAA7 133 aa11.47□□□□□ -0.57
TOP3A-202ENST00000461127 TP53TG3Q9ULZ0 132 aa11.47□□□□□ -0.57
TOP3A-202ENST00000461127 FAM231BA6NCW3 169 aa11.46□□□□□ -0.57
TOP3A-202ENST00000461127 IBA57-AS1B1ANH7 110 aa11.46□□□□□ -0.57
TOP3A-202ENST00000461127 FER1L6-AS1Q8NA97 138 aa11.46□□□□□ -0.57
TOP3A-202ENST00000461127 IMMP2LQ96T52 175 aa11.46□□□□□ -0.57
TOP3A-202ENST00000461127 SMCO4Q9NRQ5 59 aa11.46□□□□□ -0.57
TOP3A-202ENST00000461127 NAT8BQ9UHF3 227 aa11.46□□□□□ -0.57
TOP3A-202ENST00000461127 SMIM27A0A1W2PRY6 76 aa11.45□□□□□ -0.58
TOP3A-202ENST00000461127 H3BVH4 76 aa11.45□□□□□ -0.58
TOP3A-202ENST00000461127 BORCS7Q96B45 105 aa11.45□□□□□ -0.58
TOP3A-202ENST00000461127 PGLYRP4Q96LB8 373 aa11.45□□□□□ -0.58
TOP3A-202ENST00000461127 IGHV3-16A0A0C4DH30 117 aa11.44□□□□□ -0.58
TOP3A-202ENST00000461127 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
TOP3A-202ENST00000461127 ARMS2P0C7Q2 107 aa11.44□□□□□ -0.58
TOP3A-202ENST00000461127 LINC01556Q5JQF7 62 aa11.44□□□□□ -0.58
TOP3A-202ENST00000461127 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
TOP3A-202ENST00000461127 SH2D6Q7Z4S9 175 aa11.44□□□□□ -0.58
TOP3A-202ENST00000461127 GTSF1Q8WW33 167 aa11.44□□□□□ -0.58
TOP3A-202ENST00000461127 URGCP-MRPS24S4R325 110 aa11.44□□□□□ -0.58
TOP3A-202ENST00000461127 F2Z2F3 143 aa11.43□□□□□ -0.58
TOP3A-202ENST00000461127 SCO1O75880 301 aa11.43□□□□□ -0.58
TOP3A-202ENST00000461127 IGLC6P0CF74 106 aa11.43□□□□□ -0.58
TOP3A-202ENST00000461127 LYZL1Q6UWQ5 148 aa11.43□□□□□ -0.58
TOP3A-202ENST00000461127 SCXQ7RTU7 201 aa11.43□□□□□ -0.58
TOP3A-202ENST00000461127 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
TOP3A-202ENST00000461127 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
TOP3A-202ENST00000461127 TM2D2Q9BX73 214 aa11.43□□□□□ -0.58
TOP3A-202ENST00000461127 OR5AL1P0C617 328 aa11.42□□□□□ -0.58
TOP3A-202ENST00000461127 ZNF479Q96JC4 524 aa11.42□□□□□ -0.58
TOP3A-202ENST00000461127 PHLDA3Q9Y5J5 127 aa11.42□□□□□ -0.58
TOP3A-202ENST00000461127 FAT3Q8TDW7 4589 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 TRAV8-6A0A0B4J262 113 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 RS1O15537 224 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 SNAI2O43623 268 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 RNASE3P12724 160 aaKnown RBP11.41□□□□□ -0.58
TOP3A-202ENST00000461127 CTRLP40313 264 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-202ENST00000461127 TIRAPP58753 221 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 C9orf85Q96MD7 179 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 SPXQ9BT56 116 aa11.41□□□□□ -0.58
TOP3A-202ENST00000461127 TRAV9-1A0A075B6T8 112 aa11.4□□□□□ -0.58
TOP3A-202ENST00000461127 MUC21A0A0G2JKD1 596 aa11.4□□□□□ -0.58
TOP3A-202ENST00000461127 MUC21A0A140T8X8 626 aa11.4□□□□□ -0.58
TOP3A-202ENST00000461127 A0A1B0GUT8 65 aa11.4□□□□□ -0.58
TOP3A-202ENST00000461127 KRTAP10-4P60372 401 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-202ENST00000461127 SSTP61278 116 aa11.4□□□□□ -0.58
TOP3A-202ENST00000461127 CACNG7P62955 275 aa11.4□□□□□ -0.58
TOP3A-202ENST00000461127 BTF3L4Q96K17 158 aa11.4□□□□□ -0.58
TOP3A-202ENST00000461127 SSBP4Q9BWG4 385 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-202ENST00000461127 M0R381 172 aa11.39□□□□□ -0.59
TOP3A-202ENST00000461127 RIGQ13278 110 aa11.39□□□□□ -0.59
TOP3A-202ENST00000461127 ZFP82Q8N141 532 aa11.39□□□□□ -0.59
TOP3A-202ENST00000461127 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
TOP3A-202ENST00000461127 CHAC1Q9BUX1 264 aa11.39□□□□□ -0.59
TOP3A-202ENST00000461127 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-202ENST00000461127 ELOBQ15370 118 aa11.38□□□□□ -0.59
TOP3A-202ENST00000461127 TWIST1Q15672 202 aa11.38□□□□□ -0.59
TOP3A-202ENST00000461127 OR10J3Q5JRS4 329 aa11.38□□□□□ -0.59
TOP3A-202ENST00000461127 MRPL54Q6P161 138 aaKnown RBP11.38□□□□□ -0.59
TOP3A-202ENST00000461127 WDR73Q6P4I2 378 aa11.38□□□□□ -0.59
TOP3A-202ENST00000461127 M0R2P5 195 aa11.37□□□□□ -0.59
TOP3A-202ENST00000461127 LAGE3Q14657 143 aa11.37□□□□□ -0.59
TOP3A-202ENST00000461127 ATP5L2Q7Z4Y8 100 aa11.37□□□□□ -0.59
TOP3A-202ENST00000461127 TGIF2-C20orf24A0A0A6YYL0 155 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 A0A1B0GW15 77 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 IGHV3-30P01768 117 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 IGHV3-33P01772 117 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 S100A8P05109 93 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 IGHV3-30-3P0DP02 117 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 IGHV3-30-5P0DP03 117 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 NTF3P20783 257 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 WFDC2Q14508 124 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 ZNF876PQ49A33 203 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 RASL10AQ92737 203 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 CNFNQ9BYD5 112 aa11.36□□□□□ -0.59
TOP3A-202ENST00000461127 TRBV24-1A0A075B6N3 115 aa11.35□□□□□ -0.59
TOP3A-202ENST00000461127 TRAV4A0A0B4J268 109 aa11.35□□□□□ -0.59
TOP3A-202ENST00000461127 LECT2O14960 151 aa11.35□□□□□ -0.59
TOP3A-202ENST00000461127 CAMPP49913 170 aa11.35□□□□□ -0.59
TOP3A-202ENST00000461127 HBBP68871 147 aa11.35□□□□□ -0.59
TOP3A-202ENST00000461127 SMIM15Q7Z3B0 74 aa11.35□□□□□ -0.59
TOP3A-202ENST00000461127 OR4C5Q8NGB2 326 aa11.35□□□□□ -0.59
TOP3A-202ENST00000461127 LOC100131303A0A0U1RQF7 123 aa11.34□□□□□ -0.59
TOP3A-202ENST00000461127 TRGC1P0CF51 173 aa11.34□□□□□ -0.59
TOP3A-202ENST00000461127 RAB4BP61018 213 aa11.34□□□□□ -0.59
TOP3A-202ENST00000461127 LINC01620Q4KN68 170 aa11.34□□□□□ -0.59
TOP3A-202ENST00000461127 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms