RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 KRTAP24-1Q3LI83 254 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
VPS50-205ENST00000441602 A0A087WX48 190 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 IGLL1P15814 213 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 HERVK_113P61574 105 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 LBHQ53QV2 105 aaPredicted RBP4.36□□□□□ -1.71
VPS50-205ENST00000441602 IL17DQ8TAD2 202 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 OVOL2Q9BRP0 275 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 PRADC1Q9BSG0 188 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 NOP10Q9NPE3 64 aaKnown RBP4.36□□□□□ -1.71
VPS50-205ENST00000441602 TP53TG1Q9Y2A0 90 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 AGRNO00468 2067 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 FN1P02751 2386 aaKnown RBP4.36□□□□□ -1.71
VPS50-205ENST00000441602 WNK1Q9H4A3 2382 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 TRGV4A0A0C4DH28 118 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 M0R143 59 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 WIPF1O43516 503 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 IGLC3P0DOY3 106 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 CHTOPQ9Y3Y2 248 aaKnown RBP4.36□□□□□ -1.71
VPS50-205ENST00000441602 SORL1Q92673 2214 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 GAGE12BA1L429 117 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 K7EQD1 137 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 GAGE7O76087 117 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 NPSP0C0P6 89 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 GAGE12FP0CL80 117 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 GAGE12GP0CL81 117 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 GAGE12IP0CL82 117 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 TMEM97Q5BJF2 176 aa4.36□□□□□ -1.71
VPS50-205ENST00000441602 GCN1Q92616 2671 aaKnown RBP4.35□□□□□ -1.71
VPS50-205ENST00000441602 TEX48A0A1B0GUV7 120 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 F8VRH5 84 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 ODF1Q14990 250 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 NEGR1Q7Z3B1 354 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 TACC2O95359 2948 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 CELSR2Q9HCU4 2923 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 hDV102S1A0JD36 115 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 LYRM9A8MSI8 78 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 PMVKQ15126 192 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 UFSP1Q6NVU6 142 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 Q6ZTI0 123 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 SPANXA1Q9NS26 97 aa4.35□□□□□ -1.71
VPS50-205ENST00000441602 GIG44P09565 113 aaPredicted RBP4.34□□□□□ -1.71
VPS50-205ENST00000441602 CRYBA4P53673 196 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 DAZ4Q86SG3 579 aaKnown RBP4.34□□□□□ -1.71
VPS50-205ENST00000441602 C20orf203Q8NBC4 194 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 NEXN-AS1Q8NBZ9 246 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 DAZ3Q9NR90 486 aaKnown RBP4.34□□□□□ -1.71
VPS50-205ENST00000441602 ITPR2Q14571 2701 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 C2CD3Q4AC94 2353 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 SMG1Q96Q15 3661 aaKnown RBP4.34□□□□□ -1.71
VPS50-205ENST00000441602 TSHBP01222 138 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 ZMAT4Q9H898 229 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 MRPS16Q9Y3D3 137 aaKnown RBP4.34□□□□□ -1.71
VPS50-205ENST00000441602 MUC4Q99102 2169 aa4.34□□□□□ -1.71
VPS50-205ENST00000441602 TRBV6-4A0A1B0GX49 114 aa4.34□□□□□ -1.72
VPS50-205ENST00000441602 MIFP14174 115 aa4.34□□□□□ -1.72
VPS50-205ENST00000441602 EMP1P54849 157 aa4.34□□□□□ -1.72
VPS50-205ENST00000441602 C14orf144Q96I85 54 aa4.34□□□□□ -1.72
VPS50-205ENST00000441602 VCX2Q9H322 139 aa4.34□□□□□ -1.72
VPS50-205ENST00000441602 F8P00451 2351 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 TRBV7-3A0A075B6L6 115 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 PRM2P04554 102 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 COX8AP10176 69 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 ZNRF2Q8NHG8 242 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 BAALCQ8WXS3 180 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 C2orf88Q9BSF0 95 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 MRPL35Q9NZE8 188 aaKnown RBP4.33□□□□□ -1.72
VPS50-205ENST00000441602 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 ZNF479Q96JC4 524 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 ZANQ9Y493 2812 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 CRYBG3Q68DQ2 2970 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 PRSS29PA6NIE9 313 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 DLEU1O43261 78 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 NMUP48645 174 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 OR11H2Q8NH07 326 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 TIMM21Q9BVV7 248 aa4.33□□□□□ -1.72
VPS50-205ENST00000441602 GAGE12JA6NER3 117 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 UBE2L6O14933 153 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 CTAG1AP78358 180 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 GAGE1Q13065 139 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 GAGE4Q13068 117 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 GAGE5Q13069 117 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 GAGE13Q4V321 117 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 AMMECR1LQ6DCA0 310 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 PHLDA1Q8WV24 401 aaPredicted RBP4.32□□□□□ -1.72
VPS50-205ENST00000441602 IGIPA6NJ69 53 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 SIVA1O15304 175 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 DEFB130BP0DP73 79 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 DEFB130AP0DP74 79 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 DAD1P61803 113 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 DEFB135Q30KP9 77 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 MAJINQ3KP22 176 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 TMEM101Q96IK0 257 aa4.32□□□□□ -1.72
VPS50-205ENST00000441602 SPART-AS1P0CW21 52 aa4.31□□□□□ -1.72
VPS50-205ENST00000441602 P0DMU3 169 aa4.31□□□□□ -1.72
VPS50-205ENST00000441602 FAM231AP0DMU4 169 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms