RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 DUX3Q96PT4 197 aa12.96□□□□□ -0.34
CCDC144A-210ENST00000456009 USP24Q9UPU5 2620 aa12.95□□□□□ -0.34
CCDC144A-210ENST00000456009 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
CCDC144A-210ENST00000456009 BBC3Q96PG8 261 aaPredicted RBP12.95□□□□□ -0.34
CCDC144A-210ENST00000456009 RRN3P1Q2M238 152 aa12.95□□□□□ -0.34
CCDC144A-210ENST00000456009 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
CCDC144A-210ENST00000456009 PROK1P58294 105 aa12.94□□□□□ -0.34
CCDC144A-210ENST00000456009 RPL24P83731 157 aaKnown RBP12.94□□□□□ -0.34
CCDC144A-210ENST00000456009 WFDC2Q14508 124 aa12.94□□□□□ -0.34
CCDC144A-210ENST00000456009 NAV2Q8IVL1 2488 aa12.94□□□□□ -0.34
CCDC144A-210ENST00000456009 DEFB131AP59861 70 aa12.94□□□□□ -0.34
CCDC144A-210ENST00000456009 SRSF9Q13242 221 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC144A-210ENST00000456009 MTURNQ8N3F0 131 aa12.94□□□□□ -0.34
CCDC144A-210ENST00000456009 TEX48A0A1B0GUV7 120 aa12.93□□□□□ -0.34
CCDC144A-210ENST00000456009 TRPT1Q86TN4 253 aaKnown RBP12.93□□□□□ -0.34
CCDC144A-210ENST00000456009 CR1P17927 2039 aa12.92□□□□□ -0.34
CCDC144A-210ENST00000456009 MYO9AB2RTY4 2548 aa12.92□□□□□ -0.34
CCDC144A-210ENST00000456009 LINC01549A6NIU2 74 aa12.92□□□□□ -0.34
CCDC144A-210ENST00000456009 PAPPA-AS1Q5QFB9 102 aa12.92□□□□□ -0.34
CCDC144A-210ENST00000456009 RNF152Q8N8N0 203 aa12.92□□□□□ -0.34
CCDC144A-210ENST00000456009 A0A0J9YY99 117 aa12.91□□□□□ -0.34
CCDC144A-210ENST00000456009 Q9UF83 564 aa12.91□□□□□ -0.34
CCDC144A-210ENST00000456009 RBMY1BA6NDE4 496 aaKnown RBP12.91□□□□□ -0.34
CCDC144A-210ENST00000456009 RBMY1EA6NEQ0 496 aaKnown RBP12.91□□□□□ -0.34
CCDC144A-210ENST00000456009 RBMY1DP0C7P1 496 aaKnown RBP12.91□□□□□ -0.34
CCDC144A-210ENST00000456009 NSUN5P1Q3KNT7 163 aa12.91□□□□□ -0.34
CCDC144A-210ENST00000456009 PGPEP1Q9NXJ5 209 aa12.91□□□□□ -0.34
CCDC144A-210ENST00000456009 HERVK_113P61574 105 aa12.9□□□□□ -0.34
CCDC144A-210ENST00000456009 TLN2Q9Y4G6 2542 aa12.9□□□□□ -0.34
CCDC144A-210ENST00000456009 SFTA2Q6UW10 78 aa12.9□□□□□ -0.34
CCDC144A-210ENST00000456009 C20orf203Q8NBC4 194 aa12.9□□□□□ -0.34
CCDC144A-210ENST00000456009 UBR5O95071 2799 aaPredicted RBP12.9□□□□□ -0.35
CCDC144A-210ENST00000456009 TRGV11A0A075B6L2 103 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 AMELXQ99217 191 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 NBPF19A0A087WUL8 3843 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 H3BMM0 161 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 I3L3M4 83 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 UBE2D1P51668 147 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 RHOHQ15669 191 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 SH2D6Q7Z4S9 175 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 TMEM61Q8N0U2 210 aa12.89□□□□□ -0.35
CCDC144A-210ENST00000456009 F8W1H4 67 aa12.88□□□□□ -0.35
CCDC144A-210ENST00000456009 MRPL16Q9NX20 251 aaKnown RBP12.88□□□□□ -0.35
CCDC144A-210ENST00000456009 IGHV3-64A0A075B6Q5 118 aa12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 APOMO95445 188 aa12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 AKAP9Q99996 3911 aa12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 J3QQQ9 107 aa12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 Q5PR19 223 aa12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 Q6ZSN1 163 aa12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 NFE4Q86UQ8 179 aa12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 SPANXB1Q9NS25 103 aaPredicted RBP12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 PRO0461Q9UI25 63 aa12.87□□□□□ -0.35
CCDC144A-210ENST00000456009 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
CCDC144A-210ENST00000456009 ETDBQ3ZM63 59 aa12.86□□□□□ -0.35
CCDC144A-210ENST00000456009 CEMP1Q6PRD7 247 aaPredicted RBP12.86□□□□□ -0.35
CCDC144A-210ENST00000456009 DLX4Q92988 240 aaPredicted RBP12.86□□□□□ -0.35
CCDC144A-210ENST00000456009 FAM104AQ969W3 186 aa12.86□□□□□ -0.35
CCDC144A-210ENST00000456009 A0A0J9YXV3 536 aa12.85□□□□□ -0.35
CCDC144A-210ENST00000456009 KHDC1LQ5JSQ8 128 aa12.85□□□□□ -0.35
CCDC144A-210ENST00000456009 SLC25A29Q8N8R3 303 aa12.85□□□□□ -0.35
CCDC144A-210ENST00000456009 SPAG8Q99932 426 aaPredicted RBP12.85□□□□□ -0.35
CCDC144A-210ENST00000456009 TSPAN13O95857 204 aa12.85□□□□□ -0.35
CCDC144A-210ENST00000456009 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
CCDC144A-210ENST00000456009 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
CCDC144A-210ENST00000456009 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
CCDC144A-210ENST00000456009 TMEM238LA0A1B0GVL6 79 aa12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 TMEM223A0PJW6 202 aa12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 A6NJY4 79 aa12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 DEFB113Q30KQ7 82 aa12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 Q8N2B8 174 aa12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 Q96MF0 132 aa12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 SONP18583 2426 aaKnown RBP12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 ZNF22P17026 224 aaPredicted RBP12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 EPG5Q9HCE0 2579 aa12.84□□□□□ -0.35
CCDC144A-210ENST00000456009 CHD6Q8TD26 2715 aa12.83□□□□□ -0.35
CCDC144A-210ENST00000456009 A8MTW9 85 aa12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 NDUFA11Q86Y39 141 aa12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 VCX2Q9H322 139 aa12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 NF1P21359 2839 aa12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 PRRC2AP48634 2157 aaKnown RBP12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 CFC1BP0CG36 223 aa12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 CFC1P0CG37 223 aa12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 LGALS3P17931 250 aaKnown RBP12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
CCDC144A-210ENST00000456009 NACAE9PAV3 2078 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 APCP25054 2843 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 RHODO00212 210 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 COTL1Q14019 142 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 ZNF843Q8N446 348 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 MAP6D1Q9H9H5 199 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 LOC107984156A0A0G2JMH3 177 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 CD28P10747 220 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 ARL17AQ8IVW1 177 aa12.82□□□□□ -0.36
CCDC144A-210ENST00000456009 M0R2P5 195 aa12.81□□□□□ -0.36
CCDC144A-210ENST00000456009 C4orf3Q8WVX3 66 aa12.81□□□□□ -0.36
CCDC144A-210ENST00000456009 LEPROTO15243 131 aa12.8□□□□□ -0.36
CCDC144A-210ENST00000456009 INSL3P51460 131 aa12.8□□□□□ -0.36
CCDC144A-210ENST00000456009 SPXQ9BT56 116 aa12.8□□□□□ -0.36
CCDC144A-210ENST00000456009 PEMTQ9UBM1 199 aa12.8□□□□□ -0.36
CCDC144A-210ENST00000456009 TNFRSF18Q9Y5U5 241 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms