RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 RGS21Q2M5E4 152 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 HSD17B12Q53GQ0 312 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 CFAP126Q5VTH2 177 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 SNX29P2Q8IUI4 249 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 DYNLRB2Q8TF09 96 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 C10orf82Q8WW14 230 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 CEP19Q96LK0 163 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 SLC35B3Q9H1N7 401 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 METTL1Q9UBP6 276 aaKnown RBP-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 MED31Q9Y3C7 131 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 UFC1Q9Y3C8 167 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 ERCC6L2Q5T890 1561 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 LYSTQ99698 3801 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 CELSR3Q9NYQ7 3312 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 TRBV6-1A0A0K0K1D8 114 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 J3KT08 172 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 M0R2P5 195 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 UQCRQO14949 82 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 NPFFO15130 113 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 PIN1P1O15428 100 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 RPL22P35268 128 aaKnown RBP-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 DCDP81605 110 aaKnown RBP-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 REEP5Q00765 189 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 PLGLB1Q02325 96 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 C9orf116Q5BN46 136 aaPredicted RBP-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 DCUN1D2Q6PH85 259 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 HOPXQ9BPY8 73 aaPredicted RBP-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 LXNQ9BS40 222 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 AGPAT4-IT1Q9H0P7 198 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 TAS2R8Q9NYW2 309 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 DNAJC15Q9Y5T4 150 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 VPS13BQ7Z7G8 4022 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 A2MP01023 1474 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 PAPPAQ13219 1627 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 KDM3BQ7LBC6 1761 aa-0.76□□□□□ -2.53
SNHG3-203ENST00000447507 PARP14Q460N5 1801 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 WNK3Q9BYP7 1800 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 ZNF609O15014 1411 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 FAM92AA1XBS5 289 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 APOC4-APOC2K7ER74 178 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 MT-ND4LP03901 98 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 S100A6P06703 90 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 SRP9P49458 86 aaKnown RBP-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 POLR2HP52434 150 aaKnown RBP-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 STX12Q86Y82 276 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 SDF2Q99470 211 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 VPS25Q9BRG1 176 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 SCP2D1Q9UJQ7 156 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 LAMTOR2Q9Y2Q5 125 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 NOP16Q9Y3C1 178 aaKnown RBP-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 DNAH9Q9NYC9 4486 aa-0.77□□□□□ -2.53
SNHG3-203ENST00000447507 DOCK1Q14185 1865 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 ZNF236Q9UL36 1845 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 WDR7Q9Y4E6 1490 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 MED23Q9ULK4 1368 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 URB1O60287 2271 aaKnown RBP-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 PNMA8CA0A1B0GUJ8 204 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 A0A1W2PRE2 83 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 COX6B1P14854 86 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 UBE2D1P51668 147 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 CLLU1Q5K131 121 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 TMEM91Q6ZNR0 172 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 NDUFA11Q86Y39 141 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 THEM6Q8WUY1 208 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 NDUFA12Q9UI09 145 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 ERG28Q9UKR5 140 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 LSM2Q9Y333 95 aaKnown RBP-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 CUBNO60494 3623 aa-0.78□□□□□ -2.53
SNHG3-203ENST00000447507 KIAA0100Q14667 2235 aaKnown RBP-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 ERCC6Q03468 1493 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 TRAV2A0A0B4J234 112 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 E7EQ34 232 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 PITX3O75364 302 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 HIST1H1BP16401 226 aaKnown RBP-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 SERPINB1P30740 379 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 TCTAP57738 103 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 LSM3P62310 102 aaKnown RBP-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 MRPS15P82914 257 aaKnown RBP-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 TMEM78Q5T7P6 136 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 LINC01545Q5VT33 79 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 Q5VV11 94 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 BAGE3Q86Y29 109 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 DEFB105AQ8NG35 78 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 ATP6V0E2Q8NHE4 81 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 CCDC32Q9BV29 185 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 BANF2Q9H503 90 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 PARVGQ9HBI0 331 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 KDM5AP29375 1690 aaKnown RBP-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 DNHD1Q96M86 4753 aa-0.79□□□□□ -2.54
SNHG3-203ENST00000447507 YTHDC2Q9H6S0 1430 aaKnown RBP-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 J3QLW9 94 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 M0R129 80 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 PGRMC1O00264 195 aaKnown RBP-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 PSPHP78330 225 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 DEFB135Q30KP9 77 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 PIGYQ3MUY2 71 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 CCDC115Q96NT0 180 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 SPRR2FQ96RM1 72 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 GID8Q9NWU2 228 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 DNAH2Q9P225 4427 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms