RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PMCHP20382 165 aa11.99□□□□□ -0.49
PRPF40A-204ENST00000450303 CTRLP40313 264 aa11.99□□□□□ -0.49
PRPF40A-204ENST00000450303 PIK3CD-AS1Q5SR53 167 aa11.99□□□□□ -0.49
PRPF40A-204ENST00000450303 UBE2DNLQ8IWF7 75 aa11.99□□□□□ -0.49
PRPF40A-204ENST00000450303 LINC00310P59036 64 aa11.98□□□□□ -0.49
PRPF40A-204ENST00000450303 ZNF876PQ49A33 203 aa11.98□□□□□ -0.49
PRPF40A-204ENST00000450303 RNASEKQ6P5S7 137 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-204ENST00000450303 CHCHD1Q96BP2 118 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-204ENST00000450303 F5H768 121 aa11.97□□□□□ -0.49
PRPF40A-204ENST00000450303 M0R381 172 aa11.97□□□□□ -0.49
PRPF40A-204ENST00000450303 OR10AG1Q8NH19 301 aa11.97□□□□□ -0.49
PRPF40A-204ENST00000450303 RASL10AQ92737 203 aa11.97□□□□□ -0.49
PRPF40A-204ENST00000450303 MRPL16Q9NX20 251 aaKnown RBP11.97□□□□□ -0.49
PRPF40A-204ENST00000450303 MUC4Q99102 2169 aa11.96□□□□□ -0.49
PRPF40A-204ENST00000450303 IGLV2-18A0A075B6J9 118 aa11.96□□□□□ -0.49
PRPF40A-204ENST00000450303 SMIM15Q7Z3B0 74 aa11.96□□□□□ -0.49
PRPF40A-204ENST00000450303 CNFNQ9BYD5 112 aa11.96□□□□□ -0.49
PRPF40A-204ENST00000450303 TRGV2A0A075B6R0 118 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 MUC21A0A0G2JKD1 596 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 MUC21A0A140T8X8 626 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 GAGE12BA1L429 117 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 A8MWV9 139 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 GAGE7O76087 117 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 GAGE12FP0CL80 117 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 GAGE12GP0CL81 117 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 GAGE12IP0CL82 117 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 NTF3P20783 257 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 SSTP61278 116 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 TWIST1Q15672 202 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 Q6ZTI0 123 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 NACAE9PAV3 2078 aa11.95□□□□□ -0.5
PRPF40A-204ENST00000450303 CIDEAO60543 219 aa11.94□□□□□ -0.5
PRPF40A-204ENST00000450303 NXPH4O95158 308 aa11.94□□□□□ -0.5
PRPF40A-204ENST00000450303 ATP5G1P05496 136 aa11.94□□□□□ -0.5
PRPF40A-204ENST00000450303 KRTDAPP60985 99 aa11.94□□□□□ -0.5
PRPF40A-204ENST00000450303 NIT1Q86X76 327 aa11.94□□□□□ -0.5
PRPF40A-204ENST00000450303 SMIM17P0DL12 118 aa11.93□□□□□ -0.5
PRPF40A-204ENST00000450303 CDPF1Q6NVV7 123 aa11.93□□□□□ -0.5
PRPF40A-204ENST00000450303 LINC00612Q8N6U2 182 aa11.93□□□□□ -0.5
PRPF40A-204ENST00000450303 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
PRPF40A-204ENST00000450303 AP1S3Q96PC3 154 aa11.93□□□□□ -0.5
PRPF40A-204ENST00000450303 TRAV4A0A0B4J268 109 aa11.92□□□□□ -0.5
PRPF40A-204ENST00000450303 LINC00587B1AMM8 73 aa11.92□□□□□ -0.5
PRPF40A-204ENST00000450303 NUDT3O95989 172 aa11.92□□□□□ -0.5
PRPF40A-204ENST00000450303 C15orf53Q8NAA6 179 aa11.92□□□□□ -0.5
PRPF40A-204ENST00000450303 OR4C5Q8NGB2 326 aa11.92□□□□□ -0.5
PRPF40A-204ENST00000450303 RS1O15537 224 aa11.91□□□□□ -0.5
PRPF40A-204ENST00000450303 LINC00614P0C842 121 aa11.91□□□□□ -0.5
PRPF40A-204ENST00000450303 FAM104BQ5XKR9 115 aa11.91□□□□□ -0.5
PRPF40A-204ENST00000450303 FA2HQ7L5A8 372 aa11.91□□□□□ -0.5
PRPF40A-204ENST00000450303 RHODO00212 210 aa11.9□□□□□ -0.5
PRPF40A-204ENST00000450303 ORMDL3Q8N138 153 aa11.9□□□□□ -0.5
PRPF40A-204ENST00000450303 TMEM191AQ9H0A3 160 aa11.9□□□□□ -0.5
PRPF40A-204ENST00000450303 PRO1933Q9H354 126 aa11.9□□□□□ -0.5
PRPF40A-204ENST00000450303 C20orf202A1L168 122 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 RTL8CO15255 209 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 PPBPP02775 128 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 FAM19A2Q8N3H0 131 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 PRSS3P2Q8NHM4 247 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 VAMP8Q9BV40 100 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 DPH3P1Q9H4G8 78 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
PRPF40A-204ENST00000450303 DDTP30046 118 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 PMCHL1Q16048 86 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 FAM74A4Q5TZK3 123 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 CFAP126Q5VTH2 177 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 ZFP2Q6ZN57 461 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 TEX43Q6ZNM6 134 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 LINC00336Q6ZUF6 198 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 C14orf178Q8N769 122 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 LAMTOR2Q9Y2Q5 125 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 DNAH17Q9UFH2 4485 aa11.88□□□□□ -0.51
PRPF40A-204ENST00000450303 DNAH2Q9P225 4427 aa11.87□□□□□ -0.51
PRPF40A-204ENST00000450303 TRGV4A0A0C4DH28 118 aa11.87□□□□□ -0.51
PRPF40A-204ENST00000450303 BTF3P20290 206 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-204ENST00000450303 Q6ZR54 194 aa11.87□□□□□ -0.51
PRPF40A-204ENST00000450303 ZNF664Q8N3J9 261 aa11.87□□□□□ -0.51
PRPF40A-204ENST00000450303 JPT2Q9H910 190 aa11.87□□□□□ -0.51
PRPF40A-204ENST00000450303 A0A087WWL8 130 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 A0A0J9YY99 117 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 IGHV3-53P01767 116 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 C3orf79P0CE67 100 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 EVI2AP22794 236 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 CKS2P33552 79 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 MRPL51Q4U2R6 128 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 AMN1Q8IY45 258 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 ZNF479Q96JC4 524 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 AP5S1Q9NUS5 200 aa11.86□□□□□ -0.51
PRPF40A-204ENST00000450303 TRAV26-1A0A087WT03 109 aa11.85□□□□□ -0.51
PRPF40A-204ENST00000450303 D6R8Y8 96 aa11.85□□□□□ -0.51
PRPF40A-204ENST00000450303 F5H697 171 aa11.85□□□□□ -0.51
PRPF40A-204ENST00000450303 LEPROTL1O95214 131 aa11.85□□□□□ -0.51
PRPF40A-204ENST00000450303 CRYGDP07320 174 aa11.85□□□□□ -0.51
PRPF40A-204ENST00000450303 MGPP08493 103 aa11.85□□□□□ -0.51
PRPF40A-204ENST00000450303 ZNF56Q15929 161 aa11.84□□□□□ -0.51
PRPF40A-204ENST00000450303 TMEM70Q9BUB7 260 aa11.84□□□□□ -0.51
PRPF40A-204ENST00000450303 MAP1LC3AQ9H492 121 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 508.4 ms