RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 LRP1BQ9NZR2 4599 aa15.86■□□□□ 0.13
VARS-217ENST00000440048 GTSF1Q8WW33 167 aa15.86■□□□□ 0.13
VARS-217ENST00000440048 A0A087WTM6 91 aa15.85■□□□□ 0.13
VARS-217ENST00000440048 M0QY20 66 aa15.85■□□□□ 0.13
VARS-217ENST00000440048 EREGO14944 169 aa15.85■□□□□ 0.13
VARS-217ENST00000440048 SUMO4Q6EEV6 95 aa15.85■□□□□ 0.13
VARS-217ENST00000440048 DAZ4Q86SG3 579 aaKnown RBP15.85■□□□□ 0.13
VARS-217ENST00000440048 LINC01551Q86U37 167 aa15.85■□□□□ 0.13
VARS-217ENST00000440048 NIT1Q86X76 327 aa15.85■□□□□ 0.13
VARS-217ENST00000440048 DAZ3Q9NR90 486 aaKnown RBP15.85■□□□□ 0.13
VARS-217ENST00000440048 LAGE3Q14657 143 aa15.84■□□□□ 0.13
VARS-217ENST00000440048 TWIST1Q15672 202 aa15.84■□□□□ 0.13
VARS-217ENST00000440048 DPH3P1Q9H4G8 78 aa15.84■□□□□ 0.13
VARS-217ENST00000440048 DNAH5Q8TE73 4624 aa15.84■□□□□ 0.13
VARS-217ENST00000440048 TRBV6-8A0A0A6YYG3 113 aa15.83■□□□□ 0.12
VARS-217ENST00000440048 A8MWL6 223 aa15.83■□□□□ 0.12
VARS-217ENST00000440048 URGCP-MRPS24S4R325 110 aa15.83■□□□□ 0.12
VARS-217ENST00000440048 C9JQL5 133 aa15.82■□□□□ 0.12
VARS-217ENST00000440048 H7C1H1 209 aa15.82■□□□□ 0.12
VARS-217ENST00000440048 CT83Q5H943 113 aa15.82■□□□□ 0.12
VARS-217ENST00000440048 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.82■□□□□ 0.12
VARS-217ENST00000440048 PSCAO43653 123 aa15.81■□□□□ 0.12
VARS-217ENST00000440048 DNAJC30Q96LL9 226 aa15.81■□□□□ 0.12
VARS-217ENST00000440048 SRSF3P84103 164 aaKnown RBP15.8■□□□□ 0.12
VARS-217ENST00000440048 PGLYRP4Q96LB8 373 aa15.8■□□□□ 0.12
VARS-217ENST00000440048 A0A087WX48 190 aa15.79■□□□□ 0.12
VARS-217ENST00000440048 FUSP35637 526 aaKnown RBP eCLIP15.79■□□□□ 0.12
VARS-217ENST00000440048 PEA15Q15121 130 aa15.79■□□□□ 0.12
VARS-217ENST00000440048 FAM74A3Q4VXF1 159 aa15.79■□□□□ 0.12
VARS-217ENST00000440048 RASL11AQ6T310 242 aa15.79■□□□□ 0.12
VARS-217ENST00000440048 NTM-AS1Q6ZSK4 140 aa15.79■□□□□ 0.12
VARS-217ENST00000440048 CHCHD7Q9BUK0 85 aa15.79■□□□□ 0.12
VARS-217ENST00000440048 OSTCQ9NRP0 149 aa15.79■□□□□ 0.12
VARS-217ENST00000440048 PGPEP1Q9NXJ5 209 aa15.79■□□□□ 0.12
VARS-217ENST00000440048 TRAV8-3A0A0A6YYJ7 113 aa15.78■□□□□ 0.12
VARS-217ENST00000440048 CDK2AP2O75956 126 aa15.78■□□□□ 0.12
VARS-217ENST00000440048 FOXA3P55318 350 aaPredicted RBP15.78■□□□□ 0.12
VARS-217ENST00000440048 TMEM241Q24JQ0 296 aa15.78■□□□□ 0.12
VARS-217ENST00000440048 TMEM97Q5BJF2 176 aa15.78■□□□□ 0.12
VARS-217ENST00000440048 RYR1P21817 5038 aa15.78■□□□□ 0.12
VARS-217ENST00000440048 LRCOL1A6NCL2 159 aa15.77■□□□□ 0.12
VARS-217ENST00000440048 TMEM262E9PQX1 116 aa15.77■□□□□ 0.12
VARS-217ENST00000440048 TM2D2Q9BX73 214 aa15.77■□□□□ 0.12
VARS-217ENST00000440048 KRTAP17-1Q9BYP8 105 aa15.77■□□□□ 0.12
VARS-217ENST00000440048 KLK12Q9UKR0 248 aa15.77■□□□□ 0.12
VARS-217ENST00000440048 KCNIP4Q6PIL6 250 aa15.76■□□□□ 0.11
VARS-217ENST00000440048 TSKUQ8WUA8 353 aa15.76■□□□□ 0.11
VARS-217ENST00000440048 SMDT1Q9H4I9 107 aa15.76■□□□□ 0.11
VARS-217ENST00000440048 NIT2Q9NQR4 276 aa15.76■□□□□ 0.11
VARS-217ENST00000440048 RPL23P62829 140 aaKnown RBP15.75■□□□□ 0.11
VARS-217ENST00000440048 SMIM15Q7Z3B0 74 aa15.75■□□□□ 0.11
VARS-217ENST00000440048 ISOC2Q96AB3 205 aa15.75■□□□□ 0.11
VARS-217ENST00000440048 CHCHD5Q9BSY4 110 aa15.75■□□□□ 0.11
VARS-217ENST00000440048 PCLOQ9Y6V0 5065 aa15.75■□□□□ 0.11
VARS-217ENST00000440048 ELOBQ15370 118 aa15.74■□□□□ 0.11
VARS-217ENST00000440048 CDPF1Q6NVV7 123 aa15.74■□□□□ 0.11
VARS-217ENST00000440048 C15orf54Q8N8G6 183 aa15.74■□□□□ 0.11
VARS-217ENST00000440048 GFRA4Q9GZZ7 299 aa15.74■□□□□ 0.11
VARS-217ENST00000440048 NAT8Q9UHE5 227 aa15.74■□□□□ 0.11
VARS-217ENST00000440048 HSPG2P98160 4391 aa15.73■□□□□ 0.11
VARS-217ENST00000440048 HIGD1CA8MV81 97 aa15.73■□□□□ 0.11
VARS-217ENST00000440048 GATD1Q8NB37 220 aa15.73■□□□□ 0.11
VARS-217ENST00000440048 V9GYV3 84 aa15.73■□□□□ 0.11
VARS-217ENST00000440048 APOBP04114 4563 aaKnown RBP15.72■□□□□ 0.11
VARS-217ENST00000440048 TRBV25-1A0A075B6N4 114 aa15.72■□□□□ 0.11
VARS-217ENST00000440048 TRAV26-2A0A0B4J265 109 aa15.72■□□□□ 0.11
VARS-217ENST00000440048 FAM231BA6NCW3 169 aa15.72■□□□□ 0.11
VARS-217ENST00000440048 ADIRFQ15847 76 aa15.72■□□□□ 0.11
VARS-217ENST00000440048 MPV17L2Q567V2 206 aa15.72■□□□□ 0.11
VARS-217ENST00000440048 UBE2WQ96B02 151 aa15.72■□□□□ 0.11
VARS-217ENST00000440048 BORCS7Q96B45 105 aa15.72■□□□□ 0.11
VARS-217ENST00000440048 PKIAP61925 76 aa15.71■□□□□ 0.11
VARS-217ENST00000440048 IQCJQ1A5X6 159 aa15.71■□□□□ 0.11
VARS-217ENST00000440048 IGHV1-24A0A0C4DH33 117 aa15.7■□□□□ 0.1
VARS-217ENST00000440048 A0A1B0GUT8 65 aa15.7■□□□□ 0.1
VARS-217ENST00000440048 ATRAIDQ6UW56 229 aa15.7■□□□□ 0.1
VARS-217ENST00000440048 FRZBQ92765 325 aa15.7■□□□□ 0.1
VARS-217ENST00000440048 RMI2Q96E14 147 aa15.7■□□□□ 0.1
VARS-217ENST00000440048 GAGE6Q13070 117 aa15.69■□□□□ 0.1
VARS-217ENST00000440048 Q8N976 141 aa15.69■□□□□ 0.1
VARS-217ENST00000440048 COX11Q9Y6N1 276 aa15.69■□□□□ 0.1
VARS-217ENST00000440048 IGKV2D-24A0A075B6R9 120 aa15.68■□□□□ 0.1
VARS-217ENST00000440048 WFDC2Q14508 124 aa15.68■□□□□ 0.1
VARS-217ENST00000440048 Q8N814 137 aa15.68■□□□□ 0.1
VARS-217ENST00000440048 MAPKAPK5-AS1Q8N8E1 139 aa15.68■□□□□ 0.1
VARS-217ENST00000440048 ANGP03950 147 aaKnown RBP15.67■□□□□ 0.1
VARS-217ENST00000440048 Q0VG73 95 aa15.67■□□□□ 0.1
VARS-217ENST00000440048 NUP35Q8NFH5 326 aa15.67■□□□□ 0.1
VARS-217ENST00000440048 DEFB104AQ8WTQ1 72 aa15.67■□□□□ 0.1
VARS-217ENST00000440048 RPL39LQ96EH5 51 aaKnown RBP15.67■□□□□ 0.1
VARS-217ENST00000440048 RAB14P61106 215 aa15.66■□□□□ 0.1
VARS-217ENST00000440048 RBX1P62877 108 aa15.66■□□□□ 0.1
VARS-217ENST00000440048 ENHOQ6UWT2 76 aa15.66■□□□□ 0.1
VARS-217ENST00000440048 TMEM243Q9BU79 118 aa15.65■□□□□ 0.1
VARS-217ENST00000440048 TMEM191AQ9H0A3 160 aa15.65■□□□□ 0.1
VARS-217ENST00000440048 LECT2O14960 151 aa15.64■□□□□ 0.09
VARS-217ENST00000440048 CRPP02741 224 aa15.64■□□□□ 0.09
VARS-217ENST00000440048 COTL1Q14019 142 aa15.64■□□□□ 0.09
VARS-217ENST00000440048 NTN5Q8WTR8 489 aaPredicted RBP15.64■□□□□ 0.09
VARS-217ENST00000440048 BAALCQ8WXS3 180 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms