RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 BCE1O60756 84 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 FXYD7P58549 80 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 TFF3Q07654 80 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 FBXL19-AS1Q494R0 122 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 SPANXN5Q5MJ07 72 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 Q8N6K4 173 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 TMEM141Q96I45 108 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 IGHV5-10-1A0A0J9YXX1 117 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 ZNF815PA8K554 130 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 M0R135 149 aa3.58□□□□□ -1.84
EPHA3-202ENST00000452448 BBC3Q96PG8 261 aaPredicted RBP3.58□□□□□ -1.84
EPHA3-202ENST00000452448 SPTBN5Q9NRC6 3674 aaKnown RBP3.57□□□□□ -1.84
EPHA3-202ENST00000452448 DNAH12Q6ZR08 3092 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 DIDO1Q9BTC0 2240 aaKnown RBP3.57□□□□□ -1.84
EPHA3-202ENST00000452448 TRAV22A0A0B4J277 110 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 PINLYPA6NC86 204 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 COX6CP09669 75 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 BAALC-AS2P0C853 105 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 NANOS2P60321 138 aaKnown RBP3.57□□□□□ -1.84
EPHA3-202ENST00000452448 Q0VFX4 171 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 ODF3L2Q3SX64 289 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 C2orf83Q53S99 150 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 FAM27BQ5VT28 67 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 TMEM263Q8WUH6 116 aaKnown RBP3.57□□□□□ -1.84
EPHA3-202ENST00000452448 GVINP1Q7Z2Y8 2422 aa3.57□□□□□ -1.84
EPHA3-202ENST00000452448 ATP6V0E1O15342 81 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 IGHV3-30P01768 117 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 IGHV3-9P01782 118 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 IGHV3-30-5P0DP03 117 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 PLNP26678 52 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 SCXQ7RTU7 201 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 HTTP42858 3142 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 IGHV3OR16-10A0A075B7F0 116 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 TRGV8A0A0C4DH27 118 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 IGHV4-28A0A0C4DH34 117 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 PCNX2A6NKB5 2137 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 HCG22E2RYF7 251 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 RPL28P46779 137 aaKnown RBP3.56□□□□□ -1.84
EPHA3-202ENST00000452448 DEFB133Q30KQ1 61 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 SPTBN4Q9H254 2564 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 COL6A3P12111 3177 aa3.56□□□□□ -1.84
EPHA3-202ENST00000452448 EDDM3BP56851 147 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 C8orf49Q96NF6 230 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 IGLV3-9A0A075B6K5 115 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 IGHV3-20A0A0C4DH32 117 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 SDHAF1A6NFY7 115 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 LEPROTO15243 131 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 GNRH2O43555 120 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 NDUFA3O95167 84 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 TMEM61Q8N0U2 210 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 DEFB126Q9BYW3 111 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 RPP21Q9H633 154 aaKnown RBP3.55□□□□□ -1.84
EPHA3-202ENST00000452448 MYO7BQ6PIF6 2116 aa3.55□□□□□ -1.84
EPHA3-202ENST00000452448 ZNF826PQ6ZT77 177 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 NCOR2Q9Y618 2525 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 USP24Q9UPU5 2620 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 TRBV6-6A0A0A6YYG2 114 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 A0A0J9YY99 117 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 DNAL4O96015 105 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 ADAMTSL4-AS1Q5T5F5 129 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 FAM53AQ6NSI3 398 aaPredicted RBP3.54□□□□□ -1.84
EPHA3-202ENST00000452448 GFRA4Q9GZZ7 299 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 SND1-IT1Q9HBX3 110 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 ICOSQ9Y6W8 199 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 KIF26BQ2KJY2 2108 aa3.54□□□□□ -1.84
EPHA3-202ENST00000452448 hDV103S1A0JD37 113 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 B4DSR2 109 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 IGHV4-30-4P0DP06 118 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 PIGYQ3MUY2 71 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 KLF14Q8TD94 323 aaPredicted RBP3.53□□□□□ -1.84
EPHA3-202ENST00000452448 ZNF702PQ9H963 129 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 TMEM167BQ9NRX6 74 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 CHD6Q8TD26 2715 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 SZT2Q5T011 3432 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 RIF1Q5UIP0 2472 aaKnown RBP3.53□□□□□ -1.84
EPHA3-202ENST00000452448 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 K7EQG2 157 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 SLURP1P55000 103 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 ATP5EP2Q5VTU8 51 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 Q5VV11 94 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 TPRP12270 2363 aaKnown RBP3.53□□□□□ -1.84
EPHA3-202ENST00000452448 DSCAMO60469 2012 aa3.53□□□□□ -1.84
EPHA3-202ENST00000452448 MAP1BP46821 2468 aaKnown RBP3.52□□□□□ -1.85
EPHA3-202ENST00000452448 INAFM1C9JVW0 142 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 D6R8Y8 96 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 ZNF32P17041 273 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 GGNQ86UU5 652 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 Q8N7P7 452 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 RETNLBQ9BQ08 111 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 ADAMTS9Q9P2N4 1935 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 IGHV3OR16-13A0A075B7E8 117 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 IGHV3-13P01766 116 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 OTOGLQ3ZCN5 2332 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 SPANXN1Q5VSR9 72 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 ARHGAP32A7KAX9 2087 aa3.52□□□□□ -1.85
EPHA3-202ENST00000452448 LRCOL1A6NCL2 159 aa3.51□□□□□ -1.85
EPHA3-202ENST00000452448 C3orf84H3BNL1 204 aa3.51□□□□□ -1.85
EPHA3-202ENST00000452448 FREM3P0C091 2139 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms