RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 IMMP2LQ96T52 175 aa12.35□□□□□ -0.43
CIRBP-203ENST00000444172 TNFRSF18Q9Y5U5 241 aa12.35□□□□□ -0.43
CIRBP-203ENST00000444172 RAB4AP20338 218 aa12.34□□□□□ -0.43
CIRBP-203ENST00000444172 S100PP25815 95 aa12.34□□□□□ -0.43
CIRBP-203ENST00000444172 RNF185Q96GF1 192 aa12.34□□□□□ -0.43
CIRBP-203ENST00000444172 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
CIRBP-203ENST00000444172 A0A087WWC5 75 aa12.33□□□□□ -0.44
CIRBP-203ENST00000444172 A0A1B0GXF2 115 aa12.33□□□□□ -0.44
CIRBP-203ENST00000444172 LINC00694P0DN24 101 aa12.33□□□□□ -0.44
CIRBP-203ENST00000444172 ATP5L2Q7Z4Y8 100 aa12.33□□□□□ -0.44
CIRBP-203ENST00000444172 DNAJC30Q96LL9 226 aa12.33□□□□□ -0.44
CIRBP-203ENST00000444172 GTSF1LQ9H1H1 148 aa12.33□□□□□ -0.44
CIRBP-203ENST00000444172 TMEM242Q9NWH2 141 aa12.33□□□□□ -0.44
CIRBP-203ENST00000444172 MRPS16Q9Y3D3 137 aaKnown RBP12.33□□□□□ -0.44
CIRBP-203ENST00000444172 URGCP-MRPS24S4R325 110 aa12.33□□□□□ -0.44
CIRBP-203ENST00000444172 IGHV3-38A0A0C4DH36 116 aa12.32□□□□□ -0.44
CIRBP-203ENST00000444172 UBE2D3P61077 147 aa12.32□□□□□ -0.44
CIRBP-203ENST00000444172 UBE2D2P62837 147 aa12.32□□□□□ -0.44
CIRBP-203ENST00000444172 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.32□□□□□ -0.44
CIRBP-203ENST00000444172 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
CIRBP-203ENST00000444172 ALMS1Q8TCU4 4167 aa12.32□□□□□ -0.44
CIRBP-203ENST00000444172 IGLV2-18A0A075B6J9 118 aa12.31□□□□□ -0.44
CIRBP-203ENST00000444172 RPL39LQ96EH5 51 aaKnown RBP12.31□□□□□ -0.44
CIRBP-203ENST00000444172 LYSTQ99698 3801 aa12.3□□□□□ -0.44
CIRBP-203ENST00000444172 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
CIRBP-203ENST00000444172 FAM104BQ5XKR9 115 aa12.3□□□□□ -0.44
CIRBP-203ENST00000444172 Q9H8V8 135 aa12.3□□□□□ -0.44
CIRBP-203ENST00000444172 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
CIRBP-203ENST00000444172 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
CIRBP-203ENST00000444172 TIRAPP58753 221 aa12.29□□□□□ -0.44
CIRBP-203ENST00000444172 MRPL51Q4U2R6 128 aaKnown RBP12.29□□□□□ -0.44
CIRBP-203ENST00000444172 FRZBQ92765 325 aa12.29□□□□□ -0.44
CIRBP-203ENST00000444172 MRAP2Q96G30 205 aa12.29□□□□□ -0.44
CIRBP-203ENST00000444172 UPK3BQ9BT76 320 aa12.29□□□□□ -0.44
CIRBP-203ENST00000444172 TRAV9-1A0A075B6T8 112 aa12.28□□□□□ -0.44
CIRBP-203ENST00000444172 TRAV8-6A0A0B4J262 113 aa12.28□□□□□ -0.44
CIRBP-203ENST00000444172 M0R2N4 97 aa12.28□□□□□ -0.44
CIRBP-203ENST00000444172 NCR2O95944 276 aa12.28□□□□□ -0.44
CIRBP-203ENST00000444172 LELP1Q5T871 98 aa12.28□□□□□ -0.44
CIRBP-203ENST00000444172 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
CIRBP-203ENST00000444172 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
CIRBP-203ENST00000444172 WFDC10BQ8IUB3 73 aa12.27□□□□□ -0.45
CIRBP-203ENST00000444172 SIVA1O15304 175 aa12.26□□□□□ -0.45
CIRBP-203ENST00000444172 CKS2P33552 79 aa12.26□□□□□ -0.45
CIRBP-203ENST00000444172 ATRAIDQ6UW56 229 aa12.26□□□□□ -0.45
CIRBP-203ENST00000444172 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
CIRBP-203ENST00000444172 RPS10P46783 165 aaKnown RBP12.25□□□□□ -0.45
CIRBP-203ENST00000444172 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
CIRBP-203ENST00000444172 D6R8Y8 96 aa12.24□□□□□ -0.45
CIRBP-203ENST00000444172 DNAH1Q9P2D7 4330 aa12.23□□□□□ -0.45
CIRBP-203ENST00000444172 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
CIRBP-203ENST00000444172 PPP1R17O96001 155 aa12.23□□□□□ -0.45
CIRBP-203ENST00000444172 TMEM97Q5BJF2 176 aa12.23□□□□□ -0.45
CIRBP-203ENST00000444172 TMEM136Q6ZRR5 245 aa12.23□□□□□ -0.45
CIRBP-203ENST00000444172 VPS13DQ5THJ4 4388 aa12.22□□□□□ -0.45
CIRBP-203ENST00000444172 TRBV6-8A0A0A6YYG3 113 aa12.22□□□□□ -0.45
CIRBP-203ENST00000444172 TGIF2-C20orf24A0A0A6YYL0 155 aa12.22□□□□□ -0.45
CIRBP-203ENST00000444172 TRBV6-5A0A0K0K1A5 114 aa12.22□□□□□ -0.45
CIRBP-203ENST00000444172 NBDYA0A0U1RRE5 68 aa12.22□□□□□ -0.45
CIRBP-203ENST00000444172 PMCHP20382 165 aa12.22□□□□□ -0.45
CIRBP-203ENST00000444172 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 IGHV3-33P01772 117 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 IGHV3-30-3P0DP02 117 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 COTL1Q14019 142 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 ELOBQ15370 118 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 ORMDL3Q8N138 153 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 NRACQ8N912 160 aa12.21□□□□□ -0.45
CIRBP-203ENST00000444172 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
CIRBP-203ENST00000444172 PPBPP02775 128 aa12.2□□□□□ -0.46
CIRBP-203ENST00000444172 COX19Q49B96 90 aa12.2□□□□□ -0.46
CIRBP-203ENST00000444172 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 I3L3M4 83 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 APCSP02743 223 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 SUMO2P61956 95 aaKnown RBP12.19□□□□□ -0.46
CIRBP-203ENST00000444172 PRELID3AQ96N28 172 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 TMEM70Q9BUB7 260 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 SACSQ9NZJ4 4579 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 HYDINQ4G0P3 5121 aa12.19□□□□□ -0.46
CIRBP-203ENST00000444172 KMT2CQ8NEZ4 4911 aaKnown RBP12.18□□□□□ -0.46
CIRBP-203ENST00000444172 TRAV9-2A0A087WT02 112 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 NPYP01303 97 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 DNAH10OSP0CZ25 163 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 AMTP48728 403 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 POLR2KP53803 58 aaKnown RBP12.18□□□□□ -0.46
CIRBP-203ENST00000444172 KIAA1644Q3SXP7 199 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 TTC32Q5I0X7 151 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 GNB1LQ9BYB4 327 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 SMCO4Q9NRQ5 59 aa12.18□□□□□ -0.46
CIRBP-203ENST00000444172 TRBV24-1A0A075B6N3 115 aa12.17□□□□□ -0.46
CIRBP-203ENST00000444172 VCYO14598 125 aa12.17□□□□□ -0.46
CIRBP-203ENST00000444172 LINC01556Q5JQF7 62 aa12.17□□□□□ -0.46
CIRBP-203ENST00000444172 Q6ZR54 194 aa12.17□□□□□ -0.46
CIRBP-203ENST00000444172 NIT1Q86X76 327 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms