RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SEC11AP67812 179 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 TMEM97Q5BJF2 176 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 C9orf47Q6ZRZ4 202 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 ERASQ7Z444 233 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 PCP2Q8IVA1 136 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 KIR2DL5BQ8NHK3 375 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 MRPL53Q96EL3 112 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 HIGD1BQ9P298 99 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 TRGV1A0A0A0MS02 117 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 DEFB1P60022 68 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 ERCC8Q13216 396 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 OR8A1Q8NGG7 326 aa5.43□□□□□ -1.54
CDC42BPA-208ENST00000442054 TRGV4A0A0C4DH28 118 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 F5H697 171 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 SMIM17P0DL12 118 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 FER1L6-AS1Q8NA97 138 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 K7EQG2 157 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 GATA1P15976 413 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 ODF3L2Q3SX64 289 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 OCIAD2Q56VL3 154 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 RNF183Q96D59 192 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 AGPAT4-IT1Q9H0P7 198 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 FCER1GP30273 86 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 CACNG7P62955 275 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 EGFEM1PQ0D2K5 195 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 C20orf173Q96LM9 149 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 MUC4Q99102 2169 aa5.42□□□□□ -1.54
CDC42BPA-208ENST00000442054 IGHV3-53P01767 116 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 SMIM15Q7Z3B0 74 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 IFI27L1Q96BM0 104 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 TMSB15BA0A087X1C1 80 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 GAGE12BA1L429 117 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 C7orf71A4D174 169 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 GAGE7O76087 117 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 GAGE12FP0CL80 117 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 GAGE12GP0CL81 117 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 GAGE12IP0CL82 117 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 PGPEP1Q9NXJ5 209 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 TM2D2Q9BX73 214 aa5.41□□□□□ -1.54
CDC42BPA-208ENST00000442054 DEFB131BA0A096LNP1 70 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 TEX48A0A1B0GUV7 120 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 NXPH4O95158 308 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 FA2HQ7L5A8 372 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 Q8N8P6 123 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 PRSS3P2Q8NHM4 247 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 LOC389332A0A1B0GUA5 103 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 A0A1B0GWB2 263 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 NUPR2A6NF83 97 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 K7EP34 96 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 LINC00315P59091 139 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 HSD52Q0P140 79 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 LINC00477Q96M19 166 aa5.4□□□□□ -1.54
CDC42BPA-208ENST00000442054 MIFP14174 115 aa5.4□□□□□ -1.55
CDC42BPA-208ENST00000442054 NANOS2P60321 138 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-208ENST00000442054 ZFAND2AQ8N6M9 145 aa5.4□□□□□ -1.55
CDC42BPA-208ENST00000442054 FABP5P3A8MUU1 101 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 MAPKAPK5-AS1Q8N8E1 139 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 KIF25-AS1Q9Y6Z4 181 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 C3orf84H3BNL1 204 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 ZNF415Q09FC8 603 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 SPXQ9BT56 116 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 ANK3Q12955 4377 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 H3BMM0 161 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 FXYD2P54710 66 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 CCL18P55774 89 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 TWIST1Q15672 202 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 TTTY13Q9BZ97 58 aa5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRAV2A0A0B4J234 112 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 RBMY1BA6NDE4 496 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 RBMY1EA6NEQ0 496 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 RBMY1DP0C7P1 496 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 FBN1P35555 2871 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 IGHV4-28A0A0C4DH34 117 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 A0A0J9YY99 117 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 ATP5G1P05496 136 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 CKS2P33552 79 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 FAM74A4Q5TZK3 123 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 ZNF479Q96JC4 524 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 NXT2Q9NPJ8 142 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRBV7-3A0A075B6L6 115 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRAV10A0A0B4J240 114 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 A0A1W2PPM0 123 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 FAM222AQ5U5X8 452 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 OR4C5Q8NGB2 326 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 RASL10AQ92737 203 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 PHLDA3Q9Y5J5 127 aa5.38□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRGV11A0A075B6L2 103 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRAV12-1A0A0B4J245 112 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRAV21A0A0B4J279 112 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 Q8N1Y9 231 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 SYT8Q8NBV8 401 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 LENEPQ9Y5L5 61 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 TRBV25-1A0A075B6N4 114 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 A0A0J9YX75 114 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 CRYGDP07320 174 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 H0Y8G0 127 aa5.37□□□□□ -1.55
CDC42BPA-208ENST00000442054 TSHBP01222 138 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms