RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 TWIST1Q15672 202 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 TTC32Q5I0X7 151 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 OR10J3Q5JRS4 329 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 SOHLH1Q5JUK2 328 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 CLLU1Q5K131 121 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 GTSF1Q8WW33 167 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
RFX3-210ENST00000457373 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 GTSF1LQ9H1H1 148 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 OSTCQ9NRP0 149 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 KIF25-AS1Q9Y6Z4 181 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
RFX3-210ENST00000457373 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
RFX3-210ENST00000457373 EVI2AP22794 236 aa6.88□□□□□ -1.31
RFX3-210ENST00000457373 CTRLP40313 264 aa6.88□□□□□ -1.31
RFX3-210ENST00000457373 TIRAPP58753 221 aa6.88□□□□□ -1.31
RFX3-210ENST00000457373 WDR73Q6P4I2 378 aa6.88□□□□□ -1.31
RFX3-210ENST00000457373 C6orf223Q8N319 242 aa6.88□□□□□ -1.31
RFX3-210ENST00000457373 C15orf54Q8N8G6 183 aa6.88□□□□□ -1.31
RFX3-210ENST00000457373 KRTAP1-5Q9BYS1 174 aa6.88□□□□□ -1.31
RFX3-210ENST00000457373 TRBV10-1A0A0K0K1A3 114 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 LINC00694P0DN24 101 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 LINC00315P59091 139 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 LELP1Q5T871 98 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 LINC00336Q6ZUF6 198 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 NEXN-AS1Q8NBZ9 246 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 OR10G8Q8NGN5 311 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 BORCS7Q96B45 105 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 DPH3P1Q9H4G8 78 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 V9GYV3 84 aa6.87□□□□□ -1.31
RFX3-210ENST00000457373 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
RFX3-210ENST00000457373 TRAV9-2A0A087WT02 112 aa6.86□□□□□ -1.31
RFX3-210ENST00000457373 IGHV3-38A0A0C4DH36 116 aa6.86□□□□□ -1.31
RFX3-210ENST00000457373 UBE2D3P61077 147 aa6.86□□□□□ -1.31
RFX3-210ENST00000457373 UBE2D2P62837 147 aa6.86□□□□□ -1.31
RFX3-210ENST00000457373 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
RFX3-210ENST00000457373 TSKUQ8WUA8 353 aa6.86□□□□□ -1.31
RFX3-210ENST00000457373 IGHV3-30P01768 117 aa6.85□□□□□ -1.31
RFX3-210ENST00000457373 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
RFX3-210ENST00000457373 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
RFX3-210ENST00000457373 IGHV3-30-5P0DP03 117 aa6.85□□□□□ -1.31
RFX3-210ENST00000457373 FOXA3P55318 350 aaPredicted RBP6.85□□□□□ -1.31
RFX3-210ENST00000457373 SMIM15Q7Z3B0 74 aa6.85□□□□□ -1.31
RFX3-210ENST00000457373 CNFNQ9BYD5 112 aa6.85□□□□□ -1.31
RFX3-210ENST00000457373 GFRA4Q9GZZ7 299 aa6.85□□□□□ -1.31
RFX3-210ENST00000457373 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
RFX3-210ENST00000457373 HIGD1CA8MV81 97 aa6.84□□□□□ -1.31
RFX3-210ENST00000457373 H7C1H1 209 aa6.84□□□□□ -1.31
RFX3-210ENST00000457373 DNAH10OSP0CZ25 163 aa6.84□□□□□ -1.31
RFX3-210ENST00000457373 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.84□□□□□ -1.31
RFX3-210ENST00000457373 A0A087WWC5 75 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 A0A1B0GUT8 65 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 FAM231BA6NCW3 169 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 M0QY20 66 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 LINC01556Q5JQF7 62 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 RASL11AQ6T310 242 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 NUP35Q8NFH5 326 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 DNAJC30Q96LL9 226 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 NAT8BQ9UHF3 227 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 DNAH10Q8IVF4 4471 aa6.83□□□□□ -1.32
RFX3-210ENST00000457373 TRAV26-2A0A0B4J265 109 aa6.82□□□□□ -1.32
RFX3-210ENST00000457373 SCGB1D1O95968 90 aa6.82□□□□□ -1.32
RFX3-210ENST00000457373 RIGQ13278 110 aa6.82□□□□□ -1.32
RFX3-210ENST00000457373 C10orf126Q8N4M7 172 aa6.82□□□□□ -1.32
RFX3-210ENST00000457373 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
RFX3-210ENST00000457373 EPPK1P58107 5090 aaKnown RBP6.82□□□□□ -1.32
RFX3-210ENST00000457373 TRBV6-8A0A0A6YYG3 113 aa6.81□□□□□ -1.32
RFX3-210ENST00000457373 TMEM262E9PQX1 116 aa6.81□□□□□ -1.32
RFX3-210ENST00000457373 DAZ4Q86SG3 579 aaKnown RBP6.81□□□□□ -1.32
RFX3-210ENST00000457373 COMMD7Q86VX2 200 aa6.81□□□□□ -1.32
RFX3-210ENST00000457373 Q8N3U1 123 aa6.81□□□□□ -1.32
RFX3-210ENST00000457373 GATD1Q8NB37 220 aa6.81□□□□□ -1.32
RFX3-210ENST00000457373 DEFB104AQ8WTQ1 72 aa6.81□□□□□ -1.32
RFX3-210ENST00000457373 DAZ3Q9NR90 486 aaKnown RBP6.81□□□□□ -1.32
RFX3-210ENST00000457373 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 SMIM27A0A1W2PRY6 76 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 IBA57-AS1B1ANH7 110 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 K7EP13 123 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 TRIAP1O43715 76 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 PNRC1Q12796 327 aaPredicted RBP6.8□□□□□ -1.32
RFX3-210ENST00000457373 TMEM97Q5BJF2 176 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 UQCC3Q6UW78 93 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 NFE4Q86UQ8 179 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 NIT1Q86X76 327 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 RPL39LQ96EH5 51 aaKnown RBP6.8□□□□□ -1.32
RFX3-210ENST00000457373 TMEM191AQ9H0A3 160 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 Q9HAA7 133 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 URGCP-MRPS24S4R325 110 aa6.8□□□□□ -1.32
RFX3-210ENST00000457373 A0A087WX48 190 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 TMEM218A2RU14 115 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 F8W036 122 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 PPP1R2P9O14990 202 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 RAB4AP20338 218 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 CAMPP49913 170 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 KCNIP4Q6PIL6 250 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 AMN1Q8IY45 258 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 CHCHD5Q9BSY4 110 aa6.79□□□□□ -1.32
RFX3-210ENST00000457373 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms