RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 Q71RC1 249 aaPredicted RBP2.05□□□□□ -2.08
LINC00393-201ENST00000443621 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 C1orf158Q8N1D5 194 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 FAM19A2Q8N3H0 131 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF664Q8N3J9 261 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 C14orf178Q8N769 122 aaPredicted RBP2.05□□□□□ -2.08
LINC00393-201ENST00000443621 Q8N976 141 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 DUX3Q96PT4 197 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 SMR3AQ99954 134 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 MIEN1Q9BRT3 115 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 TMEM208Q9BTX3 173 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 C1orf43Q9BWL3 253 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 PPDPFQ9H3Y8 114 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 SPANXA1Q9NS26 97 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 MDFICQ9P1T7 246 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 UQCR10Q9UDW1 63 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 CYSLTR1Q9Y271 337 aa2.05□□□□□ -2.08
LINC00393-201ENST00000443621 MRPS16Q9Y3D3 137 aaKnown RBP2.05□□□□□ -2.08
LINC00393-201ENST00000443621 TRBV7-3A0A075B6L6 115 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 TRAV12-2A0A075B6T6 113 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 TRAV26-1A0A087WT03 109 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 A0A087WX48 190 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 RBMY1BA6NDE4 496 aaKnown RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 RBMY1EA6NEQ0 496 aaKnown RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 IGIPA6NJ69 53 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 KNCNA6PVL3 124 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 DPM2O94777 84 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 NUDT3O95989 172 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 GHRHP01286 108 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 IGKCP01834 107 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 GIG44P09565 113 aaPredicted RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 RBMY1DP0C7P1 496 aaKnown RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 RBMY1A1P0DJD3 496 aaKnown RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 RBMY1CP0DJD4 496 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 IGLC3P0DOY3 106 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 AZU1P20160 251 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 EDN2P20800 178 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 GCSHP23434 173 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 KRTAP10-3P60369 221 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 KRTDAPP60985 99 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 RPL36AP83881 106 aaKnown RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 DEFA6Q01524 100 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 PMVKQ15126 192 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 RBMY1FQ15415 496 aaKnown RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 TAL2Q16559 108 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 SUMO4Q6EEV6 95 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 NIPBLQ6KC79 2804 aaeCLIP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 C12orf54Q6X4T0 127 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 Q6ZN92 141 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 SETXQ7Z333 2677 aaKnown RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 NFE4Q86UQ8 179 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 C20orf203Q8NBC4 194 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 NEXN-AS1Q8NBZ9 246 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 OR4C5Q8NGB2 326 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 RPL36ALQ969Q0 106 aaKnown RBP2.04□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF479Q96JC4 524 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 HIGD1BQ9P298 99 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 HECTD1Q9ULT8 2610 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 HHLA3Q9XRX5 114 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 TNFRSF18Q9Y5U5 241 aa2.04□□□□□ -2.08
LINC00393-201ENST00000443621 ACANP16112 2415 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 TEP1Q99973 2627 aaKnown RBP2.03□□□□□ -2.08
LINC00393-201ENST00000443621 LOC389332A0A1B0GUA5 103 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 A0A1B0GUV1 79 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 PLAC8L1A1L4L8 177 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 C11orf86A6NJI1 115 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 F5H697 171 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 M0R143 59 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 PRSS1P07477 247 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 COX8AP10176 69 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 GATA1P15976 413 aaPredicted RBP2.03□□□□□ -2.08
LINC00393-201ENST00000443621 TIRAPP58753 221 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 DEFB1P60022 68 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 ZNF56Q15929 161 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 SPATA45Q537H7 98 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 SLC25A34Q6PIV7 304 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 SFTA2Q6UW10 78 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 C2orf66Q6UXQ4 117 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 Q6ZQT7 251 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 Q6ZVH6 145 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 LINC01561Q8N1V8 128 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 C3orf56Q8N813 242 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 RNF183Q96D59 192 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 SCGB3A1Q96QR1 104 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 AMELXQ99217 191 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 C2orf88Q9BSF0 95 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 PRADC1Q9BSG0 188 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 CHCHD7Q9BUK0 85 aa2.03□□□□□ -2.08
LINC00393-201ENST00000443621 C11orf68Q9H3H3 251 aaKnown RBP2.03□□□□□ -2.08
LINC00393-201ENST00000443621 SONP18583 2426 aaKnown RBP2.03□□□□□ -2.08
LINC00393-201ENST00000443621 MTORP42345 2549 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 FN1P02751 2386 aaKnown RBP2.02□□□□□ -2.09
LINC00393-201ENST00000443621 SORL1Q92673 2214 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 NACAE9PAV3 2078 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 TRAV26-2A0A0B4J265 109 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 A0A1W2PRX2 142 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 LINC00587B1AMM8 73 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 E9PLD3 99 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 SMKR1H3BMG3 65 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms