RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ZNF580Q9UK33 172 aa15.18■□□□□ 0.02
SHOX2-203ENST00000441443 MINOS1-NBL1R4GNA1 71 aa15.18■□□□□ 0.02
SHOX2-203ENST00000441443 CREBBPQ92793 2442 aa15.18■□□□□ 0.02
SHOX2-203ENST00000441443 VCYO14598 125 aa15.18■□□□□ 0.02
SHOX2-203ENST00000441443 LINC01620Q4KN68 170 aa15.18■□□□□ 0.02
SHOX2-203ENST00000441443 FAM74A4Q5TZK3 123 aa15.18■□□□□ 0.02
SHOX2-203ENST00000441443 TIMM17AQ99595 171 aa15.18■□□□□ 0.02
SHOX2-203ENST00000441443 TRBV12-3P01733 135 aa15.17■□□□□ 0.02
SHOX2-203ENST00000441443 SAA4P35542 130 aa15.17■□□□□ 0.02
SHOX2-203ENST00000441443 TMEM219Q86XT9 240 aa15.17■□□□□ 0.02
SHOX2-203ENST00000441443 ODF3Q96PU9 254 aa15.17■□□□□ 0.02
SHOX2-203ENST00000441443 IGHV4OR15-8A0A075B7B6 117 aa15.16■□□□□ 0.02
SHOX2-203ENST00000441443 A0A087WW49 117 aa15.16■□□□□ 0.02
SHOX2-203ENST00000441443 ADARB2-AS1A8MUL3 147 aa15.16■□□□□ 0.02
SHOX2-203ENST00000441443 OVOL1O14753 267 aa15.16■□□□□ 0.02
SHOX2-203ENST00000441443 ATXN8Q156A1 80 aa15.16■□□□□ 0.02
SHOX2-203ENST00000441443 C15orf53Q8NAA6 179 aa15.16■□□□□ 0.02
SHOX2-203ENST00000441443 TRAV8-4A0A0B4J246 113 aa15.15■□□□□ 0.02
SHOX2-203ENST00000441443 ABCA2Q9BZC7 2435 aa15.15■□□□□ 0.02
SHOX2-203ENST00000441443 MED14OSP0DP75 135 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 A0A0B4J2C4 111 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 P0DMU3 169 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 FAM231AP0DMU4 169 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 FAM231CP0DMU5 169 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 POM121L12Q8N7R1 296 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 SIRPDQ9H106 197 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 TMEM223A0PJW6 202 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 FAM159AQ6UWV7 190 aa15.14■□□□□ 0.01
SHOX2-203ENST00000441443 DOPEY1Q5JWR5 2465 aa15.13■□□□□ 0.01
SHOX2-203ENST00000441443 SOCS3O14543 225 aa15.13■□□□□ 0.01
SHOX2-203ENST00000441443 LEPROTO15243 131 aa15.13■□□□□ 0.01
SHOX2-203ENST00000441443 SMIM20Q8N5G0 67 aa15.13■□□□□ 0.01
SHOX2-203ENST00000441443 CSMD2Q7Z408 3487 aa15.13■□□□□ 0.01
SHOX2-203ENST00000441443 M0QXV9 152 aa15.13■□□□□ 0.01
SHOX2-203ENST00000441443 TRIAP1O43715 76 aa15.13■□□□□ 0.01
SHOX2-203ENST00000441443 BRD3OSQ6XYD6 125 aa15.13■□□□□ 0.01
SHOX2-203ENST00000441443 ABCA12Q86UK0 2595 aa15.12■□□□□ 0.01
SHOX2-203ENST00000441443 TRBV7-9A0A0J9YWB2 115 aa15.11■□□□□ 0.01
SHOX2-203ENST00000441443 RPL32P62910 135 aaKnown RBP15.11■□□□□ 0.01
SHOX2-203ENST00000441443 KLK9Q2XQG4 91 aa15.11■□□□□ 0.01
SHOX2-203ENST00000441443 FAM19A4Q96LR4 140 aa15.11■□□□□ 0.01
SHOX2-203ENST00000441443 KLK9Q9UKQ9 250 aa15.11■□□□□ 0.01
SHOX2-203ENST00000441443 A0A0J9YXV3 536 aa15.11■□□□□ 0.01
SHOX2-203ENST00000441443 PTPN13Q12923 2485 aa15.11■□□□□ 0.01
SHOX2-203ENST00000441443 PRSS2P07478 247 aa15.11■□□□□ 0.01
SHOX2-203ENST00000441443 ZNF22P17026 224 aaPredicted RBP15.11■□□□□ 0.01
SHOX2-203ENST00000441443 SHISA2Q6UWI4 295 aa15.11■□□□□ 0.01
SHOX2-203ENST00000441443 TLN2Q9Y4G6 2542 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 H3BMM0 161 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 NXPH4O95158 308 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 LMO4P61968 165 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 UBE2WQ96B02 151 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 ZANQ9Y493 2812 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 ZNF462Q96JM2 2506 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 TRBV27A0A0K0K1C4 114 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 TRBV10-2A0A0K0K1G8 114 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 HERV-K104P63124 156 aa15.1■□□□□ 0.01
SHOX2-203ENST00000441443 IGHV3-11P01762 117 aa15.09■□□□□ 0.01
SHOX2-203ENST00000441443 C2orf82Q6UX34 121 aa15.09■□□□□ 0.01
SHOX2-203ENST00000441443 Q6ZSV7 163 aa15.09■□□□□ 0.01
SHOX2-203ENST00000441443 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.09■□□□□ 0.01
SHOX2-203ENST00000441443 TRAV12-3A0A0B4J271 114 aa15.09■□□□□ 0.01
SHOX2-203ENST00000441443 UBE2E1P51965 193 aa15.09■□□□□ 0.01
SHOX2-203ENST00000441443 A0A0J9YXY3 114 aa15.08■□□□□ 0
SHOX2-203ENST00000441443 NPC2P61916 151 aa15.08■□□□□ 0
SHOX2-203ENST00000441443 ZNF56Q15929 161 aa15.08■□□□□ 0
SHOX2-203ENST00000441443 SPXQ9BT56 116 aa15.08■□□□□ 0
SHOX2-203ENST00000441443 RPL13AP40429 203 aaKnown RBP15.08■□□□□ 0
SHOX2-203ENST00000441443 TRAV41A0A0B4J266 112 aa15.07■□□□□ 0
SHOX2-203ENST00000441443 M0R2P5 195 aa15.07■□□□□ 0
SHOX2-203ENST00000441443 C5orf56Q8N8D9 126 aa15.07■□□□□ 0
SHOX2-203ENST00000441443 LGALS9O00182 355 aa15.06■□□□□ 0
SHOX2-203ENST00000441443 APRG1Q8IVJ8 170 aa15.06■□□□□ 0
SHOX2-203ENST00000441443 NPFFO15130 113 aa15.06■□□□□ 0
SHOX2-203ENST00000441443 LY6EQ16553 131 aa15.06■□□□□ 0
SHOX2-203ENST00000441443 Q6Q795 121 aa15.06■□□□□ 0
SHOX2-203ENST00000441443 DUX3Q96PT4 197 aa15.06■□□□□ 0
SHOX2-203ENST00000441443 TRBV30A0A0K0K1B3 111 aa15.05■□□□□ 0
SHOX2-203ENST00000441443 H7C423 109 aa15.05■□□□□ 0
SHOX2-203ENST00000441443 C3orf56Q8N813 242 aa15.05■□□□□ 0
SHOX2-203ENST00000441443 CLEC2BQ92478 149 aa15.05■□□□□ 0
SHOX2-203ENST00000441443 PRORYQ9H606 182 aa15.05■□□□□ -0
SHOX2-203ENST00000441443 EPG5Q9HCE0 2579 aa15.05■□□□□ -0
SHOX2-203ENST00000441443 TRAV8-3A0A0A6YYJ7 113 aa15.04■□□□□ -0
SHOX2-203ENST00000441443 MDFICQ9P1T7 246 aa15.04■□□□□ -0
SHOX2-203ENST00000441443 IGHV1-69P01742 117 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 IGHV3-30-3P0DP02 117 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 EDN2P20800 178 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 M0QY20 66 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 ADAMTSL4-AS1Q5T5F5 129 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 ICOSQ9Y6W8 199 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 ANKRD17O75179 2603 aaKnown RBP15.03■□□□□ -0
SHOX2-203ENST00000441443 IGKV3-20P01619 116 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 MEIG1Q5JSS6 88 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 RHPN1-AS1Q9BWJ2 59 aa15.03■□□□□ -0
SHOX2-203ENST00000441443 TRBV6-5A0A0K0K1A5 114 aa15.02■□□□□ -0
SHOX2-203ENST00000441443 KLLNB2CW77 178 aa15.02■□□□□ -0
SHOX2-203ENST00000441443 NDUFA4O00483 81 aa15.02■□□□□ -0
SHOX2-203ENST00000441443 CHCHD5Q9BSY4 110 aa15.02■□□□□ -0
SHOX2-203ENST00000441443 PRRC2AP48634 2157 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms